Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq8 98.7 1e-15 seq6 89.7 5e-13 >seq8 Length=1778692 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 132829 ACAAACACGCAAAGTTTGTATGCAAACCTTCGTCTCTTGATATAAGCTCGTTGCTGAACG 132888 |||| ||||| |||| ||| ||||||||||||||||| | ||||||||||| ||||| Sbjct 705676 ACAAGCACGCGAAGTCTGTGTGCAAACCTTCGTCTCTGCAAATAAGCTCGTTCGAGAACG 705617 Query 132889 TGAGGCCGGGCATGATGCCTTTTGTTTTAATAAAAAATATTGCCGCAAAACTGCCCGAAA 132948 |||| |||||||| | || || |||| | | || || |||||||| || || | Sbjct 705616 TGAGTCCGGGCATAAGACCCTTCTTTTTCAACCAGAAAATGGCCGCAAACGAACCTGAGA 705557 Query 132949 AGAACACGCCTTCTACA 132965 | ||||| ||||| ||| Sbjct 705556 AAAACACACCTTCGACA 705540 >seq6 Length=1501435 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||||||||||||||||||||| | | ||| | | ||||| | ||| ||||| Sbjct 435068 GTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTCCAACTGTTTGCCA 435127 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| | | || ||||| ||||| || || ||||| || || || || ||| Sbjct 435128 GCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTGAATCTTGGACTTC 435187 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || ||| || || || || | ||| | ||||| || || | ||| Sbjct 435188 ACATTATCGATGGTGTCAGAGGATTCAACCTCGAGAGTAATCGTCTTTCCCGTAAGGGTT 435247 Query 64427 TTTACGAAAATTTGCATTT 64445 || || ||||| ||||||| Sbjct 435248 TTGACAAAAATCTGCATTT 435266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644750035520