Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq8 141 9e-29 seq6 89.7 5e-13 >seq8 Length=1778692 Score = 141 bits (156), Expect = 9e-29 Identities = 298/438 (68%), Gaps = 11/438 (3%) Strand=Plus/Plus Query 52404 GTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTAC 52463 || || |||||| ||||| || |||||||| || || ||||| ||||| || | Sbjct 705526 GTAGCGTTCGCCGCTGTCGAAGGTGTGTTTTTCTCAGGTTCGTTTGCGGCCATTTTCTGG 705585 Query 52464 ATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGAC 52523 | |||| ||| || | |||||||| || |||||| |||||| | || | | ||| Sbjct 705586 TTGAAAAAGAAGGGTCTTATGCCCGGACTCACGTTCTCGAACGAGCTTATTTGCAGAGAC 705645 Query 52524 GAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTG 52583 ||||| ||||||| ||||| |||||| | | | ||| | ||| | || Sbjct 705646 GAAGGTTTGCACACAGACTTCGCGTGCTTGTTGTTTG---CGCACTTGAAAAACAAGCCA 705702 Query 52584 GATTCGGACACGATCCT-GAGC--ATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTT 52640 ||| | || |||| | || | || ||| |||||| || | |||||||| | Sbjct 705703 GATCC---CAAGATCGTCGAACGAATCATCACGGAGGCTGTCGAGATCGAAAAAAGATAC 705759 Query 52641 TTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTAC 52700 || | | ||||||||||||| | | || || |||||||| | |||| | |||| Sbjct 705760 TTCATCGACGCGCTGCCGGTCTCGTTACTCGGTATGAACGCAGACCTCATGAACCAGTAT 705819 Query 52701 ATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCC-AAAGTACTTCAACGC 52759 | || ||||| || || | || | ||| |||| || |||| |||| ||||||| Sbjct 705820 GTGGAATTTGTCGCTGACAGATTGCTCGTGGCGCTC-GGAAGCCAAAAGGTTTTCAACGT 705878 Query 52760 TCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGA 52819 |||||| || || |||||| | ||||| || |||| |||||||||||||||||||| Sbjct 705879 GACCAATCCTTTCGACTTTATGGAAAACATCTCTCTTGCCGGCAAGACCAACTTTTTCGA 705938 Query 52820 GAAGCGAGTCGGCGAGTA 52837 ||| ||||| ||| || Sbjct 705939 GAAAAGAGTCTCCGACTA 705956 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || || | | | || ||||||||||||||||||||| | Sbjct 1641520 CCACCTCTCAATCTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGAC 1641461 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | || || | ||| ||||| | |||| | | || ||||| || || Sbjct 1641460 AAAGTTCTTCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGG 1641401 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| ||||| ||| || || | ||||| | | |||||| | || || || Sbjct 1641400 ATACCTTCCTTGTCCTGGATCTTGGACTTGACATTGT-CGATGGTGTCAGAAGATTCAAC 1641342 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || ||||| || || || || |||||||||||||| Sbjct 1641341 CTCTAAGGTGATAGTCTTACCCGTAAGGGTCTTGACAAAAATCTGCAT 1641294 Score = 91.5 bits (100), Expect = 1e-13 Identities = 156/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||| | ||| || || || | | ||||||||||| ||||||||||| | Sbjct 71423 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 71364 Query 138448 ATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| | || | || || | ||| ||||| | | |||| | | |||||||| ||||| Sbjct 71363 AAAGTTCTGCCA-TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGG 71305 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| ||||| ||| || || | |||| || | |||||||| || || | Sbjct 71304 AATACCTTCCTTGTCCTGGATCTTCGACTTGACATTG-TCAATGGTGTCGGAAGATTCGA 71246 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAA 138606 | || | || | || |||||||||| || || |||||| Sbjct 71245 CTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAAA 71205 >seq6 Length=1501435 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| || |||||| ||||| || | |||| || |||||||||||||| || | Sbjct 435038 CCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 435097 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || | ||||| || | | || | | |||||||| ||||| Sbjct 435098 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 435157 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGT-TCCACGGTGTCGGTCGACTCCAC 138566 ||||| |||||||| ||| | || | || | | || | |||||| | || || || Sbjct 435158 ATACCCTCTTTGTCC-TGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAAC 435216 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || | ||| || || || || ||||| |||||||||||||| Sbjct 435217 CTCGAGAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCAT 435264 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||||||||| ||||| || | |||| || |||||||||||||| || | Sbjct 434041 CCTCCTCTCAAACGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434100 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || | ||||| || | | || | | |||||||| ||||| Sbjct 434101 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 434160 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| |||||||| ||| | || | || | | || | ||||||| || || || Sbjct 434161 ATACCCTCTTTGTC-CTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAAC 434219 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || | ||| || || || || || || || ||||||||||| Sbjct 434220 CTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||||||||| ||||| || | |||| || |||||||||||||| || | Sbjct 434810 CCACCTCTCAAACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434869 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || | ||||| || | | || | | |||||||| ||||| Sbjct 434870 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 434929 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| |||||||| ||| | || | || | | || | ||||||| || || || Sbjct 434930 ATACCCTCTTTGTC-CTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAAC 434988 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || | ||| || || || || || || || ||||||||||| Sbjct 434989 CTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262350373760