Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq8 163 6e-35 seq6 156 9e-33 >seq8 Length=1778692 Score = 163 bits (180), Expect = 6e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||||||||||||||| ||||| || ||||| || | | ||| Sbjct 71418 TCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGT 71359 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | |||||||| || ||||| | || ||||||||| |||||||| || Sbjct 71358 TCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACC 71299 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| ||||| || || || |||||| || ||||||||||| ||| ||| ||||| | Sbjct 71298 TTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAA 71239 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 || | ||||| || ||||| || || || || Sbjct 71238 AGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 71206 >seq6 Length=1501435 Score = 156 bits (172), Expect = 9e-33 Identities = 171/225 (76%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAAT-CGGCAAGAG 194977 ||| || | ||| || | ||| | ||| || ||||||||||| ||||||| || |||| | Sbjct 435043 TCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAG-G 435101 Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||| |||||||| | ||| || || ||||| || | || ||||||||||||||| || | Sbjct 435102 TTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATAC 435161 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097 | |||||||| ||||| || ||| || || || |||||||| || ||| || || | Sbjct 435162 CCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACCTCGA 435221 Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 | |||| ||||||||| || | ||||| || || | ||||||| Sbjct 435222 GAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCATTT 435266 Score = 154 bits (170), Expect = 3e-32 Identities = 164/214 (77%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAAT-CGGCAAGAGTTCTCCCAT 194986 ||| || | ||| ||||| || ||||||||||| ||||||| || |||| ||||| |||| Sbjct 434055 CAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGACAAG-GTTCTACCAT 434113 Query 194987 CTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGT 195046 |||| | ||| || || ||||| || | || ||||||||||||||| || || ||||||| Sbjct 434114 CTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGT 434173 Query 195047 CTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCG 195106 | ||||| || ||| || || || || ||||| ||| ||| || || || |||| || Sbjct 434174 CCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCG 434233 Query 195107 TCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||||| || | || || ||||| | ||||| Sbjct 434234 TCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267 Score = 149 bits (164), Expect = 1e-30 Identities = 163/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAAT-CGGCAAGAGTTCTCCCAT 194986 ||| || | ||| | ||| || ||||||||||| ||||||| || |||| ||||| |||| Sbjct 434824 CAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAG-GTTCTACCAT 434882 Query 194987 CTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGT 195046 |||| | ||| || || ||||| || | || ||||||||||||||| || || ||||||| Sbjct 434883 CTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGT 434942 Query 195047 CTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCG 195106 | ||||| || ||| || || || || ||||| ||| ||| || || || |||| || Sbjct 434943 CCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCG 435002 Query 195107 TCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||||| || | || || ||||| | ||||| Sbjct 435003 TCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036 Score = 98.7 bits (108), Expect = 2e-15 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| || | ||| || | ||| | ||| || ||||||||||| |||||||| | | || Sbjct 434274 TCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCAGACAATGT 434333 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | |||||| || || |||||||| | || || || ||||| || || Sbjct 434334 TCTACCATCTTCTAACTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATACC 434393 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || ||||| ||||| || ||| || || || || |||| Sbjct 434394 CTCCTTGTCCTGAATCTTGGACTTCACATTATCGATAATGTC 434435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481486278136