Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq8 208 6e-48
seq4 127 2e-23
seq6 104 2e-16
>seq8
Length=1778692
Score = 208 bits (230), Expect = 6e-48
Identities = 569/859 (66%), Gaps = 28/859 (3%)
Strand=Plus/Minus
Query 551745 CTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTT 551804
|| || ||| ||||||| ||| | || || ||||| ||| || ||||| |
Sbjct 1126529 CTACTGTCTATCGAAGACGGTATTTTCGAAGTCAAGGCTACCGCTGGTGACACTCATTTG 1126470
Query 551805 GGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTTTAAACGAA 551862
||||| |||||||| || || ||| |||| | || | || |||| || || |||
Sbjct 1126469 GGTGGTGAAGATTTCGACAACAGATTGGTCAACCAC--TTCGTCCAAGAATTCAAGAGAA 1126412
Query 551863 AAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTC--GTCTAAGAACTGCTTG 551920
| ||||| || | | || | |||||| |||| | | | |||||||| ||
Sbjct 1126411 AGAACAAGAAGGACTTGACCAC--CAACCAAAGATCTTTGAGAAGATTGAGAACTGCATG 1126354
Query 551921 CGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATT 551980
|| |||||||| || || | || ||| | |||||||| | ||||| | || || ||
Sbjct 1126353 TGAGAGAGCCAAGAGAACTTTGTCCTCTTCTGCTCAAACCTCCATTGAGATCGACTCTTT 1126294
Query 551981 ATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTC 552040
|| || || || || | | || |||| | || |||| ||||||||| | ||| |
Sbjct 1126293 GTTCGAAGGTATCGACCTTTACACCTCTATCACCAGAGCCAGATTTGAAGAATTGTGTGC 1126234
Query 552041 TGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGA 552100
||| | || ||| || | || || || || | || || ||||| | || | ||
Sbjct 1126233 TGACTTGTTCAGATCCACTTTGGACCCTGTTGAGAAGGTCTTGAGAGACGCTAAATTGGA 1126174
Query 552101 TAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCG 552160
|| || || || ||||| || ||||||||||| ||||| |||||||| || |||
Sbjct 1126173 CAAGTCTGCCGTTCACGAAATCGTTCTTGTTGGTGGTTCTACCAGAATTCCAAAGGTTC- 1126115
Query 552161 CGAAATGTTAAGTTCT---TATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGA 552217
||| | | ||| || ||||| ||||| || || | | || || ||
Sbjct 1126114 --AAAAGCTTGTCTCTGACTACTTCAACGGTAAGGAACCCAACAGATCCATCAACCCTGA 1126057
Query 552218 TGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG--GACAAACTGAT 552275
||| |||||||| || ||||| || ||||||| || || | ||| ||| || | |
Sbjct 1126056 TGAAGCTGTTGCTTACGGTGCTGCCGTTCAAGCCGCCATCTTGACTGGTGACGAA-TCTT 1125998
Query 552276 GAAAAACTACAAAATATTGTACTTG-TAGATGTTACTCCTCTATCTCTTGGTTTAGAAAC 552334
|| ||| ||| | |||| ||| | ||||| ||||||||||||||||| | |||||
Sbjct 1125997 CGAAGACT-CAAGA-CTTGTTGTTGTTGGATGTCGCTCCTCTATCTCTTGGTATTGAAAC 1125940
Query 552335 AGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATC 552394
| ||| ||| | ||||| || | || ||||| |||||||||| || || ||
Sbjct 1125939 CGCTGGTGGTGTCATGACCAAGTTGATTCCAAGAAACTCTACTATTCCAACCAAGAAGTC 1125880
Query 552395 TCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGG 552454
| || || || || || | || || ||| | | ||| |||||| | ||||||||
Sbjct 1125879 TGAAGTTTTCTCCACTTACGCCGACAACCAACCAGGTGTGTTGATTCAAGTGTTTGAAGG 1125820
Query 552455 AGAAAGAAAATTCACTAAAGATAATAATCAACTT----GGTACTTTTAATTTAGAAGGTA 552510
|||||| ||||| || || |||||| |||| ||| | || ||||
Sbjct 1125819 TGAAAGAGCTAAGACTAAGGACAA----CAACTTGTTGGGTAAGTTTGACTTGAGCGGTA 1125764
Query 552511 TTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATG 552570
| || |||||||| | || || || ||||| ||||| ||||||||| | || ||||| |
Sbjct 1125763 TCCCACCTGCTCCAAGAGGTGTCCCACAAATCGAAGTCACTTTCGATGTTGACGCCAACG 1125704
Query 552571 GAATTTTGAATGTGACTGC 552589
| |||||||| || ||||
Sbjct 1125703 GTATTTTGAACGTCTCTGC 1125685
>seq4
Length=1207720
Score = 127 bits (140), Expect = 2e-23
Identities = 345/524 (66%), Gaps = 8/524 (2%)
Strand=Plus/Minus
Query 368583 TGATTGGTGTATTTCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGA 368642
||||||| | |||| |||| || | ||||| |||||||||||| | ||| |||||
Sbjct 457922 TGATTGGAATGTTTCTAGAAACAGATACTGGGGTACTCCAATTCCACTCTGGGTCTCTGA 457863
Query 368643 TGATGGTGAAGAAATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGGTGT 368702
|| || |||||||||||| | ||||| | | ||| | | |||| || || ||
Sbjct 457862 AGACTACGAGGAAATTGTTTGTGTTGGTTCTGTCGAGGAACTTGAGAAATTGTCAGGCGT 457803
Query 368703 GCAAAATATTAGTGATTTACATATTGATAAAATTGATCACATTAAAATTCCATCAAAGAA 368762
| ||||| ||||| || |||| || ||| |||| | |||||| || ||| |
Sbjct 457802 CACAGGTATTACCGATTTGCACCGTGATTCTATCGATAACATAAGAATTCCCTCTAAGCA 457743
Query 368763 AGGAAAAGGTTTATTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGGTTC 368822
|||||| ||| | || || |||| | |||||| || |||||||| ||||| |||||
Sbjct 457742 AGGAAAGGGTGAACTGAAAAGAATTGAGGAAGTTTTTGACTGCTGGTTCGAATCTGGTTC 457683
Query 368823 TATGCCTTATG-GTCAAATACATTATCCATTTGATAACGCAAAATACTTTGATAATGATA 368881
||||| | || ||| | |||||| ||||| || ||| | || | || ||| ||||
Sbjct 457682 CATGCCCTTTGCGTCCCA-ACATTACCCATTCGAAAACACCGAAAAATT---TAAAGATA 457627
Query 368882 AAGATTATGTGGCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTATA 368941
|| | || |||| | | ||| | |||||||| | ||||||||||| |
Sbjct 457626 GAG---TTCCAGCGAATTTCATCTCTGAAGGTTTGGATCAAACGAGGGGTTGGTTTTACA 457570
Query 368942 CCCTATTAGTATTATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAATGTAATAGTAA 369001
| | || || || || |||| || ||| ||||||| || || |
Sbjct 457569 CTTTGGGTGTTTTGGGTACTCAAATATTCGGTACTGTTCCTTACCAAAATGTTATCGTTA 457510
Query 369002 CTGGTATTGTTAATGCATCTGATGGTCAAAAGATGTCAAAAAGTAAGGGTAATTATTCCG 369061
| ||||| | || | |||||| |||| ||||| || ||| | |||||| | |
Sbjct 457509 CGGGTATCATCTTGGCTGCCGATGGTAAAAAAATGTCCAAGAGTTTGAAAAATTATCCTG 457450
Query 369062 ATCCTAATATTTTAATTGATAAATTTGGTGCTGATACTTTGAGA 369105
|||| || | | | | |||| ||||| ||| ||||||||
Sbjct 457449 ATCCGAACTTGATCTTGAACAAATACGGTGCCGATGCTTTGAGA 457406
>seq6
Length=1501435
Score = 104 bits (114), Expect = 2e-16
Identities = 351/539 (65%), Gaps = 12/539 (2%)
Strand=Plus/Minus
Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054
|| ||||| ||||| || ||||| ||| ||||| | || | | || || |||
Sbjct 1089447 ATCGGTATCGATTTGGGTACCACGTATTCGTGTGTCGCGGTCATGAAGAACGGCAAAACC 1089388
Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114
|| ||| | |||||||| ||||||||||||| || || || || || |||| ||||||
Sbjct 1089387 GAGATTTTGGCCAATGAACAAGGTAACAGAATCACACCCTCGTACGTGGCTTTTACGGAA 1089328
Query 550115 -ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATAC 550173
|| || | | | | |||||||| ||||| | |||| ||| |||||||| || ||
Sbjct 1089327 GACGAAAGACTCA-TCGGTGATGCGGCAAAGAACCAAGTGGCTGCTAATCCTAAAAACAC 1089269
Query 550174 TATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGA 550233
|||| ||| | || | || ||||| | ||| || || | | || || ||
Sbjct 1089268 GATTTATGACGTCAAGAGATTCATTGGGTTACGTTACAACGACAAGTCCGTACAAAGGGA 1089209
Query 550234 TATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTAC 550293
||||||||| || || | | ||||| || ||||| | | ||| |
Sbjct 1089208 CTTGAAGCATTTACCCTTTGAGGTGGTTAACAAAGACGGGAAACC-GGTCGTCAAGGTCG 1089150
Query 550294 TCATGAAGGATCTGTTAA-ACAA--TTTTCA--CCAGAACAAATTTCATCTATGGTTTTA 550348
| |||| | || |||| | |||| || ||| || | || | ||| ||||
Sbjct 1089149 AGGTTAAGG----GCGAAGACAAATTATTCACTCCCGAAGAAGTCTCTGCGATGATTTTG 1089094
Query 550349 ATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATA 550408
|||||||| |||| || | || | | || || ||||||| | || || |
Sbjct 1089093 GGTAAAATGAAGCAAATCGCTGAAGATTATTTGGGCAAAAAAGTTACTCACGCCGTGGTC 1089034
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
||||| || || || || |||||| | ||| | |||||||| |||||||| || ||
Sbjct 1089033 ACTGTGCCTGCGTACTTCAATGACGCGCAAAGACAAGCTACCAAAGATGCCGGTACCATC 1088974
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527
|| || || || || | | ||| | || ||||||||||| ||||| |||| || ||
Sbjct 1088973 GCGGGGCTCAACATTTTGAGAATTGTGAACGAACCTACTGCCGCTGCTATTGCGTACGG 1088915
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029295576923920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |