Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq5 159 1e-33
seq4 109 2e-18
>seq5
Length=1414338
Score = 159 bits (176), Expect = 1e-33
Identities = 350/524 (67%), Gaps = 3/524 (1%)
Strand=Plus/Minus
Query 155979 CCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATAC 156038
|||||||||||||| | |||| || || |||||| | || |||||||| |||
Sbjct 885520 CCGTGATTCTTCCGGATATCTATAAAGTCAAAAATATCGGAGTGCCATGGCTCCAAATAA 885461
Query 156039 ATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTG 156095
|| |||||| |||| || ||| ||||| ||||| ||||| |||||||| || ||
Sbjct 885460 ATGGCAAAAGCACCAGGTCTTTTGTTACCACCTTGATCGACATAGCGAGCAGTGTTGTTA 885401
Query 156096 AAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAA 156155
|| |||| | ||||||||| | |||||||| || || ||||| ||| || | ||
Sbjct 885400 AAAACACGAATCATAGGAATCAATCCATTGGATGTACCGTTGGTACCGGCGATGTAGGAT 885341
Query 156156 CCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGA 156215
|| | || | | || ||||| || | ||| ||||| || | || |||||
Sbjct 885340 CCCGTCGACCTGATGTTGTGAATGTGCAATCCGATACCGCCGGCAGTCTTGGAAATCATT 885281
Query 156216 GCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGA 156275
|| || || || | ||||| | | ||||| || || || ||||| | ||| | | | |
Sbjct 885280 GCACACTCTTTCAAAGTATCGTAGATACCCTCGATGGAGTCATCCTTCATGGCGACCAAA 885221
Query 156276 TAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGA 156335
| || || | ||||| | || || ||||||||||| || || || | |||||
Sbjct 885220 AAACAGGACGACATCTGAGGGTGCGGCGTACCAGCGTTGAAAAGGGTTGGCGAGGCATGC 885161
Query 156336 ATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCG 156395
||||||| | ||||| || ||| ||||| | | ||| |||| ||| | |||
Sbjct 885160 GTAAAATATCTGAGGGACATTAGATTGTAAGTCTCGATCACCTTTTCAATATTGGTTCCG 885101
Query 156396 TGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCA 156455
|| || | || | || | ||| | || || ||||| || | | | ||||
Sbjct 885100 TGTATGCCGACGGCAACACGCATGACAAGGTGTTGTGGACGTTCGGCGACCTGACCATTG 885041
Query 156456 ATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
|||| || ||||| | ||| ||||| || || |||||||||||
Sbjct 885040 ATTCTCAATAGGTACGAGCGCTCCAGCGTCTTGAACCCGAAATA 884997
Score = 107 bits (118), Expect = 6e-18
Identities = 125/167 (75%), Gaps = 4/167 (2%)
Strand=Plus/Minus
Query 155588 AATAGACGCCAGATTACATACCGCAGTCTC--CTTGTCGTCGCTGTATTCTACAATCTCA 155645
|||||| || |||||||| || ||||| || | || || ||| || |||||||||
Sbjct 885911 AATAGATGCAAGATTACAGACTGCAGTTTCACCAGGT--TCAGAGTACTCAACAATCTCA 885854
Query 155646 CAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAA 155705
||||||| ||| ||| |||||| ||||||||||| ||||||||||| ||||| ||
Sbjct 885853 CAGCACAAGTTGGAAGATTTGATGACACCTAAATTCTTTTGGTTAGATTTTCTGTTGCAT 885794
Query 155706 GCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTC 155752
|| || || || || ||| | || || || || || ||||||| ||
Sbjct 885793 GCGTCTTTATAAAGCATGAAAGGAGTACCAGTTTCAGTCTGTGCTTC 885747
Score = 86.0 bits (94), Expect = 2e-11
Identities = 106/142 (75%), Gaps = 5/142 (4%)
Strand=Plus/Minus
Query 301812 CAGAATTTC-TTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAG 301870
|| |||||| ||||| ||| || ||||| || || || |||||| ||||||||||
Sbjct 997103 CAAAATTTCCTTCAA-ACGAGGGACACCGGATGTGACTTT---CTTGGAGGCAACACCAG 997048
Query 301871 CAAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAA 301930
|||||||||| || |||| || | ||||| | || ||||||||| ||||| || |
Sbjct 997047 CAAAGTGGAACGTGTTCAAGGTCATCTGAGTGGCGGGTTCACCAATAGACTGTGCAGCCA 996988
Query 301931 TCATACCAACCATTTCTCCTGG 301952
| |||||||||||| || ||
Sbjct 996987 AAACACCAACCATTTCGCCGGG 996966
>seq4
Length=1207720
Score = 109 bits (120), Expect = 2e-18
Identities = 339/513 (66%), Gaps = 20/513 (4%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
||||| || | |||||||| ||||| |||||||||||||| | || |||||||| |
Sbjct 974486 GCACCATGCGCGATCATACAGTCACGTTCCATTTCACCGAATCTCAGTCCACCATCTCTG 974545
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604
| || ||| ||| | ||||| | ||| | || |||||| |||| ||
Sbjct 974546 GACCGACCTTCGACCGGCTGTCTAGTCAACACTTGCACAGGACCAC--GAGCTCTCGCGT 974603
Query 251605 TGCTT--ATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGC 251662
| || ||| | ||||| ||| | | ||| |||||| | | ||||||| || ||
Sbjct 974604 GGATTTTATCGTCGACCATGTGCCTCAAACGTTGGTAGTAGGTTGGACCGAAAAATATCT 974663
Query 251663 TCGAAGGCATTTGCTCT---CCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATT 251719
|| ||| ||| | || || || |||| ||||| ||||| |||| ||||
Sbjct 974664 GCGC---CATAAGCTTTTTACCCGTGTGACCGTTGTACATCACTTCAAATCCACGTGATT 974720
Query 251720 CATAACCAAGTT-TCT--GTAGCTCTGAAGCAATATCACCAATCTTGA-ATTTGCTAAAA 251775
|||||| | | ||| |||| | || |||| || | | | | | || || ||
Sbjct 974721 GATAACCGTGCTCTCTAAGTAG---TCGAGAAATACCATCCACCGTAATATCTGTGAATG 974777
Query 251776 CTGGTGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCCTAAAAGTGTCTCTTTC 251835
| ||| ||| || | | |||| | | |||||| | ||| | ||| |
Sbjct 974778 GCGATGC-GTCACCCTCATTACCCGATAGGGCTGCCACTTTACTTAACAAACACTCGATA 974836
Query 251836 AGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTC 251895
|| || |||| |||||||||| ||||| ||||||||||| || || | ||| |||
Sbjct 974837 AGATGTGCGACAGTCATACGAGATGGAATGGCATGGGGATTAATTATCAGGTCTGGTACA 974896
Query 251896 AGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTT 251954
| || || |||||||| ||||| | ||| || | |||| | | ||||| || || ||
Sbjct 974897 ACGCCTTCTGCAGTGAAAGGCATGT-CTTCTCTCCTATAAGTAATACCAATTGTACCTTT 974955
Query 251955 TTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987
||||||||||||||| || |||||||||||
Sbjct 974956 TTGTCCGTGACGAGACGCAAATTTATCACCAAT 974988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817449138696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |