Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq6 123 2e-23 seq5 114 1e-20 seq8 102 7e-17 >seq6 Length=1501435 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187 ||| |||| ||||| |||||||| ||||| || || ||||| | |||| || ||| Sbjct 434055 CAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATC 434114 Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247 ||||| ||||| || ||| | ||||||| ||| ||||| || || || || ||||| || Sbjct 434115 TTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTC 434174 Query 45248 TTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307 ||||| || || | || | ||||||||||| || || |||||||||| ||| Sbjct 434175 CTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGT 434234 Query 45308 TTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || || ||||| ||||| Sbjct 434235 CTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187 ||| |||| |||| |||||||| ||||| || || ||||| | |||| || ||| Sbjct 434824 CAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATC 434883 Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247 ||||| ||||| || ||| | ||||||| ||| ||||| || || || || ||||| || Sbjct 434884 TTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTC 434943 Query 45248 TTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307 ||||| || || | || | ||||||||||| || || |||||||||| ||| Sbjct 434944 CTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGT 435003 Query 45308 TTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || || || || ||||| ||||| Sbjct 435004 CTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036 >seq5 Length=1414338 Score = 114 bits (126), Expect = 1e-20 Identities = 192/278 (69%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 122899 AGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCG 122958 |||||||||||||| ||||| | ||||||| || || | ||| | |||||| | Sbjct 885049 AGGTCGCCGAACGTCCACAACACCTTGTCATGCGTGTTGCCGTCGGCATACACGGAACCA 885108 Query 122959 ACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGA 123018 | || ||||| | || ||| |||||| || | ||||| | | || ||| ||||| || Sbjct 885109 ATATTGAAAAGGTGATCGAGACTTACAATCTAATGTCCCTCAGATATTTTACGCATGCCT 885168 Query 123019 GTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCA 123078 || || | ||| ||| || ||| | |||||| |||| || ||||||||| || Sbjct 885169 CGCCAACCCTTTTCAACGCTGGTACGCCGCACCCTCAGATGTCGTCCTGTTTTTTGGTCG 885228 Query 123079 CCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTT 123138 || || || ||| |||| |||||||| || |||||| || || || |||||| Sbjct 885229 CCATGAAGGATGACTCCATCGAGGGTATCTACGATACTTTGAAAGAGTGTGCAATGATTT 885288 Query 123139 CCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGAC 123176 |||| || |||||| || || || || | ||| || Sbjct 885289 CCAAGACTGCCGGCGGTATCGGATTGCACATTCACAAC 885326 >seq8 Length=1778692 Score = 102 bits (112), Expect = 7e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | ||||| || ||||||||||| || || || ||| | ||| | | Sbjct 1641508 CTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTTCCA 1641449 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || ||| | ||||||| ||||||||| || || || ||||| || Sbjct 1641448 TCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGGATACCTTCCTTG 1641389 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 || || || || |||| || | |||||| ||||| || || || | || | Sbjct 1641388 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAAGATTCAACCTCTAAGGTGATA 1641329 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || || || || || |||||||| |||||| Sbjct 1641328 GTCTTACCCGTAAGGGTCTTGACAAAAATCTGCATC 1641293 Score = 89.7 bits (98), Expect = 5e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 ||||| || | || || || || ||||||||||| || || || | ||| | | Sbjct 71411 CTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCA 71352 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| || Sbjct 71351 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTG 71292 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 || || || || |||| || | |||||||||||| |||||||| | ||| | Sbjct 71291 TCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATG 71232 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAA 45332 || || || || | || || |||||| Sbjct 71231 GTCTTACCAGTCAAGGTCTTGACAAAA 71205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003154799680