Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq8 161 2e-34
seq5 136 7e-27
>seq8
Length=1778692
Score = 161 bits (178), Expect = 2e-34
Identities = 415/616 (67%), Gaps = 26/616 (4%)
Strand=Plus/Plus
Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTC-TATCCA 25570
|||||| || || ||||| ||| || |||||||| || ||| |||| || | ||| |
Sbjct 705150 CTGGACGGCAGAGGAGATCGATTTGTCCAAGGACTTGCACGACTGGAACAACCGTATGAA 705209
Query 25571 A-AGA-CGAGCAGCATTTTCT--CAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGT 25626
||| ||||| | || || || || ||| | || || || || || || || |||
Sbjct 705210 CGAGAACGAGCGGTTCTTCCTTTCACGT--GTGCTTGCGTTTTTCGCTGCTTCGGACGGT 705267
Query 25627 ATAGTGAACGAGAATCT-GTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAA 25685
|| |||||||| ||||| ||| || | ||| || |||||||| ||||||||
Sbjct 705268 ATTGTGAACGAAAATCTCGTG-GAAAACTTCTCCGCAGAAGTGCAAATTCCAGAGGCCAA 705326
Query 25686 GTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCT 25745
||||||||||| |||||||| || || || | ||||| || ||| | |||
Sbjct 705327 ATGTTTCTACGGGTTCCAGATCATGATGGAGAACATCCACTCCGAAACGTACTCGTTGCT 705386
Query 25746 TCT-GATGACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGT----GCCATC 25800
| ||| || ||||| | ||| || | |||| || | |||| | || ||
Sbjct 705387 CATCGAT-ACCTACATCAAGGAC----CCTAAGGAGAACGAATTTTTGTTCAATGCGATT 705441
Query 25801 GAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGAT-CAACA-GCC 25858
||| |||| ||| || || |||||| ||||| || | ||||| || | | |
Sbjct 705442 GAGAACATCCCCCAGATAAAAGAGAAGGCCGAATGGGCGATCAGATGGATTCAGGACGAC 705501
Query 25859 AGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCA 25918
|||| | ||| | || ||||| ||||| || || ||||| || || | ||||||
Sbjct 705502 GAAGCGTT--GTTCGCGGAACGGCTCGTAGCGTTCGCCGCTGTCGAAGGTGTGTTTTTCT 705559
Query 25919 GCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACT 25978
||||||||||||||||| |||||| | || ||||||| |||||||| || |
Sbjct 705560 CAGGTTCGTTTGCGGCCATTTTCTGGTTGAAAAAGAAGGGTCTTATGCCCGGACTCACGT 705619
Query 25979 TTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038
| || |||||||| || |||| ||||| ||| | |||| ||| || || ||| || | |
Sbjct 705620 TCTCGAACGAGCTTATTTGCAGAGACGAAGGTTTGCACACAGACTTCGCGTGCTTGTTGT 705679
Query 26039 ACACGGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGG 26098
|| |||||| |||| || || ||| |||| | | ||||||| ||||
Sbjct 705680 TTGCG---CACTTGAAAAACAAGCCAGATCCCAAGATCGTCGAACGAATCATCACGGAGG 705736
Query 26099 CTGTGGAGATCGAGAA 26114
|||| |||||||| ||
Sbjct 705737 CTGTCGAGATCGAAAA 705752
>seq5
Length=1414338
Score = 136 bits (150), Expect = 7e-27
Identities = 452/691 (65%), Gaps = 18/691 (3%)
Strand=Plus/Minus
Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058
||| | | || | |||||| ||| || | |||||| | ||| || || || || |||
Sbjct 885622 GGAGAAAACAAAGTCCAGTCTCCGTTCTCCTCGACCCTTTTCATAAAAAGATCTGGAATC 885563
Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118
|| | || | || ||||| | || || || || |||| || |||| | |
Sbjct 885562 CATAATGCAGGGAAAAGATCCCGGGCACGGATTTCTTCTTTACCGTGATTCTTCCGGATA 885503
Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178
|| | ||| |||||||| || | |||||| ||||||| ||| | ||| | ||| || |||
Sbjct 885502 TCTATAAAGTCAAAAATATCGGAGTGCCATGGCTCCAAATAAATGGCAAAAGCACCAGGT 885443
Query 222179 CGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGG 222237
| ||||| ||||| ||||| || || ||| | ||| || | |||| | ||
Sbjct 885442 CTTTTGTTACCACCTTGATCGAC-ATAGCGAGCAGTGTTGTTAAAAACACGAATCATAGG 885384
Query 222238 TACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT 222297
| || ||| |||||| ||||||||| || ||||| | || | ||| | |||
Sbjct 885383 AATCAATCCATTGGATGTACCGTTGGTACCGGCGATGTAGGATCCCGTCGACCTGATGTT 885324
Query 222298 ---ACTG-GCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTG- 222352
| || ||| || |||||||| ||||| || || ||||| || || |||||
Sbjct 885323 GTGAATGTGCA---AT-CCGATACCGCCGGCAGTCTTGGAAATCATTGCACA-CTCTTTC 885269
Query 222353 AGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGAC 222412
| ||| || ||| ||||| || ||||| ||||| | | | || |||||| ||||||
Sbjct 885268 AAAGTATCGTAGATACCCTCGATGGAGTCATCCTTCATGGCGACCAAAAAACAGGACGAC 885209
Query 222413 ATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCC 222472
||||||| | | | || ||||| || || || || ||| || ||||| || |
Sbjct 885208 ATCTGAGGGTGCGGCGTACCAGCGTTGAAAAGGGTTGGCGAGGCATGCGTAAAATATCTG 885149
Query 222473 CTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATG 222532
||||| |||| ||| ||||| | || | | || ||| ||||| || | |
Sbjct 885148 AGGGACATTAGATTGTAAGTCTCGATCACCTTTTCAATATTGGTTCCGTGTATGCCGACG 885089
Query 222533 GCGCATCTCATGTACATGTACTGGGGCC--TC-TCCACAGGACCCTTGGAGCTGGAGAGC 222589
|| | |||| | || || || | || | || |||| ||| || |
Sbjct 885088 GCAACACGCATGACAAGGTGTTGTGGACGTTCGGCGACCTGACCATTGATTCT---CAAT 885032
Query 222590 AGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGA 222649
|||||||| ||||| ||||||||||| || |||||| | |||||||||| |||
Sbjct 885031 AGGTACGAGCGCTCCAGCGTCTTGAACCCGAAATAGTTGTATTGAAAGTCTCTGTCGTAG 884972
Query 222650 ACCACGGCGGCGTCCAGCTCCGACTTGTGCT 222680
|| | ||| | || |||||| ||||||||
Sbjct 884971 ACGATGGCCGAGTTCAGCTCATCCTTGTGCT 884941
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844707115520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |