Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq8 111 1e-19
seq6 111 1e-19
>seq8
Length=1778692
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| ||||| | || ||||| | ||||| | || || || || |||
Sbjct 1641294 ATGCAGATTTTTGTCAAGACCCTTACGGGTAAGACTATCACCTTAGAGGTTGAATCTTCT 1641353
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| ||||| || || ||| || ||| ||||| ||||| || ||||||||||
Sbjct 1641354 GACACCATCGA--CAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATCCCACCTGACC 1641411
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || | | || || || || || ||||| ||||||| | ||| || ||| ||||
Sbjct 1641412 AGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGTCCGACTACA 1641471
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| |||||||| |||||||| || || || || | || | ||||| ||
Sbjct 1641472 ACATTCAAAAGGAATCCACCCTGCACTTGGTCTTGAGATTGAGAGGTGG 1641520
Score = 107 bits (118), Expect = 2e-18
Identities = 157/220 (71%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
||||| ||||| ||||| ||||| ||||||| | ||||| || || || ||||| ||
Sbjct 71206 TTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATT 71265
Query 25068 GAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGA 25125
|| || || ||| || ||| ||||| ||||| ||||| ||||||||||| |
Sbjct 71266 GA--CAATGTCAAGTCGAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAACAAAGAT 71323
Query 25126 TTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAA 25185
| || ||||| || || ||||| ||||||| | ||| || || ||||| || ||||
Sbjct 71324 TGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTACAACATCCAAA 71383
Query 25186 AAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || ||||| || || || || | || | ||||| ||
Sbjct 71384 AGGAGTCCACTCTTCACTTGGTCTTGAGATTGAGAGGTGG 71423
>seq6
Length=1501435
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || || | || || |||| || || || ||
Sbjct 434267 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434208
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||||||||| ||||| | || | ||| |||||||| || || || || |||||
Sbjct 434207 GACACTATCGATAATGTGAAGTCCAAGATTCAG-GACAAAGAGGGTATCCCTCCAGACCA 434149
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | | ||||| || |||||||| || ||||||| | | || || ||||||||
Sbjct 434148 ACAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAA 434089
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||||||||||| || || || ||||| | | | ||||||||
Sbjct 434088 CATTCAAAAAGAATCAACTCTGCACTTAGTCTTGCGTTTGAGAGGAGG 434041
Score = 109 bits (120), Expect = 5e-19
Identities = 163/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| || || | || || || | || || |||| || || || ||
Sbjct 435265 AATGCAGATTTTTGTCAAAACCCTTACGGGAAAGACGATTACTCTCGAGGTTGAATCCTC 435206
Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||| ||||| ||||| | || | ||| |||||||| || || || || ||||
Sbjct 435205 TGACACCATCGATAATGTGAAGTCCAAGATTCAG-GACAAAGAGGGTATCCCTCCAGACC 435147
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | ||||| || |||||||| || ||||||| | | || || |||||||
Sbjct 435146 AACAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACA 435087
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| |||||||||||||| || | || ||||| | | || ||||| ||
Sbjct 435086 ACATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGAGAGGTGG 435038
Score = 105 bits (116), Expect = 6e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || || | || || |||| || || || ||
Sbjct 435036 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434977
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||||||||| ||||| | || | ||| |||||||| || || || || |||||
Sbjct 434976 GACACTATCGATAATGTGAAGTCCAAGATTCAG-GACAAAGAGGGTATCCCTCCAGACCA 434918
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | | ||||| || |||||||| || ||||||| | | || || ||||||||
Sbjct 434917 ACAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAA 434858
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGT 25207
|||||||||||||| || | || |||||
Sbjct 434857 CATTCAAAAAGAATCAACTTTGCACTTAGT 434828
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 25092 GACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAA 25151
||||| || || || || || || || ||| || |||| ||||| ||||| || ||||||
Sbjct 434402 GACAAGGAGGGTATCCCTCCGGATCAGCAGAGGCTTATCTTTGCTGGCAAGCAGTTAGAA 434343
Query 25152 GATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211
|||| | | || || |||||||| |||||||||||||| || | || ||||| |
Sbjct 434342 GATGGTAGAACATTGTCTGATTACAACATTCAAAAAGAATCAACTTTGCACTTAGTCTTG 434283
Query 25212 AGGCTAAGAGGAGG 25225
| || ||||| ||
Sbjct 434282 CGTCTGAGAGGTGG 434269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327957750520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |