Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq8 131 7e-25 seq4 107 8e-18 seq6 84.2 9e-11 >seq8 Length=1778692 Score = 131 bits (144), Expect = 7e-25 Identities = 397/604 (66%), Gaps = 22/604 (4%) Strand=Plus/Minus Query 451898 GAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCT 451957 ||||| || ||||| || |||||||| ||||||| || ||||| | | | ||| Sbjct 1126157 GAAATCGTTCTTGTTGGTGGTTCTACCAGAATTCCAAAGGTTCAAAAGCTTGTCTCTGAC 1126098 Query 451958 TATTTT---GG--AGGAAAACAACTATGTAAGAGCG-TAAATCCTGATGAAGCTGTTGCA 452011 || || || ||||| |||| ||| | | || ||||||||||||||||| Sbjct 1126097 TACTTCAACGGTAAGGAACCCAAC------AGATCCATCAACCCTGATGAAGCTGTTGCT 1126044 Query 452012 TATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGAT--GAAAAATTAGGAG 452069 || |||||||| |||||||| || || | || ||| || | ||| | | | || Sbjct 1126043 TACGGTGCTGCCGTTCAAGCCGCCATCTTGACTGGTGACGAATCTTCGAAGACTCA--AG 1125986 Query 452070 ATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGA 452129 | | |||| | ||||| | |||||||||||||| ||||||| |||||||| | | Sbjct 1125985 ACTTGTTGTTGTTGGATGTCGCTCCTCTATCTCTTGGTATTGAAACCGCTGGTGGTGTCA 1125926 Query 452130 TGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTA 452189 |||| || || ||| | || || ||||||| || | |||| | ||| | Sbjct 1125925 TGACCAAGTTGATTCCAAGAAACTCTACTATTCCAACCAAGA--AGTCTGAAGTTTTCTC 1125868 Query 452190 CAGCAA--GTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAAT 452247 || | || |||||||||||||| ||||||||||||||||| ||| | || | Sbjct 1125867 CACTTACGCCGACAACCAACCAGGTGTGTTGATTCAAGTGTTTGAAGGTGAAAGAGCTAA 1125808 Query 452248 GACACGAGATAATAATAAACTAGGAGAATTT-ACTCTTTCAAACATTCCTCCTATGCCAA 452306 ||| || || || | || | ||| ||| | || || ||| |||| Sbjct 1125807 GACTAAGGACAACAACTTGTTGGGTAAGTTTGACT-TGAGCGGTATCCCACCTGCTCCAA 1125749 Query 452307 GGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGA 452366 | || || ||||| ||| | || | |||||||| || || |||||| | || || Sbjct 1125748 GAGGTGTCCCACAAATCGAAGTCACTTTCGATGTTGACGCCAACGGTATTTTGAACGTCT 1125689 Query 452367 GTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACC 452426 ||| |||||||| |||| || || ||||| || || || || || || || Sbjct 1125688 CTGCGGTTGAAAAGGGTACTGGTAAGTCTGAAAAGATCACTATCACCAACGACAAGGGTA 1125629 Query 452427 GTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATG 452486 | || | || ||||| ||||| | |||||| || || || || |||||||| || | Sbjct 1125628 GATTGACCAAGGAAGACATTGAGAGAATGGTTTCCGAGGCCGAGAAGTTCAAGGAAGAAG 1125569 Query 452487 ATGA 452490 |||| Sbjct 1125568 ATGA 1125565 Score = 125 bits (138), Expect = 3e-23 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || || || ||||| ||||| || | || |||||||| ||| Sbjct 1641294 ATGCAGATTTTTGTCAAGACCCTTACGGGTAAGACTATCACCTTAGAGGTTGAATCTTCT 1641353 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | | || || || || || |||||||| || || ||||| || Sbjct 1641354 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATCCCACCTGACCAG 1641413 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || || ||| | || || ||| | |||||||||||||||||| | || || || Sbjct 1641414 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGTCCGACTACAAC 1641473 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | ||||| | || || ||||| || || ||| ||||||| Sbjct 1641474 ATTCAAAAGGAATCCACCCTGCACTTGGTCTTGAGATTGAGAGG 1641517 Score = 123 bits (136), Expect = 1e-22 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 391058 TTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACAT 391117 ||| || || || |||||||||| || || ||| | || || ||||| || || | ||| Sbjct 71205 TTTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCAT 71264 Query 391118 TGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTT 391177 ||| | | || || || || || |||||||| ||||||||||| |||||| | || Sbjct 71265 TGACAATGTCAAGTCGAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAACAAAGATT 71324 Query 391178 AATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAA 391237 || || | || || ||| | |||||||| ||||||||| | || || || || | || Sbjct 71325 GATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTACAACATCCAAAA 71384 Query 391238 GGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || |||||||| || || ||| ||||||| Sbjct 71385 GGAGTCCACTCTTCACTTGGTCTTGAGATTGAGAGG 71420 >seq4 Length=1207720 Score = 107 bits (118), Expect = 8e-18 Identities = 410/638 (64%), Gaps = 12/638 (2%) Strand=Plus/Minus Query 451890 AAATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGT 451949 |||| || || || ||||| || ||||| || || ||||||| ||| | ||| | | Sbjct 460680 AAATCGACGAGATCGTGCTCGTTGGAGGCTCGACCAGAATTCCAAAAGTGCAAAAACTCG 460621 Query 451950 TGTCTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTG 452009 | || || ||| || ||| ||| ||| | | || || |||||||| |||| Sbjct 460620 TTTCGGATTTCTTTAACGGCAAAGAACCCAACAAGTCCATCAACCCAGATGAAGCGGTTG 460561 Query 452010 CATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTT--CAGATGATGAAAAATTAGG 452067 | || ||||| || || || || ||||| | || ||| ||| ||| | | ||| Sbjct 460560 CGTACGGTGCCGCCGTACAGGCCGCTATCTTGACCGGTGACCAGTCCTCGAAGACTCAGG 460501 Query 452068 AGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAAT 452127 | | || | || | || || | ||| | || || ||| | |||||||| || ||||| Sbjct 460500 ACTTGTT--GCTATTGGACGTGGCGCCTTTGTCGCTCGGAATCGAAACAGCAGGAGGAAT 460443 Query 452128 GATGACTAATTTAATTAAACGAGGAACTT--CTATTCCTTGTAAAAAGAGTCAAACATTT 452185 ||||| || || || | || |||| | |||||| || || | || ||| Sbjct 460442 CATGACCAAATTGATCC--CCAGAAACTCGACGATTCCTACCAAGAAATCTGAAG--TTT 460387 Query 452186 AGTACAGCAAGT--GATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTG 452243 | || | | || |||||||| || || ||||||||||| ||||| ||| | Sbjct 460386 TCTCCACCTATGCCGACAACCAACCGGGCGTTCTAATTCAAGTGTTCGAAGGTGAAAGAA 460327 Query 452244 CAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGC 452303 | || ||||| ||| ||| || |||| ||||| || || || || Sbjct 460326 CCCGAACCAAGGATAACAATTTACTTGGGAAATTCGAGCTTTCCGGGATCCCACCGGCGC 460267 Query 452304 CAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATG 452363 |||| || || || |||||| | || | |||| | ||||| || || || | || | Sbjct 460266 CAAGAGGTGTACCACAGATTGAAGTCACTTTTGATCTCGATGCCAACGGAATCTTGAACG 460207 Query 452364 TGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAA 452423 || ||| ||||||| | |||||||| || || || || || || || || Sbjct 460206 TGTCTGCCATTGAAAAGGGTACCGGAAAATCCAGCAAGATCACCATCACCAACGACAAGG 460147 Query 452424 ACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATG 452483 ||||| || || || || ||||||| |||||| |||||||| |||||||| | | Sbjct 460146 GTCGTTTGTCCAAGGACGACATTGAAAGAATGGTGTCGGAAGCAGAGAAATTCAAAGCCG 460087 Query 452484 ATGATGAACAAGTTAGAAAACATGTTGAAGCTAAAAAC 452521 | || ||| ||| | ||| ||| || | |||||| Sbjct 460086 AAGACGAAAAAGAAGCAGAACGGGTTCAAACCAAAAAC 460049 >seq6 Length=1501435 Score = 84.2 bits (92), Expect = 9e-11 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 451842 TGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAA 451901 ||||||| || || |||| || | ||| || | | ||||| | ||||| || | Sbjct 1088528 TGAAACCGGTCGAAAAAGTCTTGGAAGATGCTGGTGTCAAGAAAGAAGATATTGACGACA 1088469 Query 451902 TTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATT 451961 |||| |||||||| |||||||| ||||||| ||| |||| | | ||| ||| || Sbjct 1088468 TTGTTCTTGTAGGTGGTTCTACTAGAATTCCAAAAGTTCAGCAACTTTTGGAAACTT-TT 1088410 Query 451962 TTGGAGGAAAACAA--CTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGC 452019 || | | || || || | ||| || | || ||||| ||||||||||| | |||||| Sbjct 1088409 TTCAACGGTAAGAAGGCT-TCCAAGGGCATCAACCCTGACGAAGCTGTTGCTTTTGGTGC 1088351 Query 452020 TGCAGTTCAAGCAG 452033 || |||||||||| Sbjct 1088350 AGCTGTTCAAGCAG 1088337 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975718197488864