Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq8 111 1e-19 seq6 111 1e-19 >seq8 Length=1778692 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || ||||| | ||||| | || || || || ||| Sbjct 1641294 ATGCAGATTTTTGTCAAGACCCTTACGGGTAAGACTATCACCTTAGAGGTTGAATCTTCT 1641353 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| ||||| ||||| || |||||||||| Sbjct 1641354 GACACCATCGA--CAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATCCCACCTGACC 1641411 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | || | | || || || || || ||||| ||||||| | ||| || ||| |||| Sbjct 1641412 AGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGTCCGACTACA 1641471 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | |||||||| |||||||| || || || || | || | ||||| || Sbjct 1641472 ACATTCAAAAGGAATCCACCCTGCACTTGGTCTTGAGATTGAGAGGTGG 1641520 Score = 107 bits (118), Expect = 2e-18 Identities = 157/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 ||||| ||||| ||||| ||||| ||||||| | ||||| || || || ||||| || Sbjct 71206 TTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATT 71265 Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125 || || || ||| || ||| ||||| ||||| ||||| ||||||||||| | Sbjct 71266 GA--CAATGTCAAGTCGAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAACAAAGAT 71323 Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185 | || ||||| || || ||||| ||||||| | ||| || || ||||| || |||| Sbjct 71324 TGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTACAACATCCAAA 71383 Query 25186 AAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || ||||| || || || || | || | ||||| || Sbjct 71384 AGGAGTCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 71423 >seq6 Length=1501435 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || | || || |||| || || || || Sbjct 434267 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434208 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| ||||| | || | ||| |||||||| || || || || ||||| Sbjct 434207 GACACTATCGATAATGTGAAGTCCAAGATTCAG-GACAAAGAGGGTATCCCTCCAGACCA 434149 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | ||||| || |||||||| || ||||||| | | || || |||||||| Sbjct 434148 ACAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAA 434089 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||||||||| || || || ||||| | | | |||||||| Sbjct 434088 CATTCAAAAAGAATCAACTCTGCACTTAGTCTTGCGTTTGAGAGGAGG 434041 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| || || | || || || | || || |||| || || || || Sbjct 435265 AATGCAGATTTTTGTCAAAACCCTTACGGGAAAGACGATTACTCTCGAGGTTGAATCCTC 435206 Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||| ||||| ||||| | || | ||| |||||||| || || || || |||| Sbjct 435205 TGACACCATCGATAATGTGAAGTCCAAGATTCAG-GACAAAGAGGGTATCCCTCCAGACC 435147 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | ||||| || |||||||| || ||||||| | | || || ||||||| Sbjct 435146 AACAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACA 435087 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | |||||||||||||| || | || ||||| | | || ||||| || Sbjct 435086 ACATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGAGAGGTGG 435038 Score = 105 bits (116), Expect = 6e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || | || || |||| || || || || Sbjct 435036 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434977 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| ||||| | || | ||| |||||||| || || || || ||||| Sbjct 434976 GACACTATCGATAATGTGAAGTCCAAGATTCAG-GACAAAGAGGGTATCCCTCCAGACCA 434918 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | ||||| || |||||||| || ||||||| | | || || |||||||| Sbjct 434917 ACAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAA 434858 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGT 25207 |||||||||||||| || | || ||||| Sbjct 434857 CATTCAAAAAGAATCAACTTTGCACTTAGT 434828 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151 ||||| || || || || || || || ||| || |||| ||||| ||||| || |||||| Sbjct 434402 GACAAGGAGGGTATCCCTCCGGATCAGCAGAGGCTTATCTTTGCTGGCAAGCAGTTAGAA 434343 Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 |||| | | || || |||||||| |||||||||||||| || | || ||||| | Sbjct 434342 GATGGTAGAACATTGTCTGATTACAACATTCAAAAAGAATCAACTTTGCACTTAGTCTTG 434283 Query 25212 AGGCTAAGAGGAGG 25225 | || ||||| || Sbjct 434282 CGTCTGAGAGGTGG 434269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327957750520