Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5 279 6e-70 seq1 87.8 2e-12 >seq5 Length=1414338 Score = 279 bits (308), Expect = 6e-70 Identities = 1120/1740 (64%), Gaps = 53/1740 (3%) Strand=Plus/Minus Query 105590 CGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGCATAGAAGAG 105649 || || |||||||| || ||||| || || | ||||||| | || | |||||| | Sbjct 886798 CGCAGGTAGTACATACCTGTCTTTAGACCCTTTTTCCACCCATAAAAGTGCATACTTGTC 886739 Query 105650 AGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGGTCAATGAAG 105709 || || |||||| ||| ||| || || | | ||| |||||||||| || Sbjct 886738 AGTTTACCCATCGTAGGAGCGCGGATGTGAATGTTGAGAGATTGCGACTGGTCAATGTAG 886679 Query 105710 CGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTG----ATTTCCCACACTGT 105765 | |||| | || ||||| ||||||| | ||| ||| | |||||| || || Sbjct 886678 CAGGCACGGTCGGCAGCCATCTCAATGATAGTCTT----TTGGGAAAGTTCCCAAACCGT 886623 Query 105766 GCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAACCCCCCGC 105825 ||| || | |||| || | |||||| | || | |||||||| ||||| | Sbjct 886622 CTTGTACAGGTCTTTGAGCTCTTGTGGGATGTTTGGCAAGTTTTGAATAGAACCGTTGTC 886563 Query 105826 CTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGATCATTGA- 105884 | | ||| || |||||| | | | ||| | ||||| | || ||| | Sbjct 886562 CGAAATAATGTGAGACTTCATGGCTTCGTCCCATACACCAAGGTCAACAAGGTCACGTAG 886503 Query 105885 CGAG-ATGCTTGTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTT 105942 | || ||| |||||||||| ||||| || | || | | ||| || ||||| Sbjct 886502 CAAGTATGG--GTTGACAATCTGGAACTCACCGGACAGTACACGACG-AGAGTACATGTT 886446 Query 105943 CGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGG 106002 | ||||| || ||||| |||||||| |||||||| ||||| | || || || ||||| Sbjct 886445 AGATGTGTAAGGCTCAAAACATTCATTGTTACCCAAAATTTGCGAAGTAGATGCCGTTGG 886386 Query 106003 CATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAAC 106062 |||||| || | || || || | | ||| | || || ||||||| | Sbjct 886385 CATTGGCGCTAGCAGGAGCGAATTTCTGATACCATCTTTGACAATCTTGGCCTTGAGGCC 886326 Query 106063 ATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTT 106121 ||||||||| | | | |||| ||| |||| |||| |||||||| | | |||| Sbjct 886325 ATCCCAGTCCCACAAGTCGGTTGGCTTCTTGTTCC-ACATGTCAAATTGCAAAATACCTT 886267 Query 106122 GGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCA--GCCAATTCACA 106179 | || | || || ||| ||||||| ||||||| |||| ||||| || | |||| Sbjct 886266 GCGATGCTGGGGACCCCGCAAATGTTTCATAGGGTCCTTC--CTTCAAGGCTAGTTCATG 886209 Query 106180 GCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGC 106239 ||| || |||||||| ||||| || ||||| || |||| |||||| || Sbjct 886208 CGACGCAGTCAACCCAGCGTGATAAATGGTCTCGAAGATGTGAATGTTCAACTCCTTCGC 886149 Query 106240 TTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACAC 106298 ||| | ||||| || | | | ||| || || || |||| || ||||||||||| | Sbjct 886148 TTCTTGGGAATCGAAGG-GAATACGCAAAAGCATGAAAGCATCGGCAAGACCTTGAACCC 886090 Query 106299 CCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAAT 106358 | | |||| ||||| |||| ||||||||| |||| || |||||||| || ||| | | Sbjct 886089 CGAGGGCAATTGGTCTATGTCTCATATTAGATTTTCTGGCCGTCTCAACTGGGTAATAGT 886030 Query 106359 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTT 106418 | | ||| |||| || ||| | ||| | || || | ||||| || ||||||||||| | Sbjct 886029 TACGGTCGATGATTCTGTTCAAATTGTAAGTGACGACCTTTGCAATCTCATGAAGTTTCT 885970 Query 106419 CATAATCAAAAGTGCGAGTCT---CTTCATTGACATACTT----------TGGAAGGGCG 106465 || | | | |||||| | ||| | | || || ||| | | Sbjct 885969 CAAAGTTGTACCATTGAGTCTTGCCGTCA-TCAGATGTTTCGATGAATGCTGGCAAAGAA 885911 Query 106466 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 106525 || ||||| | ||| || || || || ||| | || | |||||| | ||| || Sbjct 885910 ATAGATGCAAGATTACAGACTGCAGTTTCACCAGGTTCAGAGTACTCAACAATCTCACAG 885851 Query 106526 CACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCA 106585 |||||||||||| || || || ||||||||||||||| ||| ||||||| || Sbjct 885850 CACAAGTTGGAAGATTTGATGACACCTAAATTCTTTTGGTTAGATTTTCTGTTGCATGCG 885791 Query 106586 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC 106645 || || || |||||| | || || || || || ||||||| | | || || | |||| Sbjct 885790 TCTTTATAAAGCATGAAAGGAGTACCAGTTTCAGTCTGTGCTTCTAAGATAGCGTACCAC 885731 Query 106646 A-CATCGGCGGCTGGTACAATGGCGT---TGGCCCGTCCCTCCGCCTCGTACTTTGTGTA 106701 | || | | || | |||| | | | || ||||| |||| || Sbjct 885730 AGTTTCTGAGCCTTG----ATGGTCTTTCTACCGCGACCCTCTTGAACGTAACGCTCATA 885675 Query 106702 GAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAA 106761 | || | ||||| || || |||| | | ||||| |||| | |||| | || Sbjct 885674 TAAAGCCACGAACTCATCGCCATAAACGTCCGCCAATCCTGGCGCCTCGCTTGGAGAAAA 885615 Query 106762 AAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGA 106821 | || ||| | || |||||| |||| ||||| ||||| ||||||||||| | | Sbjct 885614 CAAAGTCCAGTCTCCGTTCTCCTCGACCCTTTTCATAAAAAGATCTGGAATCCATAATGC 885555 Query 106822 TGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGA 106880 | || ||||| | ||| || ||||| | ||| || || || | || | | Sbjct 885554 AGGGAAAAGATCCCGGGCACGGA-TTTCTTCTTTACCGTGATTCTTCCGGATATCTATAA 885496 Query 106881 ACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGA 106936 | || | ||||| | |||||||||||| | ||| | || | || || |||| | Sbjct 885495 AGTCAAAAATATCGGAGTGCCATGGCTCCAAATAAATGGCAAAAGCACCAGGTCTTTTG- 885437 Query 106937 CGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATA 106996 ||| |||||| |||||||| || ||| |||||| || |||| ||| ||||| | Sbjct 885436 TTACCACCTTGATCGACATAGCGAGCAGTGTTGTTAAAAACACGAATCATAGGAATCAAT 885377 Query 106997 CCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATG 107056 |||| ||| ||| || || || || ||| | | || | | || ||| Sbjct 885376 CCATTGGATGTACCGTTGGTACCGGCGATGTAGGATCCCGTCGACCTGATGTTGTGAATG 885317 Query 107057 TGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAG 107116 |||| || ||||| || || ||| || || |||||||| | | ||| | ||| Sbjct 885316 TGCAATCCGATACCGCCGGCAGTCTTGGAAATCATTGCACACTCTTTCAAAGTATCGTAG 885257 Query 107117 ATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTT 107176 ||||| | ||| ||||| ||||| |||||| | || || |||||||| || Sbjct 885256 ATACCCTCGATGGAGTCATCCTTCATGGCGACCAAAAAACAGGACGACATCTGAGGGTGC 885197 Query 107177 GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTT 107235 || |||||||| ||||| |||||||| | || || | || ||| || ||||||| Sbjct 885196 GGCGTACCAGCGTTGAAAAGGGTTGGCGAGGCATGCGT-AAAATATCTGAGGGACATTAG 885138 Query 107236 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295 | ||| ||||| | || ||||| | ||||| ||||||| ||| |||||||| Sbjct 885137 ATTGTAAGTCTCGATCACCTTTTCAATATTGGTTCCGTGTATGCCGACGGCAACACGCAT 885078 >seq1 Length=824037 Score = 87.8 bits (96), Expect = 2e-12 Identities = 192/284 (68%), Gaps = 3/284 (1%) Strand=Plus/Plus Query 9359 TTGCTTTCCCAC-GGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGG 9417 || |||| ||| |||||| || ||||||| |||| ||| ||| ||| | | Sbjct 653599 TTTCTTTACCAATGGCATCTATTTCATCAACAAAGATAATGGCAGGTGCCATTTTTCTAG 653658 Query 9418 CGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGT 9477 || |||| || || ||||| || | || || |||||||||||||| || ||||| | Sbjct 653659 CGGTTTCGAATAGGTCGCGCACGCGGGATGCACCGACACCAACAAACATTTCAACAAATT 653718 Query 9478 TTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 9536 | | |||| ||| | || || || | |||||| || ||||| ||| ||| Sbjct 653719 CCGAGCCGGATACAGACAAA-AACGGCACCCCGGCTTCACCTGCCGTGGCTTTGGCCAGA 653777 Query 9537 AGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCA 9596 ||||||||||| ||||| || || | | | ||| || |||||||||||||| ||| Sbjct 653778 AGAGTCTTACCAGTACCGGGTGGTCCAGACAAAATGGCGCCACGTGGAATCTTGGCACCA 653837 Query 9597 CTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTC 9640 | | |||| | || |||| | | ||||| ||||| ||| Sbjct 653838 AGTGCTCTGTATTTGTCCGGTTTTTGCAAAAAATGCACAAACTC 653881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980741001920