Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq6 93.3 4e-14 >seq6 Length=1501435 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111185 AAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCA 111244 ||||||| |||||||||||||| | || || || || ||||| | || ||| || Sbjct 435266 AAATGCAGATTTTTGTCAAAACCCTTACGGGAAAGACGATTACTCTCGAGGTTGAATCCT 435207 Query 111245 GCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATC 111304 || | | | | || || || ||| |||||||| || | || || | Sbjct 435206 CTGACACCATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACC 435147 Query 111305 AACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 111364 ||||||| | |||| || |||||||| ||||||||| || ||| || | ||||| | Sbjct 435146 AACAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACA 435087 Query 111365 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 | || ||||||||||| || | || ||||| ||||||||| | ||||| Sbjct 435086 ACATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGAGAGGTGG 435038 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 111301 GATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 111360 ||||| || |||||||| | ||| ||||| || || |||||| || ||| || | ||| Sbjct 434381 GATCAGCAGAGGCTTATCTTTGCTGGCAAGCAGTTAGAAGATGGTAGAACATTGTCTGAT 434322 Query 111361 TATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || || || ||||||||||| || | || ||||| ||||||||| | ||||| Sbjct 434321 TACAACATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGAGAGGTGG 434269 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 111280 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111339 |||||||| || | || || |||||||| | |||| || |||||||| |||||| Sbjct 434174 GACAAAGAGGGTATCCCTCCAGACCAACAAAGATTGATTTTCGCTGGCAAACAGTTGGAA 434115 Query 111340 GATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111399 ||| || ||| || | ||||| || || ||||||||||| || || || ||||| ||| Sbjct 434114 GATGGTAGAACCTTGTCGGATTACAACATTCAAAAAGAATCAACTCTGCACTTAGTCTTG 434055 Query 111400 CGTCTGCGCGGTGG 111413 ||| || | || || Sbjct 434054 CGTTTGAGAGGAGG 434041 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 111280 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111339 |||||||| || | || || |||||||| | |||| || |||||||| |||||| Sbjct 434943 GACAAAGAGGGTATCCCTCCAGACCAACAAAGATTGATTTTCGCTGGCAAACAGTTGGAA 434884 Query 111340 GATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111399 ||| || ||| || | ||||| || || ||||||||||| || | || ||||| ||| Sbjct 434883 GATGGTAGAACCTTGTCGGATTACAACATTCAAAAAGAATCAACTTTGCACTTAGTCTTG 434824 Query 111400 CGTCTGCGCGGTGG 111413 ||| || | ||||| Sbjct 434823 CGTTTGAGAGGTGG 434810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423039958753600