Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq6 105 4e-18
>seq6
Length=1501435
Score = 105 bits (116), Expect = 4e-18
Identities = 164/232 (71%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
||||| ||||| | ||| || ||||| | || |||||| |||||||| || |||||
Sbjct 434041 CCTCCTCTCAAACGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434100
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
| | ||| |||| |||| |||||| || || || || | || ||| |||||| | ||
Sbjct 434101 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 434160
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930
| ||||| ||||| |||||| || || || ||||||| || | ||
Sbjct 434161 ATACCCTCTTTGTCCTGAATCTTGGACTTCAC--AT--TATCGATAGTGTCGGAAGATTC 434216
Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||| |||| || || || ||||||||||| ||||| || || |||||||||
Sbjct 434217 AACCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCATA 434268
Score = 102 bits (112), Expect = 5e-17
Identities = 163/232 (70%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
|| || ||||| | ||| || ||||| | || |||||| |||||||| || |||||
Sbjct 434810 CCACCTCTCAAACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434869
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
| | ||| |||| |||| |||||| || || || || | || ||| |||||| | ||
Sbjct 434870 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 434929
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTC 34930
| ||||| ||||| |||||| || || || ||||||| || | ||
Sbjct 434930 ATACCCTCTTTGTCCTGAATCTTGGACTTCAC--AT--TATCGATAGTGTCGGAAGATTC 434985
Query 34931 AACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
||| |||| || || || ||||||||||| ||||| || || |||||||||
Sbjct 434986 AACCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCATA 435037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324633568348224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |