Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq8 163 6e-35
seq6 156 9e-33
>seq8
Length=1778692
Score = 163 bits (180), Expect = 6e-35
Identities = 164/213 (77%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| | |||||| || | ||||||||||||||| ||||| || ||||| || | | |||
Sbjct 71418 TCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGT 71359
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | |||||||| || ||||| | || ||||||||| |||||||| ||
Sbjct 71358 TCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACC 71299
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| ||||| || || || |||||| || ||||||||||| ||| ||| ||||| |
Sbjct 71298 TTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAA 71239
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| | ||||| || ||||| || || || ||
Sbjct 71238 AGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 71206
>seq6
Length=1501435
Score = 156 bits (172), Expect = 9e-33
Identities = 171/225 (76%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAAT-CGGCAAGAG 194977
||| || | ||| || | ||| | ||| || ||||||||||| ||||||| || |||| |
Sbjct 435043 TCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAG-G 435101
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||| |||||||| | ||| || || ||||| || | || ||||||||||||||| || |
Sbjct 435102 TTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATAC 435161
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
| |||||||| ||||| || ||| || || || |||||||| || ||| || || |
Sbjct 435162 CCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACCTCGA 435221
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142
| |||| ||||||||| || | ||||| || || | |||||||
Sbjct 435222 GAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCATTT 435266
Score = 154 bits (170), Expect = 3e-32
Identities = 164/214 (77%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAAT-CGGCAAGAGTTCTCCCAT 194986
||| || | ||| ||||| || ||||||||||| ||||||| || |||| ||||| ||||
Sbjct 434055 CAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGACAAG-GTTCTACCAT 434113
Query 194987 CTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGT 195046
|||| | ||| || || ||||| || | || ||||||||||||||| || || |||||||
Sbjct 434114 CTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGT 434173
Query 195047 CTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCG 195106
| ||||| || ||| || || || || ||||| ||| ||| || || || |||| ||
Sbjct 434174 CCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCG 434233
Query 195107 TCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||||| || | || || ||||| | |||||
Sbjct 434234 TCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267
Score = 149 bits (164), Expect = 1e-30
Identities = 163/214 (76%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAAT-CGGCAAGAGTTCTCCCAT 194986
||| || | ||| | ||| || ||||||||||| ||||||| || |||| ||||| ||||
Sbjct 434824 CAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAG-GTTCTACCAT 434882
Query 194987 CTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGT 195046
|||| | ||| || || ||||| || | || ||||||||||||||| || || |||||||
Sbjct 434883 CTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGT 434942
Query 195047 CTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCG 195106
| ||||| || ||| || || || || ||||| ||| ||| || || || |||| ||
Sbjct 434943 CCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCG 435002
Query 195107 TCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||||| || | || || ||||| | |||||
Sbjct 435003 TCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036
Score = 98.7 bits (108), Expect = 2e-15
Identities = 119/162 (73%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || | ||| || | ||| | ||| || ||||||||||| |||||||| | | ||
Sbjct 434274 TCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCAGACAATGT 434333
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
||| |||||||| | |||||| || || |||||||| | || || || ||||| || ||
Sbjct 434334 TCTACCATCTTCTAACTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATACC 434393
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTC 195080
|| ||||| ||||| || ||| || || || || ||||
Sbjct 434394 CTCCTTGTCCTGAATCTTGGACTTCACATTATCGATAATGTC 434435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109481486278136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |