Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq8 239 3e-57 seq6 113 3e-19 seq4 107 1e-17 >seq8 Length=1778692 Score = 239 bits (264), Expect = 3e-57 Identities = 649/979 (66%), Gaps = 27/979 (3%) Strand=Plus/Minus Query 475329 TACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTG 475388 |||| || ||||||| ||| ||||| || | || || ||||| || | ||| | | Sbjct 1126528 TACTGTCTATCGAAGACGGTATTTTCGAAGTCAAGGCTACCGCTGGTGACACTCATTTGG 1126469 Query 475389 GTGGTGAAGATTTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAA 475446 ||||||||||||| || || ||| | || | || | || |||| |||||||| || Sbjct 1126468 GTGGTGAAGATTTCGACAACAGATTGGTCAACCAC--TTCGTCCAAGAATTCAAGAGAAA 1126411 Query 475447 AAATAAAGTTGATCTTTCAACATCTGCTAAAG--CATTAAGACGTCTTAGAACTGCTTGT 475504 || || || || | || | | |||| | || ||| | | |||||||| ||| Sbjct 1126410 GAACAAGAAGGAC--TTGACCACCAACCAAAGATCTTTGAGAAGATTGAGAACTGCATGT 1126353 Query 475505 GAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTT 475564 || | || ||| || || | || ||| || ||||||| | |||| | || ||| | Sbjct 1126352 GAGAGAGCCAAGAGAACTTTGTCCTCTTCTGCTCAAACCTCCATTGAGATCGACTCTTTG 1126293 Query 475565 TTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCT 475624 || ||||| || || | | || ||| || || || | ||||||||| | ||| || Sbjct 1126292 TTCGAAGGTATCGACCTTTACACCTCTATCACCAGAGCCAGATTTGAAGAATTGTGTGCT 1126233 Query 475625 GATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGAC 475684 || | || ||| || | || || ||||| | || | ||||| ||||| | ||| Sbjct 1126232 GACTTGTTCAGATCCACTTTGGACCCTGTTGAGAAGGTCTTGAGAGACGCTAAATTGGAC 1126173 Query 475685 AAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGA 475744 || || || || ||||| |||||||| || ||||| || ||||||||||| | Sbjct 1126172 AAGTCTGCCGTTCACGAAATCGTTCTTGTTGGTGGTTCTACCAGAATTCCAAAGGTTC-- 1126115 Query 475745 GAAATGCTTTCATCA---TATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGAT 475801 ||| |||| || || || || ||||| | || | | || |||||| Sbjct 1126114 -AAAAGCTTGTCTCTGACTACTTCAACGGTAAGGAACCCAACAGATCCATCAACCCTGAT 1126056 Query 475802 GAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCA---ATCAGAC 475858 ||||||||||| || || ||||| || ||||| || || || | ||| | ||| | Sbjct 1126055 GAAGCTGTTGCTTACGGTGCTGCCGTTCAAGCCGCCATCTTGACTGGTGACGAATCTT-C 1125997 Query 475859 GAGAAACTAAATAATATTGTACTTGTTG-ACGTAACTCCACTTTCATTAGGTCTTGAAAC 475917 || | ||| || | | ||| |||||| | || |||| || || | ||| ||||||| Sbjct 1125996 GA-AGACTCAAGACT--TGTTGTTGTTGGATGTCGCTCCTCTATCTCTTGGTATTGAAAC 1125940 Query 475918 AGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATC 475977 | ||| || | ||||| || | ||| ||||| || |||| ||| ||| || || Sbjct 1125939 CGCTGGTGGTGTCATGACCAAGTTGATTCCAAGAAACTCTACTATTCCAACCAAGAAGTC 1125880 Query 475978 AAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGG 476037 |||| || |||||||| | || || ||| || ||| || ||| | |||||||| Sbjct 1125879 TGAAGTTTTCTCCACTTACGCCGACAACCAACCAGGTGTGTTGATTCAAGTGTTTGAAGG 1125820 Query 476038 TGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGA-AGGTATTC 476096 ||||||| ||||| || || ||| | || | ||| | ||||| ||||| | Sbjct 1125819 TGAAAGAGCTAAGACTAAGGACAACAACTTGTTGGGTAAGTTTGA-CTTGAGCGGTATCC 1125761 Query 476097 CTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTA 476156 | |||||||| ||||| || || ||||| ||||| ||||| ||| |||| || || |||| Sbjct 1125760 CACCTGCTCCAAGAGGTGTCCCACAAATCGAAGTCACTTTCGATGTTGACGCCAACGGTA 1125701 Query 476157 TTCTTAATGTTACTGCTTGTGATAAATCTAGTAACAAGAGTAAAAATATAACTATTACAA 476216 || | || || |||| ||| || || | ||| | |||| || ||||| || | Sbjct 1125700 TTTTGAACGTCTCTGCGGTTGAAAAGGGTACTGGTAAGTCTGAAAAGATCACTATCACCA 1125641 Query 476217 ACAATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGTTGATGAAGCCAAAGAGT 476276 || | |||||||| || | ||| | ||| | | |||||| || ||| | ||| Sbjct 1125640 ACGACAAGGGTAGATTGACCAAGGAAGACATTGAGAGAATGGTTTCCGAGGCCGAGAAGT 1125581 Query 476277 T---TGAAGAAGCTGATAA 476292 | ||||||| ||| || Sbjct 1125580 TCAAGGAAGAAGATGAGAA 1125562 Score = 105 bits (116), Expect = 4e-17 Identities = 353/541 (65%), Gaps = 15/541 (3%) Strand=Plus/Minus Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| | || || ||||||||||| ||||| || ||||| | ||| | || || Sbjct 1127078 GTGGAAATCTTGGCTAACGACCAAGGTAACAGAACCACTCCATCTTTCGTTGCCTTCACC 1127019 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || ||| | || || |||||||| || | |||||||| || || | || Sbjct 1127018 GACACCGAAAGATTGATCGGTGATGCTGCCAAGAACCAAGCTGCCATGAACCCAGCCAAC 1126959 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 || |||| || || || | ||||| ||| | || || || | |||||| | Sbjct 1126958 ACCGTTTTCGACGCCAAGCGTTTGATAGGTAGAAACTTCACCGACGCTGAAGTCCAAGGT 1126899 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAAC--CATATATAGAAG 474626 || || || | || || ||||| | | || |||||||| | || || || Sbjct 1126898 GACATCAAGCACTTCCCATTCAAGGTTGTCGACGTCGGTGGTAAGCCTCAAATCCAGGTC 1126839 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAG 474686 |||||| | ||||| || ||| || | || || || | || || ||| |||| | Sbjct 1126838 GAATACAAG--GGTGAGACCAAAGTCTTCACTCCTGAGGAAGTCTCCTCTATGATTTTGG 1126781 Query 474687 CCAAAATGAAACAAACCGC-GAGCTCATATCTTGG---ACAAGAAGTAACTGATGCAGTA 474742 || ||||| | ||||| || | || ||||| |||| || | || || || Sbjct 1126780 GTAAGATGAAGGAGACCGCTGAAAAC-TA-CTTGGGTTGCAAG--GTCAACGACGCTGTC 1126725 Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 | || || ||||| || || || || || || | ||||| ||||| || || || | Sbjct 1126724 GTCACCGTCCCAGCCTACTTCAACGACTCCCAGAGACAAGCCACTAAGGACGCCGGTACC 1126665 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 ||||| ||||| || || || ||||| || || ||||| || || || || |||| || Sbjct 1126664 ATTGCCGGTCTAAACGTCTTGCGTATCATCAACGAACCTACTGCGGCTGCCATTGCCTAC 1126605 Query 474863 GGTCTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATT---GTGGAGGT 474919 ||| | || ||||| || || || |||||| || ||||| || | |||| ||| Sbjct 1126604 GGTTTGGACAAGAAATCCGAAGGTGAGAAAAATGTCTTGATCTTCGACTTGGGTGGTGGT 1126545 Query 474920 A 474920 | Sbjct 1126544 A 1126544 Score = 89.7 bits (98), Expect = 3e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 480594 TTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGT 480653 || || |||| | ||||||| |||||| | |||||| |||||||| || | | |||| Sbjct 71375 TTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGT 71316 Query 480654 TGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 || ||||||||||| ||||||||||| || ||||| |||||| ||||| || || Sbjct 71315 TGGTCAGGAGGAATACCTTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTC 71257 >seq6 Length=1501435 Score = 113 bits (124), Expect = 3e-19 Identities = 319/480 (66%), Gaps = 20/480 (4%) Strand=Plus/Minus Query 475700 GAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTC---A 475756 || |||||||||||||| ||||| || |||||||||||| | || || |||| | Sbjct 1088472 GACATTGTTCTTGTAGGTGGTTCTACTAGAATTCCAAAAGTTC-AGCAA--CTTTTGGAA 1088416 Query 475757 TCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCAT 475814 | | ||| || ||||| ||| | ||| | | || ||||| ||||||||||| | Sbjct 1088415 ACTTTTTTCAACGGTAAGAAGGCT--TCCAAGGGCATCAACCCTGACGAAGCTGTTGCTT 1088358 Query 475815 ATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATA 475874 ||| || ||||| ||||||| | |||| || || | || | | || || Sbjct 1088357 TTGGTGCAGCTGTTCAAGCAGGTGTTTTGTCTGGCGAGGAAGGTGCGGAAG------ATC 1088304 Query 475875 TTGTACTTGTTG-ACGT-AACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTAT 475932 | || |||| || |||| ||| || | | ||||| ||||||| || || | || Sbjct 1088303 TAGT-CTTGCTGGACGTCAACGCCT-TGACCCTAGGTATTGAAACCACAGGCGGTGTCAT 1088246 Query 475933 GACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCAC 475992 ||| | || | ||||| || ||||| || || || || | || || || Sbjct 1088245 GACCCCATTGATCAAGAGAAACACCAACATCCCCACGAAGAAGTCTCAAATCTTCTCTAC 1088186 Query 475993 TTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCAC 476052 | || || ||| |||||| | |||||| | | ||||||||||||| || | Sbjct 1088185 CGCTGTGGACAACCAACAAACTGTCATGATCCAAGTTTACGAAGGTGAAAGAACTTTGGC 1088126 Query 476053 TAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGG 476112 || || || |||| | | || || | || || |||||| ||||||||||||| Sbjct 1088125 CAAGGACAACAACAGATTGGGTCAATTCGAACTCACTGGAATTCCTTCTGCTCCCAGAGG 1088066 Query 476113 AGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGC 476172 || |||||||| || |||||||| | | | ||||| || |||||||| || ||| |||| Sbjct 1088065 TGTCCCTCAAATCGAGGTTACTTTCGGTTTGGATGCCAACGGTATTCTAAAGGTTTCTGC 1088006 >seq4 Length=1207720 Score = 107 bits (118), Expect = 1e-17 Identities = 361/555 (65%), Gaps = 8/555 (1%) Strand=Plus/Minus Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || ||||| | ||| | || || || ||| || |||| |||||||| | || | Sbjct 460765 TTCGAAGAACTGTGTGCCGACCTTTTCAGATCCACGCTTGACCCCGTTGAGAAGGTGTTG 460706 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | || || |||||||| || ||| || | || || || || || ||||| || || Sbjct 460705 CGCGACGGCAAGCTTGACAAGTCTCAAATCGACGAGATCGTGCTCGTTGGAGGCTCGACC 460646 Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGAA 475786 |||||||||||| | | || | |||| | ||||| || ||| | || | Sbjct 460645 AGAATTCCAAAAGTGCAAAAACTCGTTTCGGATTTCTTTAACGGCAAAGAACCCAAC--A 460588 Query 475787 AGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844 ||| | || || |||||||| ||||| || || || || || || || ||||| || Sbjct 460587 AGTCCATCAACCCAGATGAAGCGGTTGCGTACGGTGCCGCCGTACAGGCCGCTATCTTGA 460528 Query 475845 CAGGTCAATCAGACGA-GAA-ACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTC 475902 | ||| | ||| | ||| ||| | | | | | || | ||||| | || | || Sbjct 460527 CCGGTGAC-CAGTCCTCGAAGACTCAGGACTTGT-TGCTATTGGACGTGGCGCCTTTGTC 460470 Query 475903 ATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTAT 475962 | || | ||||||| ||||| || ||||| || | || |||||| | | || Sbjct 460469 GCTCGGAATCGAAACAGCAGGAGGAATCATGACCAAATTGATCCCCAGAAACTCGACGAT 460410 Query 475963 CCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCAT 476022 || ||| ||||| |||| || ||||| ||| | || || ||| | || || Sbjct 460409 TCCTACCAAGAAATCTGAAGTTTTCTCCACCTATGCCGACAACCAACCGGGCGTTCTAAT 460350 Query 476023 CCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAA 476082 ||| | || ||||||||||||| || || ||||| || |||||| | || | Sbjct 460349 TCAAGTGTTCGAAGGTGAAAGAACCCGAACCAAGGATAACAATTTACTTGGGAAATTCGA 460290 Query 476083 TCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATAT 476142 ||| || || || || || || ||||| || || || |||||||| ||||||||| | Sbjct 460289 GCTTTCCGGGATCCCACCGGCGCCAAGAGGTGTACCACAGATTGAAGTCACTTTTGATCT 460230 Query 476143 TGATGCAAATGGTAT 476157 ||||| || || || Sbjct 460229 CGATGCCAACGGAAT 460215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178856841184