Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq6 122 7e-23 seq8 102 7e-17 >seq6 Length=1501435 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || | ||| ||||| || | || ||||||||||||||||||||||| Sbjct 435035 ATACCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCC 435094 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | | |||||| | ||||| |||||| | || | | |||||||| ||| Sbjct 435095 GACAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGA 435154 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || |||||||| |||||| || | | || | |||||| | |||||| Sbjct 435155 GGGATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCA 435214 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||| || || || || ||||| |||||||||||||| Sbjct 435215 ACCTCGAGAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCAT 435264 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 114170 CAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATC 114229 ||| ||||| || | || ||||||||||||||||||||||| || || | | ||| Sbjct 434055 CAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATC 434114 Query 114230 TTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289 ||| | ||||| |||||| | || | | |||||||| ||||| || || |||||||| Sbjct 434115 TTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTC 434174 Query 114290 GGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGT 114349 |||||| || | | || | ||||||| ||||| || || | || | ||| Sbjct 434175 CTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGT 434234 Query 114350 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || || || || || ||||||||||| Sbjct 434235 CTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 114170 CAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATC 114229 ||| ||||| || | || ||||||||||||||||||||||| || || | | ||| Sbjct 434824 CAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATC 434883 Query 114230 TTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289 ||| | ||||| |||||| | || | | |||||||| ||||| || || |||||||| Sbjct 434884 TTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTC 434943 Query 114290 GGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGT 114349 |||||| || | | || | ||||||| ||||| || || | || | ||| Sbjct 434944 CTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGT 435003 Query 114350 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || || || || || ||||||||||| Sbjct 435004 CTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || | || | ||| ||||| || | || ||||||||||||||||||||||| Sbjct 434266 ATACCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCA 434325 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | | |||||| | || || ||||| |||| || | ||| || |||||| Sbjct 434326 GACAATGTTCTACCATCTTCTAACTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCCGGA 434385 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTT 114298 || || || || ||||| |||||| Sbjct 434386 GGGATACCCTCCTTGTCCTGAATCTT 434411 >seq8 Length=1778692 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 114167 TCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGA 114226 |||||| || || || | || ||||| |||||||||||||| ||| || ||| | Sbjct 1641509 TCTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTTCC 1641450 Query 114227 ATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTT 114286 |||||| | ||| ||||||||| |||| | | || ||||| || || || ||||| || Sbjct 1641449 ATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGGATACCTTCCTT 1641390 Query 114287 GTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCAC 114346 ||| ||||| || | | || | |||||| | ||||| || || | ||| | Sbjct 1641389 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAAGATTCAACCTCTAAGGTGAT 1641330 Query 114347 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || || || || || |||||||||||||| Sbjct 1641329 AGTCTTACCCGTAAGGGTCTTGACAAAAATCTGCAT 1641294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134359036896