Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq8 120 5e-22
seq5 113 7e-20
>seq8
Length=1778692
Score = 120 bits (132), Expect = 5e-22
Identities = 529/823 (64%), Gaps = 17/823 (2%)
Strand=Plus/Minus
Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687
||||| ||| | || || | ||||||||||||||||||||||| | | || ||
Sbjct 705963 CTTCTGGTAGTCGGAGACTCTTTTCTCGAAAAAGTTGGTCTTGCCGGCAAGAGAGATGTT 705904
Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGT-GATAGCGCTTCGGAAATCCGAGAGCCGCCA 159746
|||||| || |||| || || |||||| || | | || || |||||| ||| | |
Sbjct 705903 TTCCATAAAGTCGAAAGGATTGGTCACGTTGAAAACCTTTTGGCT-TCCGAGCGCCACGA 705845
Query 159747 GCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCA 159806
|||| ||||| || |||||||| | || ||| | || ||| || || || |
Sbjct 705844 GCAATCTGTCAGCGACAAATTCCACATACTGGTTCATGAGGTCTGCGTTCATACCGAGTA 705785
Query 159807 GCCTAACGGGGAGCGCTTCC--GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCAC 159864
| || || ||||| || || || | || || || |||||||| || || || |
Sbjct 705784 ACGAGACCGGCAGCGCGTCGATGA-AGTATCTTTTT-TCGATCTCGACAGCCTCCGTGAT 705727
Query 159865 AATCTGCGAGAC-ACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923
|| | ||| | || | | | |||||| | ||| | ||||| | ||
Sbjct 705726 GATTCGTTCGACGATCTTGGGATCT-GGCTTGTTTTTCAAGTGCGC---AAACAACAAGC 705671
Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983
|||| ||||| ||||| || ||||| | | || | |||||| || | |||| |
Sbjct 705670 ACGCGAAGTCTGTGTGCAAACCTTCGTCTCTGCAAATAAGCTCGTTCGAGAACGTGAGTC 705611
Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043
| ||||| | || | ||| | ||| |||||||||||||| | ||| ||||| |
Sbjct 705610 CGGGCATAAGACCCTTCTTTTTCAACCAGAAAATGGCCGCAAACGAACCTGAGAAAAACA 705551
Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGG 160103
|| || || || || ||||| ||||||| || | || | || | | ||| ||
Sbjct 705550 CACCTTCGACAGCGGCGAACGCTACGAGCCGTTCCGCGAACAACGCTTCGTCGTCCTGAA 705491
Query 160104 TCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAA 160163
|||| || | |||||||| ||||||| | || || ||| ||| | || || |
Sbjct 705490 TCCATCTGATCGCCCATTCGGCCTTCTCTTTTATCTGGGGGATGTTCTCAATCGCATTGA 705431
Query 160164 ACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTT 160223
|||| || | |||||| |||||||| ||| | || ||| ||||||| |||
Sbjct 705430 ACAAAAATTCGTTCTCCTTAGGGTCCTTGATGTAGGTATCGATGAGCAACGAGTACGTTT 705371
Query 160224 CTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACT 160283
| | ||| | || || || ||||| || ||||||| || | ||||| || |
Sbjct 705370 CGGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACATTTGGCCTCTGGAATTT 705311
Query 160284 GCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAA 160343
|||| || | ||| ||| | ||||| | || || | ||||| | || || |
Sbjct 705310 GCACTTCTGCGGAGAAGTTTTCCACGAGATTTTCGTTCACAATACCGTCCGAAGCAGCGA 705251
Query 160344 AGAAAGCCA--ACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCA 160401
| || || | |||||||| || ||| | ||||| | ||| | | || | |||
Sbjct 705250 AAAACGCAAGCACACGTGAAAG--GAAGAACCGCTCGTTCTCGTTCATACGGTTGTTCCA 705193
Query 160402 GT-GTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCA 160443
|| ||| || ||| | || |||||| | ||| || || ||||
Sbjct 705192 GTCGTG-CAAGTCCTTGGACAAATCGATCTCCTCTGCCGTCCA 705151
>seq5
Length=1414338
Score = 113 bits (124), Expect = 7e-20
Identities = 324/485 (67%), Gaps = 10/485 (2%)
Strand=Plus/Minus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCT-CAGATAGTACATGC 203897
|||||| | ||| |||||||| ||| |||| | || || ||| |||||||| |
Sbjct 886841 CTTGTCTATCGTAAACTGAATAGCGGCGGATGCAG-CTTGTGTCCGCAGGTAGTACATAC 886783
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CGTTG 203956
| |||||||| ||||| | |||||| || | |||||| | |||||| | || ||| |
Sbjct 886782 CTGTCTTTAGACCCTTTTTCCACCCATAAAAGTGCATACTTGTCAGTTTACCCATCGTAG 886723
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016
| | || ||||||||||| ||||| || ||||| ||| | || || || ||
Sbjct 886722 GAG-CGCGGATGTGAATGTTGAGAGATTGCGACTGGTCAATGTAGCAGGCACGGTCGGCA 886664
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076
||||| | || || ||||| || |||| ||||| ||||||||| ||| |||| ||
Sbjct 886663 GCCATCTCAATGATAGTCTTTTGGGAAAGTTCCCAAACCGTCTTGTACAGGTCTTTGAGC 886604
Query 204077 TGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCA-TCC 204134
| ||| || | | || || || || || || |||||||| | || | | | | |
Sbjct 886603 TCTTGTGGGATGT-TTGGCAAGTTTTGAATAGAACCGTTGTCCGAAAT-AATGTGAGACT 886546
Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATC-AGCTCCCGCACCAGGTGGGGGTTGATG 204193
|| | | || |||| | |||| | | | || || || | || || |||||||
Sbjct 886545 TCATGGCTTCGTCCCATA-CACCAAGGTCAACAAGGTCACGTAGCAAGTATGGGTTGACA 886487
Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253
||||| || || |||||||| || | || | | ||| ||| ||| | || || ||
Sbjct 886486 ATCTGGAACTCACCGGACAGTACACGACGAGAGTACATGTTAGATGTGTAAGGCTCAAAA 886427
Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313
|| ||||| || ||||| || | || ||||| ||||| || || || || ||
Sbjct 886426 CATTCATTGTTACCCAAAATTTGCGAAGTAGATGCCGTTGGCATTGGCGCTAGCAGGAGC 886367
Query 204314 GAGTT 204318
|| ||
Sbjct 886366 GAATT 886362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795155120484480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |