Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq8 187 5e-42
seq6 172 1e-37
>seq8
Length=1778692
Score = 187 bits (206), Expect = 5e-42
Identities = 169/213 (79%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || ||||| || ||||| ||||| || ||||| | || || |||||
Sbjct 1641506 CAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTTCCATC 1641447
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || ||||| || | |||||| ||||| ||||| || |||||||||||
Sbjct 1641446 TTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGGATACCTTCCTTGTC 1641387
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| ||||| | |||||| ||||||||||| | ||||| || || |||||||| ||
Sbjct 1641386 CTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAAGATTCAACCTCTAAGGTGATAGT 1641327
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| ||||| ||||||||||| || ||||||||
Sbjct 1641326 CTTACCCGTAAGGGTCTTGACAAAAATCTGCAT 1641294
Score = 174 bits (192), Expect = 3e-38
Identities = 161/204 (79%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308
||| |||||||| || |||||||| ||||||||||| || || || | || || |||||
Sbjct 71409 CAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATC 71350
Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
||| || ||||| || || || || | |||||||||||| || ||||| |||||||||||
Sbjct 71349 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTC 71290
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
|| ||||| | |||||| || |||||||| | ||||| |||||||| ||||||||
Sbjct 71289 CTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGT 71230
Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || | ||||||||| ||
Sbjct 71229 CTTACCAGTCAAGGTCTTGACAAA 71206
>seq6
Length=1501435
Score = 172 bits (190), Expect = 1e-37
Identities = 167/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306
||||| || ||||| || || || |||||||| ||||| ||||| || | || || |||
Sbjct 434053 CGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCA 434112
Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366
||||| ||||| || || ||||| || | |||||||||||| || || || || || |||
Sbjct 434113 TCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTG 434172
Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426
|| |||||||| | ||| || ||||| ||||| | ||||| || || | || ||
Sbjct 434173 TCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATC 434232
Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| ||||||||||||||||||||||| ||||||||
Sbjct 434233 GTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267
Score = 167 bits (184), Expect = 4e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306
||||| || ||||| | || || |||||||| ||||| ||||| || | || || |||
Sbjct 434822 CGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCA 434881
Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366
||||| ||||| || || ||||| || | |||||||||||| || || || || || |||
Sbjct 434882 TCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTG 434941
Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426
|| |||||||| | ||| || ||||| ||||| | ||||| || || | || ||
Sbjct 434942 TCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATC 435001
Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| ||||||||||||||||||||||| ||||||||
Sbjct 435002 GTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036
Score = 161 bits (178), Expect = 2e-34
Identities = 167/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| ||||| || ||||| | || || |||||||| ||||| ||||| || | || ||
Sbjct 435047 AGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTA 435106
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
|||||||| ||||| || || ||||| || | |||||||||||| || || || || ||
Sbjct 435107 CCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCT 435166
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
||||| |||||||| | ||| || ||||||||||| | ||||| || || | ||
Sbjct 435167 TTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACCTCGAGAGTA 435226
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| || |||||||| ||||| ||||| || |||||||||
Sbjct 435227 ATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCATT 435265
Score = 109 bits (120), Expect = 1e-18
Identities = 110/143 (77%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303
|| ||||| || ||||| | || || |||||||| ||||| ||||| || | ||| ||
Sbjct 434278 AGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCAGACAATGTTCTA 434337
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
||||||||||||||||| || || || || || || || || || || || || || |||
Sbjct 434338 CCATCTTCTAACTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATACCCTCC 434397
Query 68364 TTGTCTTGAATCTTTGCCTTGAC 68386
||||| |||||||| | ||| ||
Sbjct 434398 TTGTCCTGAATCTTGGACTTCAC 434420
Score = 93.3 bits (102), Expect = 8e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417
|| |||||||| |||||||| | ||| || ||||||||||| | ||||| || ||
Sbjct 434705 CCCTCCTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACCTCG 434764
Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || || || ||||||||||||||||||||||| ||||||||
Sbjct 434765 AGAGTAATTGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434808
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921622307837760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |