Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 224 1e-53 seq1 87.8 2e-12 >seq5 Length=1414338 Score = 224 bits (248), Expect = 1e-53 Identities = 838/1295 (65%), Gaps = 39/1295 (3%) Strand=Plus/Plus Query 111720 CCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCA 111779 |||||||| |||||||||||||| || || || ||||| ||||| | | || Sbjct 885171 CCAACCCTTTTCAACGCTGGTACGCCGCACCCTCAGATGTCGTCCTGTTTTTTGGTCGCC 885230 Query 111780 AACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCA 111839 | ||||| || || ||| | || || |||| ||| | | || ||||| || || Sbjct 885231 ATGAAGGATGACTCCATCGAGGGTATCTACGATACTTTGAAAGAGTGTGCAATGATTTCC 885290 Query 111840 AAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTAT 111898 ||| || || |||||||| ||||||| || | |||| | | || | || || Sbjct 885291 AAGACTGCCGGCGGTATCGGATTGCACATTCACAACATCAG-GTCGACGGGATCCTACAT 885349 Query 111899 TAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCAC 111958 ||||| || ||| ||| |||| | ||||| ||| |||| || |||||| ||| Sbjct 885350 CGCCGGTACCAACGGTACATCCAATGGATTGATTCCTATGATTCGTGTTTTTAACAACAC 885409 Query 111959 AGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAG----GGATCTATCGCAGTCTATCTTG 112014 || |||||||| | |||| ||| | ||| || || | || | ||| | | Sbjct 885410 TGCTCGCTATGTCGATCAAGGTGGTAA-CAAAAGACCTGGTGCTTTTGCCATTTATTTGG 885468 Query 112015 AGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGG 112074 ||||||||||| | ||||| | || || | || | || || || ||| | || | Sbjct 885469 AGCCATGGCACTCCGATATTTTTGACTTTATAGATATCCGGAAGAATCACGGTAAAGAAG 885528 Query 112075 AGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 112134 | || ||| ||||| ||| | || | |||||||||||||| || ||||| || | Sbjct 885529 AAATCCGTGCCCGGGATCTTTTCCCTGCATTATGGATTCCAGATCTTTTTATGAAAAGGG 885588 Query 112135 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATG 112194 | ||||||| || | ||| || | |||| |||| | |||| || || | | || | Sbjct 885589 TCGAGGAGAACGGAGACTGGACTTTGTTTTCTCCAAGCGAGGCGCCAGGATTGGCGGACG 885648 Query 112195 CCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTG 112254 || || ||||| | || | || |||| |||| |||| | | Sbjct 885649 TTTATGGCGATGAGTTCGTGGCTTTATATGAGCGTTACGTTCAAGAGGGTCGCGGTAGAA 885708 Query 112255 CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 112314 ||| | ||| | ||||| | ||||| | | | || || || ||||||| Sbjct 885709 AGACCATCAAGGCTCAGAAACTGTGGTACGCTATCTTAGAAGCACAGACTGAAACTGGTA 885768 Query 112315 CACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 112374 | || | |||||||| |||||||| || ||| ||| ||| ||||||||||| |||| Sbjct 885769 CTCCTTTCATGCTTTATAAAGACGCATGCAACAGAAAATCTAACCAAAAGAATTTAGGTG 885828 Query 112375 TGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 112434 | ||||| ||||||| | || || || | || | | || | ||| || | Sbjct 885829 TCATCAAATCTTCCAACTTGTGCTGTGAGATTGTTGAGTACTCTGAACCTGGTGAAACTG 885888 Query 112435 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATG--TGGATCCA---GA-GACA- 112487 | || ||||| || ||||| || || | || || || | || || || ||| Sbjct 885889 CAGTCTGTAATCTTGCATCTATTTCTTTGCC--AGCATTCATCGAAACATCTGATGACGG 885946 Query 112488 -AAGAC--ATTTG----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAA 112540 ||||| | | | | | ||| ||||| || || || | || ||||| | || Sbjct 885947 CAAGACTCAATGGTACAACTTTGAGAAACTTCATGAGATTGCAAAGGTCGTCACTTACAA 886006 Query 112541 CCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATAT 112600 | |||||| | || || | || | |||||| |||||||| || | ||||||||||| Sbjct 886007 TTTGAACAGAATCATCGACCGTAACTATTACCCAGTTGAGACGGCCAGAAAATCTAATAT 886066 Query 112601 GAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCG 112660 |||||| | ||||||| ||||| || |||||||| || |||| ||||| |||| || Sbjct 886067 GAGACATAGACCAATTGCCCTCGGGGTTCAAGGTCTTGCCGATGCTTTCATGCTTTTGCG 886126 Query 112661 CCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTA 112720 | || |||||| | ||||||||||| | || | || || ||||| || || Sbjct 886127 TATTCCCTTCGATTCCCAAGAAGCGAAGGAGTTGAACATTCACATCTTCGAGACCATTTA 886186 Query 112721 TCACGCCGCTCTTGA-GGCGAGTTCG---GAGTTGGCAGAGGTTGATGGTCCATATGAAA 112776 |||||| | |||| ||| ||| || | || | || || || ||||||| Sbjct 886187 TCACGCTG-GGTTGACTGCG---TCGCATGAACTAGCCTTGAAGGAAGGACCCTATGAAA 886242 Query 112777 CCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA 112836 | |||| ||| || ||||| || ||||| | | |||||||| |||| |||| || Sbjct 886243 CATTTGCGGGGTCCCCAGCATCGCAAGGTATTTTGCAATTTGACATGT-GGAACAAGAAG 886301 Query 112837 CCAAGCTTC-ACTACGACTGGGACGCTCTCAAGG---AACGCATCAAGGAGAAGGGTCTT 112892 |||| | | | |||||||| | ||||||| | |||| | | ||| | Sbjct 886302 CCAACCGACTTGTGGGACTGGGATGGCCTCAAGGCCAAGATTGTCAAAG---ATGGTATC 886358 Query 112893 CGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAAT 112952 | || || || | || ||||||||||| || || || | ||||| |||||||| Sbjct 886359 AGAAATTCGCTCCTGCTAGCGCCAATGCCAACGGCATCTACTTCGCAAATTTTGGGTAAC 886418 Query 112953 AATGAATGCTTTGAACCCTACACGACGAACATCTA 112987 |||||||| ||||| || ||||| | ||||| || Sbjct 886419 AATGAATGTTTTGAGCCTTACACATCTAACATGTA 886453 >seq1 Length=824037 Score = 87.8 bits (96), Expect = 2e-12 Identities = 192/284 (68%), Gaps = 3/284 (1%) Strand=Plus/Plus Query 16052 TTGCTTTCCCAC-GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAG 16110 || |||| ||| |||||| || ||||||| |||| ||| ||| ||| | || Sbjct 653599 TTTCTTTACCAATGGCATCTATTTCATCAACAAAGATAATGGCAGGTGCCATTTTTCTAG 653658 Query 16111 CGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGT 16170 || ||| || || || || || || || || |||||||||||||| || ||||| | Sbjct 653659 CGGTTTCGAATAGGTCGCGCACGCGGGATGCACCGACACCAACAAACATTTCAACAAATT 653718 Query 16171 TTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 16229 | | |||| ||| | || || || | |||||| || ||||| ||| ||| Sbjct 653719 CCGAGCCGGATACAGACAAA-AACGGCACCCCGGCTTCACCTGCCGTGGCTTTGGCCAGA 653777 Query 16230 AGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 16289 ||||||||||| ||||| || || | | | ||| || |||||||||||||| ||| Sbjct 653778 AGAGTCTTACCAGTACCGGGTGGTCCAGACAAAATGGCGCCACGTGGAATCTTGGCACCA 653837 Query 16290 CTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTC 16333 | | |||| | || |||| | | ||||| ||||| ||| Sbjct 653838 AGTGCTCTGTATTTGTCCGGTTTTTGCAAAAAATGCACAAACTC 653881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742337925760