Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq5 230 3e-55 seq8 95.1 1e-14 >seq5 Length=1414338 Score = 230 bits (254), Expect = 3e-55 Identities = 861/1334 (65%), Gaps = 27/1334 (2%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || ||||| | ||||| |||||||| || |||||||||||||| ||||| | || || Sbjct 886453 TACATGTTAGATGTGTAAGGCTCAAAACATTCATTGTTACCCAAAATTTGCGAAGTAGAT 886394 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || || ||||| || || | || || || | || ||| | ||| || Sbjct 886393 GCCGTTGGCATTGGCGCTAGCAGGAGCGAATTTCTGATACCATCTTTGACAATCTTGGCC 886334 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGG 116082 |||||| | |||||||| | | ||| || | | |||||| ||||| || | Sbjct 886333 TTGAGGCCATCCCAGTCCCACAAGTCGGTTGGCTTCTTGTTCCACATGTCAAATTGCAAA 886274 Query 116083 ATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAAT 116142 |||||||| || ||||| || ||| ||||||| ||||| || || || | || | | Sbjct 886273 ATACCTTGCGATGCTGGGGACCCCGCAAATGTTTCATAGGGTCCTTCCTTCAAGGCTAGT 886214 Query 116143 TCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCC 116202 || ||| | | |||||||| || ||||| || ||| || |||| || Sbjct 886213 TCATGCGACGCAGTCAACCCAGCGTGATAAATGGTCTCGAAGATGTGAATGTTCAACTCC 886154 Query 116203 TTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGG 116262 || || || | |||||| || | | ||| | | || || |||| || |||||||| Sbjct 886153 TTCGCTTCTTGGGAATCGAAGGGAATACGCAAAAGCATGAAAGCATCGGCAAGACCTTGA 886094 Query 116263 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAA 116322 || |||||| ||||||| | ||||||||||||||| |||| || ||||| || || ||| Sbjct 886093 ACCCCGAGGGCAATTGGTCTATGTCTCATATTAGATTTTCTGGCCGTCTCAACTGGGTAA 886034 Query 116323 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 116382 | || | ||||| | || || | ||| | ||||| ||||||| || |||||||| Sbjct 886033 TAGTTACGGTCGATGATTCTGTTCAAATTGTAAGTGACGACCTTTGCAATCTCATGAAGT 885974 Query 116383 TTTTCGTAATCAAAACTGCGAGTCT---CTTCATTGACATACTT--AGGAAGG------- 116430 || || | | | | |||||| | ||| | | || || | ||| | Sbjct 885973 TTCTCAAAGTTGTACCATTGAGTCTTGCCGTCA-TCAGATGTTTCGATGAATGCTGGCAA 885915 Query 116431 -GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTC 116489 | || || || |||||||| || | || ||| | |||| |||||| | ||| || Sbjct 885914 AGAAATAGATGCAAGATTACAGACTGCAGTTTCACCAGGTTCAGAGTACTCAACAATCTC 885855 Query 116490 CGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACA 116549 ||||| || ||| || ||| || || |||||||| || || ||| |||| || Sbjct 885854 ACAGCACAAGTTGGAAGATTTGATGACACCTAAATTCTTTTGGTTAGATTTTCTGTTGCA 885795 Query 116550 CGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTT 116609 || || || || ||||| | || || || || || || || | | | ||||| | Sbjct 885794 TGCGTCTTTATAAAGCATGAAAGGAGTACCAGTTTCAGTCTGTGCTTCTAAGATAGCGTA 885735 Query 116610 CCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGT 116668 ||| | || | | || | | || | | || ||||| | |||| | Sbjct 885734 CCACAGTTTCTGAGCCTTG-ATGGTCTTTCTACCGCGACCCTCTTGAACGTAACGCTCAT 885676 Query 116669 AGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGA 116728 | | ||| | ||||| || || | | || | | ||||| |||| |||| | | Sbjct 885675 ATAAAGCCACGAACTCATCGCCATAAACGTCCGCCAATCCTGGCGCCTCGCTTGGAGAAA 885616 Query 116729 AGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCG 116788 | | || ||| | || |||||| |||| ||||| || || ||||| ||||| | | Sbjct 885615 ACAAAGTCCAGTCTCCGTTCTCCTCGACCCTTTTCATAAAAAGATCTGGAATCCATAATG 885556 Query 116789 CCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAA 116848 | | ||| |||||||| || |||||| | || ||||| || | || | || Sbjct 885555 CAGGGAAAAGATCCCGGGCACGGATTTCTTCTTTACCGTGATTCTTCCGGATATCTATAA 885496 Query 116849 AGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTGCGA 116904 |||| | ||||| | |||||| || |||| || | || | | ||| ||| | Sbjct 885495 AGTCAAAAATATCGGAGTGCCATGGCTCCAAATAAATGGCAAAAGCACCAGGTCTTTTG- 885437 Query 116905 CGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATA 116964 |||| | || | ||||| | || || |||||| || |||| ||| ||||| | Sbjct 885436 TTACCACCTTGATCGACATAGCGAGCAGTGTTGTTAAAAACACGAATCATAGGAATCAAT 885377 Query 116965 CCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGGA 117022 |||| ||| || || || || ||| || || | || | | |||| | ||| | Sbjct 885376 CCATTGGATGTACCGTTGGTACCGGCGATGTAGGA-TCCCGTCGAC-CTGATGTTGTGAA 885319 Query 117023 TGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGT 117082 |||||| || ||||| || || ||| || || ||| ||||| | | | | ||| Sbjct 885318 TGTGCAATCCGATACCGCCGGCAGTCTTGGAAATCATTGCACACTCTTTCAAAGTATCGT 885259 Query 117083 AGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCC 117142 |||| || ||||| |||||| |||| | |||| | || ||| |||||| || || Sbjct 885258 AGATACCCTCGATGGAGTCATCCTTCATGGCGACCAAAAAACAGGACGACATCTGAGGGT 885199 Query 117143 TTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATC 117201 || |||||||||||||| |||||||| | || || | || ||| || ||||||| Sbjct 885198 GCGGCGTACCAGCGTTGAAAAGGGTTGGCGAGGCATGCGT-AAAATATCTGAGGGACATT 885140 Query 117202 TTATCGTAGGTCTC 117215 || ||| ||||| Sbjct 885139 AGATTGTAAGTCTC 885126 >seq8 Length=1778692 Score = 95.1 bits (104), Expect = 1e-14 Identities = 341/523 (65%), Gaps = 13/523 (2%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 || || ||| ||| | ||| ||||| | | | || || || |||||||| || || Sbjct 705668 GCGAAGTCTGTGTGCAAACCTTCGTCTCTGCAAATAAGCTCGTTCGAGAACGTGAGTCCG 705609 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| |||||| ||| |||||||||||||| || ||| || || ||||| || | Sbjct 705608 GGCATAAGACCCTTCTTTTTCAACCAGAAAATGGCCGCAAACGAACCTGAGAAAAACACA 705549 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAA 127698 || || ||| |||||||| | || || || || || | || | | || | || Sbjct 705548 CCTTCGACAGCGGCGAACGCTACGAGCCGTTCCGCGAA-CAACGCTTCGTCGTCCTGAAT 705490 Query 127699 CCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC-TTCA- 127756 ||| | |||||||| | ||||| | | || |||| | ||| ||||| || | Sbjct 705489 CCATCTGATCGCCCATTCGGCCTTCTCTTTTATCTGGGGGATGTTCTCAATCGCATTGAA 705430 Query 127757 -AAGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 127815 || | ||| ||| | || | || || |||||||| |||| ||||| || || || Sbjct 705429 CAAAAATTCGTTC--TCCTTA-GGGTCCTTGATGTAGGTATCGATGAGCAACGAGTACGT 705373 Query 127816 TTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 127874 |||| ||||| | | ||| || | ||| || |||||||| | || || | Sbjct 705372 TTCGGAGTGGATGTTCTCCATCAT-GATCTGGAACCCGTAGAAACATTTGGCCTCTGGAA 705314 Query 127875 TCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 127934 | || || || ||| || || | || ||| || ||||| || || || ||| Sbjct 705313 TTTGCACTTCTGCGGAGAAGTTTTCCACGAGATTTTCGTTCACAATACCGTCCGAAGCAG 705254 Query 127935 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCC 127991 | |||||||| || | | | ||| | | || |||||||||| || | |||| Sbjct 705253 CGAAAAACGCAAGCACACGTGAAAGGAAGAACCGCTCGTTCTCGTTCATACGGTTGTTCC 705194 Query 127992 AGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 |||||| | ||||| || | ||| | |||||| || ||||| Sbjct 705193 AGTCGTGCAAGTCCTTGGACAAATCGATCTCCTCTGCCGTCCA 705151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507138649280