Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq8 161 2e-34 seq5 136 7e-27 >seq8 Length=1778692 Score = 161 bits (178), Expect = 2e-34 Identities = 415/616 (67%), Gaps = 26/616 (4%) Strand=Plus/Plus Query 25512 CTGGACCGCCGAAGAGATTGATCTGGCCAAGGACATGGACGGCTGGTACGCTC-TATCCA 25570 |||||| || || ||||| ||| || |||||||| || ||| |||| || | ||| | Sbjct 705150 CTGGACGGCAGAGGAGATCGATTTGTCCAAGGACTTGCACGACTGGAACAACCGTATGAA 705209 Query 25571 A-AGA-CGAGCAGCATTTTCT--CAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGT 25626 ||| ||||| | || || || || ||| | || || || || || || || ||| Sbjct 705210 CGAGAACGAGCGGTTCTTCCTTTCACGT--GTGCTTGCGTTTTTCGCTGCTTCGGACGGT 705267 Query 25627 ATAGTGAACGAGAATCT-GTGCGAGAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAA 25685 || |||||||| ||||| ||| || | ||| || |||||||| |||||||| Sbjct 705268 ATTGTGAACGAAAATCTCGTG-GAAAACTTCTCCGCAGAAGTGCAAATTCCAGAGGCCAA 705326 Query 25686 GTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCT 25745 ||||||||||| |||||||| || || || | ||||| || ||| | ||| Sbjct 705327 ATGTTTCTACGGGTTCCAGATCATGATGGAGAACATCCACTCCGAAACGTACTCGTTGCT 705386 Query 25746 TCT-GATGACGTACATTACAGACGTCGCCGAGAGAGATCGGCTGTTTGGT----GCCATC 25800 | ||| || ||||| | ||| || | |||| || | |||| | || || Sbjct 705387 CATCGAT-ACCTACATCAAGGAC----CCTAAGGAGAACGAATTTTTGTTCAATGCGATT 705441 Query 25801 GAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGAT-CAACA-GCC 25858 ||| |||| ||| || || |||||| ||||| || | ||||| || | | | Sbjct 705442 GAGAACATCCCCCAGATAAAAGAGAAGGCCGAATGGGCGATCAGATGGATTCAGGACGAC 705501 Query 25859 AGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCA 25918 |||| | ||| | || ||||| ||||| || || ||||| || || | |||||| Sbjct 705502 GAAGCGTT--GTTCGCGGAACGGCTCGTAGCGTTCGCCGCTGTCGAAGGTGTGTTTTTCT 705559 Query 25919 GCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACT 25978 ||||||||||||||||| |||||| | || ||||||| |||||||| || | Sbjct 705560 CAGGTTCGTTTGCGGCCATTTTCTGGTTGAAAAAGAAGGGTCTTATGCCCGGACTCACGT 705619 Query 25979 TTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038 | || |||||||| || |||| ||||| ||| | |||| ||| || || ||| || | | Sbjct 705620 TCTCGAACGAGCTTATTTGCAGAGACGAAGGTTTGCACACAGACTTCGCGTGCTTGTTGT 705679 Query 26039 ACACGGGCCACTTGCTCCACAAACCTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGG 26098 || |||||| |||| || || ||| |||| | | ||||||| |||| Sbjct 705680 TTGCG---CACTTGAAAAACAAGCCAGATCCCAAGATCGTCGAACGAATCATCACGGAGG 705736 Query 26099 CTGTGGAGATCGAGAA 26114 |||| |||||||| || Sbjct 705737 CTGTCGAGATCGAAAA 705752 >seq5 Length=1414338 Score = 136 bits (150), Expect = 7e-27 Identities = 452/691 (65%), Gaps = 18/691 (3%) Strand=Plus/Minus Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058 ||| | | || | |||||| ||| || | |||||| | ||| || || || || ||| Sbjct 885622 GGAGAAAACAAAGTCCAGTCTCCGTTCTCCTCGACCCTTTTCATAAAAAGATCTGGAATC 885563 Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118 || | || | || ||||| | || || || || |||| || |||| | | Sbjct 885562 CATAATGCAGGGAAAAGATCCCGGGCACGGATTTCTTCTTTACCGTGATTCTTCCGGATA 885503 Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178 || | ||| |||||||| || | |||||| ||||||| ||| | ||| | ||| || ||| Sbjct 885502 TCTATAAAGTCAAAAATATCGGAGTGCCATGGCTCCAAATAAATGGCAAAAGCACCAGGT 885443 Query 222179 CGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGC-GTTGAAGATGCGAAGGGTCGG 222237 | ||||| ||||| ||||| || || ||| | ||| || | |||| | || Sbjct 885442 CTTTTGTTACCACCTTGATCGAC-ATAGCGAGCAGTGTTGTTAAAAACACGAATCATAGG 885384 Query 222238 TACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT 222297 | || ||| |||||| ||||||||| || ||||| | || | ||| | ||| Sbjct 885383 AATCAATCCATTGGATGTACCGTTGGTACCGGCGATGTAGGATCCCGTCGACCTGATGTT 885324 Query 222298 ---ACTG-GCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTG- 222352 | || ||| || |||||||| ||||| || || ||||| || || ||||| Sbjct 885323 GTGAATGTGCA---AT-CCGATACCGCCGGCAGTCTTGGAAATCATTGCACA-CTCTTTC 885269 Query 222353 AGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGAC 222412 | ||| || ||| ||||| || ||||| ||||| | | | || |||||| |||||| Sbjct 885268 AAAGTATCGTAGATACCCTCGATGGAGTCATCCTTCATGGCGACCAAAAAACAGGACGAC 885209 Query 222413 ATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCC 222472 ||||||| | | | || ||||| || || || || ||| || ||||| || | Sbjct 885208 ATCTGAGGGTGCGGCGTACCAGCGTTGAAAAGGGTTGGCGAGGCATGCGTAAAATATCTG 885149 Query 222473 CTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATCTGCATG 222532 ||||| |||| ||| ||||| | || | | || ||| ||||| || | | Sbjct 885148 AGGGACATTAGATTGTAAGTCTCGATCACCTTTTCAATATTGGTTCCGTGTATGCCGACG 885089 Query 222533 GCGCATCTCATGTACATGTACTGGGGCC--TC-TCCACAGGACCCTTGGAGCTGGAGAGC 222589 || | |||| | || || || | || | || |||| ||| || | Sbjct 885088 GCAACACGCATGACAAGGTGTTGTGGACGTTCGGCGACCTGACCATTGATTCT---CAAT 885032 Query 222590 AGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGA 222649 |||||||| ||||| ||||||||||| || |||||| | |||||||||| ||| Sbjct 885031 AGGTACGAGCGCTCCAGCGTCTTGAACCCGAAATAGTTGTATTGAAAGTCTCTGTCGTAG 884972 Query 222650 ACCACGGCGGCGTCCAGCTCCGACTTGTGCT 222680 || | ||| | || |||||| |||||||| Sbjct 884971 ACGATGGCCGAGTTCAGCTCATCCTTGTGCT 884941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844707115520