Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq8 105 6e-18 seq6 104 2e-17 >seq8 Length=1778692 Score = 105 bits (116), Expect = 6e-18 Identities = 324/489 (66%), Gaps = 23/489 (5%) Strand=Plus/Plus Query 47085 AAGGCCGAGTGGGCCATGAAGTACATTGAAAACGA--AAACGTCACTCTGGCCGAACGTT 47142 |||||||| ||||| || | | ||| | |||| || ||| || || ||||| Sbjct 705466 AAGGCCGAATGGGCGATCAGATGGATTCAGGACGACGAAGCGTTGTTC--GCGGAACGGC 705523 Query 47143 TGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTT 47202 | | || |||||| ||||| || || || ||||| || |||||||| || || | Sbjct 705524 TCGTAGCGTTCGCCGCTGTCGAAGGTGTGTTTTTCTCAGGTTCGTTTGCGGCCATTTTCT 705583 Query 47203 ACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAG 47262 |||||| || || |||||||||| |||||||| |||||||| || | |||| Sbjct 705584 GGTTGAAAAAGAAGGGTCTTATGCCCGGACTCACGTTCTCGAACGAGCTTATTTGCAGAG 705643 Query 47263 ACGAAGGCCTGCACACCAACTTTGCCTG-TCTCTACTACAACACTAGAGTCGATCAAAAG 47321 ||||||| ||||||| |||| || || | | | |||| || | | ||| Sbjct 705644 ACGAAGGTTTGCACACAGACTTCGCGTGCTTGTTGTTTGCGCACTTGA----AAAACAAG 705699 Query 47322 TTGGACGTGCC--CACCGTC-AGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAG 47378 || | || | |||| | ||| || | | || || |||| || || | Sbjct 705700 CCAGA--TCCCAAGATCGTCGAACGA-ATCATCACGGAGGCTGTCGAGATCGAAAAAAGA 705756 Query 47379 TTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAG 47438 | ||| ||| || ||||| | || ||| | || |||||||| || | |||| || Sbjct 705757 TACTTCATCGACGCGCTGCCGGTCTCGTTACTCGGTATGAACGCAGACCTCATGAACCAG 705816 Query 47439 TACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCC-CAAGATTTACCA 47497 || | ||||||||||| ||| | ||||||| ||| | | || ||| ||| | | Sbjct 705817 TATGTGGAATTTGTCGCTGACAGATTGCTCGTGGCGCT-CGGAAGCCAAAAGGTTTTCAA 705875 Query 47498 C---ACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTT 47554 | ||| ||||| ||||| |||||| | ||||| || || | |||||||||||||| Sbjct 705876 CGTGACC---AATCCTTTCGACTTTATGGAAAACATCTCTCTTGCCGGCAAGACCAACTT 705932 Query 47555 TTTCGAGAA 47563 ||||||||| Sbjct 705933 TTTCGAGAA 705941 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | |||| ||| ||||| || | || || || |||||||| ||||| ||| | Sbjct 1641520 CCACCTCTCAATCTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGAC 1641461 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | ||| || | || || |||||| ||||||||| ||||| || || || Sbjct 1641460 AAAGTTCTTCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGG 1641401 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || ||||||||| ||| || ||||| | |||| |||||| | | || || Sbjct 1641400 ATACCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAAGATTCAACC 1641341 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || || || || || || || |||||||||||||| Sbjct 1641340 TCTAAGGTGATAGTCTTACCCGTAAGGGTCTTGACAAAAATCTGCAT 1641294 >seq6 Length=1501435 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||| || || || | || || ||||||||||| |||||||| || || | | | Sbjct 435050 CGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCA 435109 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || | |||||| |||||| | ||||||| || || || ||||| || ||||| ||| Sbjct 435110 TCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTG 435169 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| || || ||| | | |||| |||||| | || || |||| || | | Sbjct 435170 TCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACCTCGAGAGTAATC 435229 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || ||||| |||||||||||||| Sbjct 435230 GTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCAT 435264 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| | || ||||| || || || | || || ||||||||||| |||||||| | Sbjct 434810 CCACCTCTCAAACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434869 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || | | ||| || | |||||| |||||| | ||||||| || || || ||||| Sbjct 434870 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 434929 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||| |||||| || || ||| | | |||| ||||| | | || || Sbjct 434930 ATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACC 434989 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | ||| || || || || || || || ||||||||||| Sbjct 434990 TCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955 || ||||| || || || | || || ||||||||||| |||||||| || || | | Sbjct 434050 AAACGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTA 434109 Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015 ||| || | |||||| |||||| | ||||||| || || || ||||| || ||||| Sbjct 434110 CCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCT 434169 Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075 |||||| || || ||| | | |||| ||||| | | || || |||| || Sbjct 434170 TTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTA 434229 Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | ||| || || || || || || || ||||||||||| Sbjct 434230 ATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||| || || || | || || ||||||||||| |||||||| || || | | | Sbjct 434281 CGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCAGACAATGTTCTACCA 434340 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || |||| ||| || ||||| |||| | | ||||||||| ||||| || ||||||||| Sbjct 434341 TCTTCTAACTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATACCCTCCTTG 434400 Query 127019 TCC 127021 ||| Sbjct 434401 TCC 434403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500752449920