Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq8 141 9e-29
seq6 89.7 5e-13
>seq8
Length=1778692
Score = 141 bits (156), Expect = 9e-29
Identities = 298/438 (68%), Gaps = 11/438 (3%)
Strand=Plus/Plus
Query 52404 GTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTAC 52463
|| || |||||| ||||| || |||||||| || || ||||| ||||| || |
Sbjct 705526 GTAGCGTTCGCCGCTGTCGAAGGTGTGTTTTTCTCAGGTTCGTTTGCGGCCATTTTCTGG 705585
Query 52464 ATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGAC 52523
| |||| ||| || | |||||||| || |||||| |||||| | || | | |||
Sbjct 705586 TTGAAAAAGAAGGGTCTTATGCCCGGACTCACGTTCTCGAACGAGCTTATTTGCAGAGAC 705645
Query 52524 GAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTG 52583
||||| ||||||| ||||| |||||| | | | ||| | ||| | ||
Sbjct 705646 GAAGGTTTGCACACAGACTTCGCGTGCTTGTTGTTTG---CGCACTTGAAAAACAAGCCA 705702
Query 52584 GATTCGGACACGATCCT-GAGC--ATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTT 52640
||| | || |||| | || | || ||| |||||| || | |||||||| |
Sbjct 705703 GATCC---CAAGATCGTCGAACGAATCATCACGGAGGCTGTCGAGATCGAAAAAAGATAC 705759
Query 52641 TTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTAC 52700
|| | | ||||||||||||| | | || || |||||||| | |||| | ||||
Sbjct 705760 TTCATCGACGCGCTGCCGGTCTCGTTACTCGGTATGAACGCAGACCTCATGAACCAGTAT 705819
Query 52701 ATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCC-AAAGTACTTCAACGC 52759
| || ||||| || || | || | ||| |||| || |||| |||| |||||||
Sbjct 705820 GTGGAATTTGTCGCTGACAGATTGCTCGTGGCGCTC-GGAAGCCAAAAGGTTTTCAACGT 705878
Query 52760 TCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGA 52819
|||||| || || |||||| | ||||| || |||| ||||||||||||||||||||
Sbjct 705879 GACCAATCCTTTCGACTTTATGGAAAACATCTCTCTTGCCGGCAAGACCAACTTTTTCGA 705938
Query 52820 GAAGCGAGTCGGCGAGTA 52837
||| ||||| ||| ||
Sbjct 705939 GAAAAGAGTCTCCGACTA 705956
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || || | | | || ||||||||||||||||||||| |
Sbjct 1641520 CCACCTCTCAATCTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGAC 1641461
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| | || || | ||| ||||| | |||| | | || ||||| || ||
Sbjct 1641460 AAAGTTCTTCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGG 1641401
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|||||||| ||||| ||| || || | ||||| | | |||||| | || || ||
Sbjct 1641400 ATACCTTCCTTGTCCTGGATCTTGGACTTGACATTGT-CGATGGTGTCAGAAGATTCAAC 1641342
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || ||||| || || || || ||||||||||||||
Sbjct 1641341 CTCTAAGGTGATAGTCTTACCCGTAAGGGTCTTGACAAAAATCTGCAT 1641294
Score = 91.5 bits (100), Expect = 1e-13
Identities = 156/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||| | ||| || || || | | ||||||||||| ||||||||||| |
Sbjct 71423 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 71364
Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||| | || | || || | ||| ||||| | | |||| | | |||||||| |||||
Sbjct 71363 AAAGTTCTGCCA-TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGG 71305
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| ||||| ||| || || | |||| || | |||||||| || || |
Sbjct 71304 AATACCTTCCTTGTCCTGGATCTTCGACTTGACATTG-TCAATGGTGTCGGAAGATTCGA 71246
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606
| || | || | || |||||||||| || || ||||||
Sbjct 71245 CTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAAA 71205
>seq6
Length=1501435
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| || |||||| ||||| || | |||| || |||||||||||||| || |
Sbjct 435038 CCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 435097
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | || || | ||||| || | | || | | |||||||| |||||
Sbjct 435098 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 435157
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCAC 138566
||||| |||||||| ||| | || | || | | || | |||||| | || || ||
Sbjct 435158 ATACCCTCTTTGTCC-TGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAAC 435216
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| || | ||| || || || || ||||| ||||||||||||||
Sbjct 435217 CTCGAGAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCAT 435264
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||||||||| ||||| || | |||| || |||||||||||||| || |
Sbjct 434041 CCTCCTCTCAAACGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434100
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | || || | ||||| || | | || | | |||||||| |||||
Sbjct 434101 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 434160
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||||| |||||||| ||| | || | || | | || | ||||||| || || ||
Sbjct 434161 ATACCCTCTTTGTC-CTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAAC 434219
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| || | ||| || || || || || || || |||||||||||
Sbjct 434220 CTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||||||||| ||||| || | |||| || |||||||||||||| || |
Sbjct 434810 CCACCTCTCAAACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434869
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || | || || | ||||| || | | || | | |||||||| |||||
Sbjct 434870 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 434929
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||||| |||||||| ||| | || | || | | || | ||||||| || || ||
Sbjct 434930 ATACCCTCTTTGTC-CTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAAC 434988
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| || | ||| || || || || || || || |||||||||||
Sbjct 434989 CTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262350373760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |