Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq6 123 2e-23
seq5 114 1e-20
seq8 102 7e-17
>seq6
Length=1501435
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187
||| |||| ||||| |||||||| ||||| || || ||||| | |||| || |||
Sbjct 434055 CAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATC 434114
Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247
||||| ||||| || ||| | ||||||| ||| ||||| || || || || ||||| ||
Sbjct 434115 TTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTC 434174
Query 45248 TTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307
||||| || || | || | ||||||||||| || || |||||||||| |||
Sbjct 434175 CTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGT 434234
Query 45308 TTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || || ||||| |||||
Sbjct 434235 CTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267
Score = 118 bits (130), Expect = 1e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187
||| |||| |||| |||||||| ||||| || || ||||| | |||| || |||
Sbjct 434824 CAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATC 434883
Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247
||||| ||||| || ||| | ||||||| ||| ||||| || || || || ||||| ||
Sbjct 434884 TTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTC 434943
Query 45248 TTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGT 45307
||||| || || | || | ||||||||||| || || |||||||||| |||
Sbjct 434944 CTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGT 435003
Query 45308 TTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || || || || ||||| |||||
Sbjct 435004 CTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036
>seq5
Length=1414338
Score = 114 bits (126), Expect = 1e-20
Identities = 192/278 (69%), Gaps = 0/278 (0%)
Strand=Plus/Plus
Query 122899 AGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCG 122958
|||||||||||||| ||||| | ||||||| || || | ||| | |||||| |
Sbjct 885049 AGGTCGCCGAACGTCCACAACACCTTGTCATGCGTGTTGCCGTCGGCATACACGGAACCA 885108
Query 122959 ACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGA 123018
| || ||||| | || ||| |||||| || | ||||| | | || ||| ||||| ||
Sbjct 885109 ATATTGAAAAGGTGATCGAGACTTACAATCTAATGTCCCTCAGATATTTTACGCATGCCT 885168
Query 123019 GTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCA 123078
|| || | ||| ||| || ||| | |||||| |||| || ||||||||| ||
Sbjct 885169 CGCCAACCCTTTTCAACGCTGGTACGCCGCACCCTCAGATGTCGTCCTGTTTTTTGGTCG 885228
Query 123079 CCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTT 123138
|| || || ||| |||| |||||||| || |||||| || || || ||||||
Sbjct 885229 CCATGAAGGATGACTCCATCGAGGGTATCTACGATACTTTGAAAGAGTGTGCAATGATTT 885288
Query 123139 CCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGAC 123176
|||| || |||||| || || || || | ||| ||
Sbjct 885289 CCAAGACTGCCGGCGGTATCGGATTGCACATTCACAAC 885326
>seq8
Length=1778692
Score = 102 bits (112), Expect = 7e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | ||||| || ||||||||||| || || || ||| | ||| | |
Sbjct 1641508 CTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTTCCA 1641449
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || ||| | ||||||| ||||||||| || || || ||||| ||
Sbjct 1641448 TCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGGATACCTTCCTTG 1641389
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|| || || || |||| || | |||||| ||||| || || || | || |
Sbjct 1641388 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAAGATTCAACCTCTAAGGTGATA 1641329
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || || || || || |||||||| ||||||
Sbjct 1641328 GTCTTACCCGTAAGGGTCTTGACAAAAATCTGCATC 1641293
Score = 89.7 bits (98), Expect = 5e-13
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || || || || ||||||||||| || || || | ||| | |
Sbjct 71411 CTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCA 71352
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 71351 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTG 71292
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|| || || || |||| || | |||||||||||| |||||||| | ||| |
Sbjct 71291 TCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATG 71232
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAA 45332
|| || || || | || || ||||||
Sbjct 71231 GTCTTACCAGTCAAGGTCTTGACAAAA 71205
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452003154799680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |