Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq8 187 5e-42 seq6 172 1e-37 >seq8 Length=1778692 Score = 187 bits (206), Expect = 5e-42 Identities = 169/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || ||||| || ||||| ||||| || ||||| | || || ||||| Sbjct 1641506 CAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTTCCATC 1641447 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || ||||| || | |||||| ||||| ||||| || ||||||||||| Sbjct 1641446 TTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGGATACCTTCCTTGTC 1641387 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | |||||| ||||||||||| | ||||| || || |||||||| || Sbjct 1641386 CTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAAGATTCAACCTCTAAGGTGATAGT 1641327 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| ||||||||||| || |||||||| Sbjct 1641326 CTTACCCGTAAGGGTCTTGACAAAAATCTGCAT 1641294 Score = 174 bits (192), Expect = 3e-38 Identities = 161/204 (79%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || |||||||| ||||||||||| || || || | || || ||||| Sbjct 71409 CAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATC 71350 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 ||| || ||||| || || || || | |||||||||||| || ||||| ||||||||||| Sbjct 71349 TTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTC 71290 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | |||||| || |||||||| | ||||| |||||||| |||||||| Sbjct 71289 CTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGT 71230 Query 68429 TTTTCCCGTGAGGGTCTTGACGAA 68452 || || || | ||||||||| || Sbjct 71229 CTTACCAGTCAAGGTCTTGACAAA 71206 >seq6 Length=1501435 Score = 172 bits (190), Expect = 1e-37 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 ||||| || ||||| || || || |||||||| ||||| ||||| || | || || ||| Sbjct 434053 CGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCA 434112 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 ||||| ||||| || || ||||| || | |||||||||||| || || || || || ||| Sbjct 434113 TCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTG 434172 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 || |||||||| | ||| || ||||| ||||| | ||||| || || | || || Sbjct 434173 TCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATC 434232 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||||||||||||||||||||| |||||||| Sbjct 434233 GTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267 Score = 167 bits (184), Expect = 4e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306 ||||| || ||||| | || || |||||||| ||||| ||||| || | || || ||| Sbjct 434822 CGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCA 434881 Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366 ||||| ||||| || || ||||| || | |||||||||||| || || || || || ||| Sbjct 434882 TCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTG 434941 Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426 || |||||||| | ||| || ||||| ||||| | ||||| || || | || || Sbjct 434942 TCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATC 435001 Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||||||||||||||||||||| |||||||| Sbjct 435002 GTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036 Score = 161 bits (178), Expect = 2e-34 Identities = 167/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || ||||| || ||||| | || || |||||||| ||||| ||||| || | || || Sbjct 435047 AGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTA 435106 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| ||||| || || ||||| || | |||||||||||| || || || || || Sbjct 435107 CCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCT 435166 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| |||||||| | ||| || ||||||||||| | ||||| || || | || Sbjct 435167 TTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACCTCGAGAGTA 435226 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || || |||||||| ||||| ||||| || ||||||||| Sbjct 435227 ATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCATT 435265 Score = 109 bits (120), Expect = 1e-18 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || ||||| || ||||| | || || |||||||| ||||| ||||| || | ||| || Sbjct 434278 AGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCAGACAATGTTCTA 434337 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 ||||||||||||||||| || || || || || || || || || || || || || ||| Sbjct 434338 CCATCTTCTAACTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATACCCTCC 434397 Query 68364 TTGTCTTGAATCTTTGCCTTGAC 68386 ||||| |||||||| | ||| || Sbjct 434398 TTGTCCTGAATCTTGGACTTCAC 434420 Score = 93.3 bits (102), Expect = 8e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || |||||||| |||||||| | ||| || ||||||||||| | ||||| || || Sbjct 434705 CCCTCCTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACCTCG 434764 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || || ||||||||||||||||||||||| |||||||| Sbjct 434765 AGAGTAATTGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622307837760