Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq8 136 9e-27
seq6 113 1e-19
>seq8
Length=1778692
Score = 136 bits (150), Expect = 9e-27
Identities = 155/208 (75%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| ||||| ||||||||||||| ||||||||||| |||||| || ||
Sbjct 71412 TCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 71353
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||||| ||||| || || ||||| | | || ||||| ||| ||| |||||
Sbjct 71352 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTT 71293
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| || || | |||||| | | ||| || ||||| |||||
Sbjct 71292 GTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 71233
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAA 199621
|||||||| || | || || ||||||
Sbjct 71232 GGTCTTACCAGTCAAGGTCTTGACAAAA 71205
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| || || || |||||||| | ||||||||| | |||||| |||||
Sbjct 1641509 TCTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTTCC 1641450
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||||| ||||| || |||||||| | | |||||||| || || |||||
Sbjct 1641449 ATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGGATACCTTCCTT 1641390
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| || |||| |||||| | | ||| || || || |||||
Sbjct 1641389 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAAGATTCAACCTCTAAGGTGAT 1641330
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||||||||| || || || |||||||| ||
Sbjct 1641329 AGTCTTACCCGTAAGGGTCTTGACAAAAATCTG 1641297
Score = 86.0 bits (94), Expect = 1e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| | | ||||| || || ||||| ||||||||||| || |||||| | || ||||||
Sbjct 71318 AAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTACAACA 71377
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024
|||| || ||||| ||||||||| | || ||||||
Sbjct 71378 TCCAAAAGGAGTCCACTCTTCACTTGGTCTTGAGA 71412
>seq6
Length=1501435
Score = 113 bits (124), Expect = 1e-19
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|| ||| | ||| | ||| || || ||||| | |||||| || | ||| || || |||||
Sbjct 435052 CAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATC 435111
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||| ||| || || ||||| || | | || ||||| ||| || || ||| ||
Sbjct 435112 TTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTC 435171
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||||||||| |||||| |||| |||||| | | ||| || || | || |||||
Sbjct 435172 CTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACCTCGAGAGTAATCGT 435231
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| ||||| || ||||| |||||||| ||
Sbjct 435232 CTTTCCCGTAAGGGTTTTGACAAAAATCTG 435261
Score = 109 bits (120), Expect = 1e-18
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|| ||| | ||| ||||| || || ||||| | |||||| || | ||| || || |||||
Sbjct 434055 CAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATC 434114
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||| ||| || || ||||| || | | || ||||| ||| || || ||| ||
Sbjct 434115 TTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTC 434174
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||||||||| |||||| |||| ||||| | | ||| || || | || |||||
Sbjct 434175 CTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGT 434234
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| |||||||| || || || ||||| ||
Sbjct 434235 CTTTCCCGTGAGGGTCTTGACGAAAATCTG 434264
Score = 104 bits (114), Expect = 6e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|| ||| | ||| | ||| || || ||||| | |||||| || | ||| || || |||||
Sbjct 434824 CAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATC 434883
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||||| ||| || || ||||| || | | || ||||| ||| || || ||| ||
Sbjct 434884 TTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTC 434943
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||||||||| |||||| |||| ||||| | | ||| || || | || |||||
Sbjct 434944 CTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGT 435003
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| |||||||| || || || ||||| ||
Sbjct 435004 CTTTCCCGTGAGGGTCTTGACGAAAATCTG 435033
Score = 87.8 bits (96), Expect = 4e-12
Identities = 102/138 (74%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
|| ||| | ||| | ||| || || ||||| | |||||| |||| ||| || || |||||
Sbjct 434283 CAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCAGACAATGTTCTACCATC 434342
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||| | |||||| || || ||||| || | |||||| |||||| || || || ||
Sbjct 434343 TTCTAACTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATACCCTCCTTGTC 434402
Query 199537 CTGAATCTTTTGCTTCAC 199554
||||||||| ||||||
Sbjct 434403 CTGAATCTTGGACTTCAC 434420
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921479160536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |