Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq6 134 2e-26
seq8 118 2e-21
>seq6
Length=1501435
Score = 134 bits (148), Expect = 2e-26
Identities = 169/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| || || || ||||| || ||||| | ||||| ||| || |||||
Sbjct 435035 ATACCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCC 435094
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | || ||||| ||||| ||||| ||||| ||||| |||||||| ||
Sbjct 435095 GACAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGA 435154
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || ||||| || || || || || |||||| || || || || |||||
Sbjct 435155 GGGATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCA 435214
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTT 172071
|| || |||||||| || || || || | ||||| | || ||||||||||
Sbjct 435215 ACCTCGAGAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCATTT 435266
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || ||||| || ||||| | ||||| ||| || |||||
Sbjct 434807 ATACCACCTCTCAAACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCC 434866
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| || | || | || ||||| ||||| ||||| ||||| ||||| |||||||| ||
Sbjct 434867 GACAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGA 434926
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || ||||| || || || || || |||||| ||||| || || |||||
Sbjct 434927 GGGATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCA 434986
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || |||||||| || || || || | || || | ||| ||||||||
Sbjct 434987 ACCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036
>seq8
Length=1778692
Score = 118 bits (130), Expect = 2e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || || || || || | ||| | ||| || || || ||
Sbjct 71429 ATGATACCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAG 71370
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| || |||| || | || |||||||| ||||||||||| || ||||| |||||||||
Sbjct 71369 TCAGACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 71310
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
|| || || ||||| || || || || || || ||||| || || || || |||
Sbjct 71309 GGAGGAATACCTTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGAT 71250
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054
|| ||||| | ||| ||||| |||||||| || || ||
Sbjct 71249 TCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTT 71212
Score = 102 bits (112), Expect = 1e-16
Identities = 164/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || || || || | || | || || ||| ||
Sbjct 1641529 TTCTTACCACCACCTCTCAATCTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTG 1641470
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || | | || |||||||| |||||||| || || ||||| || |||
Sbjct 1641469 TAGTCGGACAAAGTTCTTCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGG 1641410
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || ||||| || || || || || || ||||| || || || ||
Sbjct 1641409 TCAGGTGGGATACCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAA 1641350
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| || |||| || || || ||||| || | || || | || ||||||||
Sbjct 1641349 GATTCAACCTCTAAGGTGATAGTCTTACCCGTAAGGGTCTTGACAAAAATCTGCAT 1641294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135909486400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |