Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5 156 2e-33 >seq5 Length=1414338 Score = 156 bits (172), Expect = 2e-33 Identities = 319/474 (67%), Gaps = 0/474 (0%) Strand=Plus/Minus Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949 ||||| | || ||| ||| || | || | ||| || | | |||||| | |||||||| Sbjct 885624 TTGGAGAAAACAAAGTCCAGTCTCCGTTCTCCTCGACCCTTTTCATAAAAAGATCTGGAA 885565 Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009 |||| | |||| || | ||| | || | ||||||||||| ||||||||||| | Sbjct 885564 TCCATAATGCAGGGAAAAGATCCCGGGCACGGATTTCTTCTTTACCGTGATTCTTCCGGA 885505 Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069 ||||| || ||||||||||| ||||||||||| || ||||| || |||||| ||| Sbjct 885504 TATCTATAAAGTCAAAAATATCGGAGTGCCATGGCTCCAAATAAATGGCAAAAGCACCAG 885445 Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129 |||||| ||||||||||| || || | ||||| | || ||||| | ||| | Sbjct 885444 GTCTTTTGTTACCACCTTGATCGACATAGCGAGCAGTGTTGTTAAAAACACGAATCATAG 885385 Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATAT 26189 ||| |||||| | || ||||| || | || | |||||| ||||| || || | Sbjct 885384 GAATCAATCCATTGGATGTACCGTTGGTACCGGCGATGTAGGATCCCGTCGACCTGATGT 885325 Query 26190 CGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTG 26249 |||| || | ||||| || || || || ||||| |||||| ||| | | Sbjct 885324 TGTGAATGTGCAATCCGATACCGCCGGCAGTCTTGGAAATCATTGCACACTCTTTCAAAG 885265 Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309 ||||| | || || | ||| ||| | ||||| | | |||||||| || || | | Sbjct 885264 TATCGTAGATACCCTCGATGGAGTCATCCTTCATGGCGACCAAAAAACAGGACGACATCT 885205 Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATC 26363 | | || | || || | || || | || || | ||||| ||| |||||| Sbjct 885204 GAGGGTGCGGCGTACCAGCGTTGAAAAGGGTTGGCGAGGCATGCGTAAAATATC 885151 Score = 100 bits (110), Expect = 1e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 25048 GTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGT 25107 ||| || ||| | || |||||||||||||| || || || ||||| ||||||||||| || Sbjct 886448 GTTAGATGTGTAAGGCTCAAAACATTCATTGTTACCCAAAATTTGCGAAGTAGATGCCGT 886389 Query 25108 TGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCT 25157 ||||||| |||| | ||||||||||| | ||||| ||| ||||||| Sbjct 886388 TGGCATTGGCGCTAGCAGGAGCGAATTTCTGATACCATCTTTGACAATCT 886339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039975328600