Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq5 159 1e-33 seq4 109 2e-18 >seq5 Length=1414338 Score = 159 bits (176), Expect = 1e-33 Identities = 350/524 (67%), Gaps = 3/524 (1%) Strand=Plus/Minus Query 155979 CCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATAC 156038 |||||||||||||| | |||| || || |||||| | || |||||||| ||| Sbjct 885520 CCGTGATTCTTCCGGATATCTATAAAGTCAAAAATATCGGAGTGCCATGGCTCCAAATAA 885461 Query 156039 ATAGCAAAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTG 156095 || |||||| |||| || ||| ||||| ||||| ||||| |||||||| || || Sbjct 885460 ATGGCAAAAGCACCAGGTCTTTTGTTACCACCTTGATCGACATAGCGAGCAGTGTTGTTA 885401 Query 156096 AAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAA 156155 || |||| | ||||||||| | |||||||| || || ||||| ||| || | || Sbjct 885400 AAAACACGAATCATAGGAATCAATCCATTGGATGTACCGTTGGTACCGGCGATGTAGGAT 885341 Query 156156 CCAGATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGA 156215 || | || | | || ||||| || | ||| ||||| || | || ||||| Sbjct 885340 CCCGTCGACCTGATGTTGTGAATGTGCAATCCGATACCGCCGGCAGTCTTGGAAATCATT 885281 Query 156216 GCGCATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGA 156275 || || || || | ||||| | | ||||| || || || ||||| | ||| | | | | Sbjct 885280 GCACACTCTTTCAAAGTATCGTAGATACCCTCGATGGAGTCATCCTTCATGGCGACCAAA 885221 Query 156276 TAGCACGAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGA 156335 | || || | ||||| | || || ||||||||||| || || || | ||||| Sbjct 885220 AAACAGGACGACATCTGAGGGTGCGGCGTACCAGCGTTGAAAAGGGTTGGCGAGGCATGC 885161 Query 156336 ATAAAATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCG 156395 ||||||| | ||||| || ||| ||||| | | ||| |||| ||| | ||| Sbjct 885160 GTAAAATATCTGAGGGACATTAGATTGTAAGTCTCGATCACCTTTTCAATATTGGTTCCG 885101 Query 156396 TGAATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCA 156455 || || | || | || | ||| | || || ||||| || | | | |||| Sbjct 885100 TGTATGCCGACGGCAACACGCATGACAAGGTGTTGTGGACGTTCGGCGACCTGACCATTG 885041 Query 156456 ATTCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 |||| || ||||| | ||| ||||| || || ||||||||||| Sbjct 885040 ATTCTCAATAGGTACGAGCGCTCCAGCGTCTTGAACCCGAAATA 884997 Score = 107 bits (118), Expect = 6e-18 Identities = 125/167 (75%), Gaps = 4/167 (2%) Strand=Plus/Minus Query 155588 AATAGACGCCAGATTACATACCGCAGTCTC--CTTGTCGTCGCTGTATTCTACAATCTCA 155645 |||||| || |||||||| || ||||| || | || || ||| || ||||||||| Sbjct 885911 AATAGATGCAAGATTACAGACTGCAGTTTCACCAGGT--TCAGAGTACTCAACAATCTCA 885854 Query 155646 CAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAA 155705 ||||||| ||| ||| |||||| ||||||||||| ||||||||||| ||||| || Sbjct 885853 CAGCACAAGTTGGAAGATTTGATGACACCTAAATTCTTTTGGTTAGATTTTCTGTTGCAT 885794 Query 155706 GCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTC 155752 || || || || || ||| | || || || || || ||||||| || Sbjct 885793 GCGTCTTTATAAAGCATGAAAGGAGTACCAGTTTCAGTCTGTGCTTC 885747 Score = 86.0 bits (94), Expect = 2e-11 Identities = 106/142 (75%), Gaps = 5/142 (4%) Strand=Plus/Minus Query 301812 CAGAATTTC-TTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAG 301870 || |||||| ||||| ||| || ||||| || || || |||||| |||||||||| Sbjct 997103 CAAAATTTCCTTCAA-ACGAGGGACACCGGATGTGACTTT---CTTGGAGGCAACACCAG 997048 Query 301871 CAAAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAA 301930 |||||||||| || |||| || | ||||| | || ||||||||| ||||| || | Sbjct 997047 CAAAGTGGAACGTGTTCAAGGTCATCTGAGTGGCGGGTTCACCAATAGACTGTGCAGCCA 996988 Query 301931 TCATACCAACCATTTCTCCTGG 301952 | |||||||||||| || || Sbjct 996987 AAACACCAACCATTTCGCCGGG 996966 >seq4 Length=1207720 Score = 109 bits (120), Expect = 2e-18 Identities = 339/513 (66%), Gaps = 20/513 (4%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 ||||| || | |||||||| ||||| |||||||||||||| | || |||||||| | Sbjct 974486 GCACCATGCGCGATCATACAGTCACGTTCCATTTCACCGAATCTCAGTCCACCATCTCTG 974545 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 | || ||| ||| | ||||| | ||| | || |||||| |||| || Sbjct 974546 GACCGACCTTCGACCGGCTGTCTAGTCAACACTTGCACAGGACCAC--GAGCTCTCGCGT 974603 Query 251605 TGCTT--ATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATGC 251662 | || ||| | ||||| ||| | | ||| |||||| | | ||||||| || || Sbjct 974604 GGATTTTATCGTCGACCATGTGCCTCAAACGTTGGTAGTAGGTTGGACCGAAAAATATCT 974663 Query 251663 TCGAAGGCATTTGCTCT---CCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATT 251719 || ||| ||| | || || || |||| ||||| ||||| |||| |||| Sbjct 974664 GCGC---CATAAGCTTTTTACCCGTGTGACCGTTGTACATCACTTCAAATCCACGTGATT 974720 Query 251720 CATAACCAAGTT-TCT--GTAGCTCTGAAGCAATATCACCAATCTTGA-ATTTGCTAAAA 251775 |||||| | | ||| |||| | || |||| || | | | | | || || || Sbjct 974721 GATAACCGTGCTCTCTAAGTAG---TCGAGAAATACCATCCACCGTAATATCTGTGAATG 974777 Query 251776 CTGGTGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCCTAAAAGTGTCTCTTTC 251835 | ||| ||| || | | |||| | | |||||| | ||| | ||| | Sbjct 974778 GCGATGC-GTCACCCTCATTACCCGATAGGGCTGCCACTTTACTTAACAAACACTCGATA 974836 Query 251836 AGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTC 251895 || || |||| |||||||||| ||||| ||||||||||| || || | ||| ||| Sbjct 974837 AGATGTGCGACAGTCATACGAGATGGAATGGCATGGGGATTAATTATCAGGTCTGGTACA 974896 Query 251896 AGTCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTT 251954 | || || |||||||| ||||| | ||| || | |||| | | ||||| || || || Sbjct 974897 ACGCCTTCTGCAGTGAAAGGCATGT-CTTCTCTCCTATAAGTAATACCAATTGTACCTTT 974955 Query 251955 TTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||||||||||| || ||||||||||| Sbjct 974956 TTGTCCGTGACGAGACGCAAATTTATCACCAAT 974988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817449138696