Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq6 134 3e-26
seq8 125 1e-23
>seq6
Length=1501435
Score = 134 bits (148), Expect = 3e-26
Identities = 169/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| ||||| || ||||| || ||||| | ||||| || || |||||
Sbjct 435035 ATACCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCC 435094
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| || |||| |||| ||||| ||||| ||||| || || ||||| ||||| || ||
Sbjct 435095 GACAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGA 435154
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| || || || || || |||||| || | || || |||||
Sbjct 435155 GGGATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCA 435214
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538
|| || |||||||| || || || || | ||||| | ||| ||||||||||
Sbjct 435215 ACCTCGAGAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCATTT 435266
Score = 122 bits (134), Expect = 2e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | ||| || ||||| || ||||| | ||||| || || |||||
Sbjct 434807 ATACCACCTCTCAAACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCC 434866
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| || |||| |||| ||||| ||||| ||||| || || ||||| ||||| || ||
Sbjct 434867 GACAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGA 434926
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||| || || || || || |||||| |||| || || |||||
Sbjct 434927 GGGATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCA 434986
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || |||||||| || || || || | || || | || ||||||||
Sbjct 434987 ACCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036
Score = 98.7 bits (108), Expect = 2e-15
Identities = 117/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| ||||| || ||||| || ||||| | ||||| || || ||||||
Sbjct 434266 ATACCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCA 434325
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| ||||||| |||| || || || || ||||||||||| | ||||| ||||| ||
Sbjct 434326 GACAATGTTCTACCATCTTCTAACTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCCGGA 434385
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTA 192465
|| || || || || || || || || || ||||||
Sbjct 434386 GGGATACCCTCCTTGTCCTGAATCTTGGACTTCACATTA 434424
>seq8
Length=1778692
Score = 125 bits (138), Expect = 1e-23
Identities = 162/224 (72%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 192304 ATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAA 192363
|| ||||||||||| | | || || || || | ||| | ||| || ||| || ||
Sbjct 71429 ATGATACCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAG 71370
Query 192364 TCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCA 192423
||||| || |||| |||| |||||||| |||||||||||||| ||||| ||||| |||
Sbjct 71369 TCAGACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 71310
Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483
|| || || ||||| || || || || || || ||||| || | || || |||
Sbjct 71309 GGAGGAATACCTTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGAT 71250
Query 192484 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527
|| ||||| | ||| ||||| |||||||| || || || | |||
Sbjct 71249 TCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 71206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479899090800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |