Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq5 279 6e-70
seq1 87.8 2e-12
>seq5
Length=1414338
Score = 279 bits (308), Expect = 6e-70
Identities = 1120/1740 (64%), Gaps = 53/1740 (3%)
Strand=Plus/Minus
Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649
|| || |||||||| || ||||| || || | ||||||| | || | |||||| |
Sbjct 886798 CGCAGGTAGTACATACCTGTCTTTAGACCCTTTTTCCACCCATAAAAGTGCATACTTGTC 886739
Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709
|| || |||||| ||| ||| || || | | ||| |||||||||| ||
Sbjct 886738 AGTTTACCCATCGTAGGAGCGCGGATGTGAATGTTGAGAGATTGCGACTGGTCAATGTAG 886679
Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG----ATTTCCCACACTGT 105765
| |||| | || ||||| ||||||| | ||| ||| | |||||| || ||
Sbjct 886678 CAGGCACGGTCGGCAGCCATCTCAATGATAGTCTT----TTGGGAAAGTTCCCAAACCGT 886623
Query 105766 GCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGC 105825
||| || | |||| || | |||||| | || | |||||||| ||||| |
Sbjct 886622 CTTGTACAGGTCTTTGAGCTCTTGTGGGATGTTTGGCAAGTTTTGAATAGAACCGTTGTC 886563
Query 105826 CTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGA- 105884
| | ||| || |||||| | | | ||| | ||||| | || ||| |
Sbjct 886562 CGAAATAATGTGAGACTTCATGGCTTCGTCCCATACACCAAGGTCAACAAGGTCACGTAG 886503
Query 105885 CGAG-ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTT 105942
| || ||| |||||||||| ||||| || | || | | ||| || |||||
Sbjct 886502 CAAGTATGG--GTTGACAATCTGGAACTCACCGGACAGTACACGACG-AGAGTACATGTT 886446
Query 105943 CGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGG 106002
| ||||| || ||||| |||||||| |||||||| ||||| | || || || |||||
Sbjct 886445 AGATGTGTAAGGCTCAAAACATTCATTGTTACCCAAAATTTGCGAAGTAGATGCCGTTGG 886386
Query 106003 CATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAAC 106062
|||||| || | || || || | | ||| | || || ||||||| |
Sbjct 886385 CATTGGCGCTAGCAGGAGCGAATTTCTGATACCATCTTTGACAATCTTGGCCTTGAGGCC 886326
Query 106063 ATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTT 106121
||||||||| | | | |||| ||| |||| |||| |||||||| | | ||||
Sbjct 886325 ATCCCAGTCCCACAAGTCGGTTGGCTTCTTGTTCC-ACATGTCAAATTGCAAAATACCTT 886267
Query 106122 GGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCA--GCCAATTCACA 106179
| || | || || ||| ||||||| ||||||| |||| ||||| || | ||||
Sbjct 886266 GCGATGCTGGGGACCCCGCAAATGTTTCATAGGGTCCTTC--CTTCAAGGCTAGTTCATG 886209
Query 106180 GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGC 106239
||| || |||||||| ||||| || ||||| || |||| |||||| ||
Sbjct 886208 CGACGCAGTCAACCCAGCGTGATAAATGGTCTCGAAGATGTGAATGTTCAACTCCTTCGC 886149
Query 106240 TTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACAC 106298
||| | ||||| || | | | ||| || || || |||| || ||||||||||| |
Sbjct 886148 TTCTTGGGAATCGAAGG-GAATACGCAAAAGCATGAAAGCATCGGCAAGACCTTGAACCC 886090
Query 106299 CCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAAT 106358
| | |||| ||||| |||| ||||||||| |||| || |||||||| || ||| | |
Sbjct 886089 CGAGGGCAATTGGTCTATGTCTCATATTAGATTTTCTGGCCGTCTCAACTGGGTAATAGT 886030
Query 106359 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 106418
| | ||| |||| || ||| | ||| | || || | ||||| || ||||||||||| |
Sbjct 886029 TACGGTCGATGATTCTGTTCAAATTGTAAGTGACGACCTTTGCAATCTCATGAAGTTTCT 885970
Query 106419 CATAATCAAAAGTGCGAGTCT---CTTCATTGACATACTT----------TGGAAGGGCG 106465
|| | | | |||||| | ||| | | || || ||| | |
Sbjct 885969 CAAAGTTGTACCATTGAGTCTTGCCGTCA-TCAGATGTTTCGATGAATGCTGGCAAAGAA 885911
Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525
|| ||||| | ||| || || || || ||| | || | |||||| | ||| ||
Sbjct 885910 ATAGATGCAAGATTACAGACTGCAGTTTCACCAGGTTCAGAGTACTCAACAATCTCACAG 885851
Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585
|||||||||||| || || || ||||||||||||||| ||| ||||||| ||
Sbjct 885850 CACAAGTTGGAAGATTTGATGACACCTAAATTCTTTTGGTTAGATTTTCTGTTGCATGCG 885791
Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC 106645
|| || || |||||| | || || || || || ||||||| | | || || | ||||
Sbjct 885790 TCTTTATAAAGCATGAAAGGAGTACCAGTTTCAGTCTGTGCTTCTAAGATAGCGTACCAC 885731
Query 106646 A-CATCGGCGGCTGGTACAATGGCGT---TGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 106701
| || | | || | |||| | | | || ||||| |||| ||
Sbjct 885730 AGTTTCTGAGCCTTG----ATGGTCTTTCTACCGCGACCCTCTTGAACGTAACGCTCATA 885675
Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 106761
| || | ||||| || || |||| | | ||||| |||| | |||| | ||
Sbjct 885674 TAAAGCCACGAACTCATCGCCATAAACGTCCGCCAATCCTGGCGCCTCGCTTGGAGAAAA 885615
Query 106762 AAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 106821
| || ||| | || |||||| |||| ||||| ||||| ||||||||||| | |
Sbjct 885614 CAAAGTCCAGTCTCCGTTCTCCTCGACCCTTTTCATAAAAAGATCTGGAATCCATAATGC 885555
Query 106822 TGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 106880
| || ||||| | ||| || ||||| | ||| || || || | || | |
Sbjct 885554 AGGGAAAAGATCCCGGGCACGGA-TTTCTTCTTTACCGTGATTCTTCCGGATATCTATAA 885496
Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGA 106936
| || | ||||| | |||||||||||| | ||| | || | || || |||| |
Sbjct 885495 AGTCAAAAATATCGGAGTGCCATGGCTCCAAATAAATGGCAAAAGCACCAGGTCTTTTG- 885437
Query 106937 CGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATA 106996
||| |||||| |||||||| || ||| |||||| || |||| ||| ||||| |
Sbjct 885436 TTACCACCTTGATCGACATAGCGAGCAGTGTTGTTAAAAACACGAATCATAGGAATCAAT 885377
Query 106997 CCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATG 107056
|||| ||| ||| || || || || ||| | | || | | || |||
Sbjct 885376 CCATTGGATGTACCGTTGGTACCGGCGATGTAGGATCCCGTCGACCTGATGTTGTGAATG 885317
Query 107057 TGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAG 107116
|||| || ||||| || || ||| || || |||||||| | | ||| | |||
Sbjct 885316 TGCAATCCGATACCGCCGGCAGTCTTGGAAATCATTGCACACTCTTTCAAAGTATCGTAG 885257
Query 107117 ATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTT 107176
||||| | ||| ||||| ||||| |||||| | || || |||||||| ||
Sbjct 885256 ATACCCTCGATGGAGTCATCCTTCATGGCGACCAAAAAACAGGACGACATCTGAGGGTGC 885197
Query 107177 GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTT 107235
|| |||||||| ||||| |||||||| | || || | || ||| || |||||||
Sbjct 885196 GGCGTACCAGCGTTGAAAAGGGTTGGCGAGGCATGCGT-AAAATATCTGAGGGACATTAG 885138
Query 107236 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295
| ||| ||||| | || ||||| | ||||| ||||||| ||| ||||||||
Sbjct 885137 ATTGTAAGTCTCGATCACCTTTTCAATATTGGTTCCGTGTATGCCGACGGCAACACGCAT 885078
>seq1
Length=824037
Score = 87.8 bits (96), Expect = 2e-12
Identities = 192/284 (68%), Gaps = 3/284 (1%)
Strand=Plus/Plus
Query 9359 TTGCTTTCCCAC-GGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGG 9417
|| |||| ||| |||||| || ||||||| |||| ||| ||| ||| | |
Sbjct 653599 TTTCTTTACCAATGGCATCTATTTCATCAACAAAGATAATGGCAGGTGCCATTTTTCTAG 653658
Query 9418 CGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGT 9477
|| |||| || || ||||| || | || || |||||||||||||| || ||||| |
Sbjct 653659 CGGTTTCGAATAGGTCGCGCACGCGGGATGCACCGACACCAACAAACATTTCAACAAATT 653718
Query 9478 TTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 9536
| | |||| ||| | || || || | |||||| || ||||| ||| |||
Sbjct 653719 CCGAGCCGGATACAGACAAA-AACGGCACCCCGGCTTCACCTGCCGTGGCTTTGGCCAGA 653777
Query 9537 AGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCA 9596
||||||||||| ||||| || || | | | ||| || |||||||||||||| |||
Sbjct 653778 AGAGTCTTACCAGTACCGGGTGGTCCAGACAAAATGGCGCCACGTGGAATCTTGGCACCA 653837
Query 9597 CTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640
| | |||| | || |||| | | ||||| ||||| |||
Sbjct 653838 AGTGCTCTGTATTTGTCCGGTTTTTGCAAAAAATGCACAAACTC 653881
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980741001920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |