Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq8 120 5e-22 seq5 113 7e-20 >seq8 Length=1778692 Score = 120 bits (132), Expect = 5e-22 Identities = 529/823 (64%), Gaps = 17/823 (2%) Strand=Plus/Minus Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687 ||||| ||| | || || | ||||||||||||||||||||||| | | || || Sbjct 705963 CTTCTGGTAGTCGGAGACTCTTTTCTCGAAAAAGTTGGTCTTGCCGGCAAGAGAGATGTT 705904 Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGT-GATAGCGCTTCGGAAATCCGAGAGCCGCCA 159746 |||||| || |||| || || |||||| || | | || || |||||| ||| | | Sbjct 705903 TTCCATAAAGTCGAAAGGATTGGTCACGTTGAAAACCTTTTGGCT-TCCGAGCGCCACGA 705845 Query 159747 GCAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCA 159806 |||| ||||| || |||||||| | || ||| | || ||| || || || | Sbjct 705844 GCAATCTGTCAGCGACAAATTCCACATACTGGTTCATGAGGTCTGCGTTCATACCGAGTA 705785 Query 159807 GCCTAACGGGGAGCGCTTCC--GACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCAC 159864 | || || ||||| || || || | || || || |||||||| || || || | Sbjct 705784 ACGAGACCGGCAGCGCGTCGATGA-AGTATCTTTTT-TCGATCTCGACAGCCTCCGTGAT 705727 Query 159865 AATCTGCGAGAC-ACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGC 159923 || | ||| | || | | | |||||| | ||| | ||||| | || Sbjct 705726 GATTCGTTCGACGATCTTGGGATCT-GGCTTGTTTTTCAAGTGCGC---AAACAACAAGC 705671 Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983 |||| ||||| ||||| || ||||| | | || | |||||| || | |||| | Sbjct 705670 ACGCGAAGTCTGTGTGCAAACCTTCGTCTCTGCAAATAAGCTCGTTCGAGAACGTGAGTC 705611 Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043 | ||||| | || | ||| | ||| |||||||||||||| | ||| ||||| | Sbjct 705610 CGGGCATAAGACCCTTCTTTTTCAACCAGAAAATGGCCGCAAACGAACCTGAGAAAAACA 705551 Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGG 160103 || || || || || ||||| ||||||| || | || | || | | ||| || Sbjct 705550 CACCTTCGACAGCGGCGAACGCTACGAGCCGTTCCGCGAACAACGCTTCGTCGTCCTGAA 705491 Query 160104 TCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAA 160163 |||| || | |||||||| ||||||| | || || ||| ||| | || || | Sbjct 705490 TCCATCTGATCGCCCATTCGGCCTTCTCTTTTATCTGGGGGATGTTCTCAATCGCATTGA 705431 Query 160164 ACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTT 160223 |||| || | |||||| |||||||| ||| | || ||| ||||||| ||| Sbjct 705430 ACAAAAATTCGTTCTCCTTAGGGTCCTTGATGTAGGTATCGATGAGCAACGAGTACGTTT 705371 Query 160224 CTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACT 160283 | | ||| | || || || ||||| || ||||||| || | ||||| || | Sbjct 705370 CGGAGTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACATTTGGCCTCTGGAATTT 705311 Query 160284 GCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAA 160343 |||| || | ||| ||| | ||||| | || || | ||||| | || || | Sbjct 705310 GCACTTCTGCGGAGAAGTTTTCCACGAGATTTTCGTTCACAATACCGTCCGAAGCAGCGA 705251 Query 160344 AGAAAGCCA--ACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCA 160401 | || || | |||||||| || ||| | ||||| | ||| | | || | ||| Sbjct 705250 AAAACGCAAGCACACGTGAAAG--GAAGAACCGCTCGTTCTCGTTCATACGGTTGTTCCA 705193 Query 160402 GT-GTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCA 160443 || ||| || ||| | || |||||| | ||| || || |||| Sbjct 705192 GTCGTG-CAAGTCCTTGGACAAATCGATCTCCTCTGCCGTCCA 705151 >seq5 Length=1414338 Score = 113 bits (124), Expect = 7e-20 Identities = 324/485 (67%), Gaps = 10/485 (2%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCT-CAGATAGTACATGC 203897 |||||| | ||| |||||||| ||| |||| | || || ||| |||||||| | Sbjct 886841 CTTGTCTATCGTAAACTGAATAGCGGCGGATGCAG-CTTGTGTCCGCAGGTAGTACATAC 886783 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCA-CGTTG 203956 | |||||||| ||||| | |||||| || | |||||| | |||||| | || ||| | Sbjct 886782 CTGTCTTTAGACCCTTTTTCCACCCATAAAAGTGCATACTTGTCAGTTTACCCATCGTAG 886723 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016 | | || ||||||||||| ||||| || ||||| ||| | || || || || Sbjct 886722 GAG-CGCGGATGTGAATGTTGAGAGATTGCGACTGGTCAATGTAGCAGGCACGGTCGGCA 886664 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076 ||||| | || || ||||| || |||| ||||| ||||||||| ||| |||| || Sbjct 886663 GCCATCTCAATGATAGTCTTTTGGGAAAGTTCCCAAACCGTCTTGTACAGGTCTTTGAGC 886604 Query 204077 TGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCA-TCC 204134 | ||| || | | || || || || || || |||||||| | || | | | | | Sbjct 886603 TCTTGTGGGATGT-TTGGCAAGTTTTGAATAGAACCGTTGTCCGAAAT-AATGTGAGACT 886546 Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCTGATC-AGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | | || |||| | |||| | | | || || || | || || ||||||| Sbjct 886545 TCATGGCTTCGTCCCATA-CACCAAGGTCAACAAGGTCACGTAGCAAGTATGGGTTGACA 886487 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 ||||| || || |||||||| || | || | | ||| ||| ||| | || || || Sbjct 886486 ATCTGGAACTCACCGGACAGTACACGACGAGAGTACATGTTAGATGTGTAAGGCTCAAAA 886427 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 || ||||| || ||||| || | || ||||| ||||| || || || || || Sbjct 886426 CATTCATTGTTACCCAAAATTTGCGAAGTAGATGCCGTTGGCATTGGCGCTAGCAGGAGC 886367 Query 204314 GAGTT 204318 || || Sbjct 886366 GAATT 886362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795155120484480