Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq6 143 2e-29 seq8 129 5e-25 >seq6 Length=1501435 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || || || || ||||| ||||| || ||| | || Sbjct 434267 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434208 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || |||||||| || || ||||| || ||| Sbjct 434207 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434148 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||| || || || |||||| |||| ||| |||| | |||| ||||| ||| Sbjct 434147 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434088 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| || || ||||| || ||||| ||| | ||||| Sbjct 434087 ATTCAAAAAGAATCAACTCTGCACTTAGTCTTGCGTTTGAGAGGAGG 434041 Score = 140 bits (154), Expect = 3e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || || || || || ||||| ||||| || ||| || | Sbjct 435264 ATGCAGATTTTTGTCAAAACCCTTACGGGAAAGACGATTACTCTCGAGGTTGAATCCTCT 435205 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || |||||||| || || ||||| || ||| Sbjct 435204 GACACCATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 435145 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||| || || || |||||| |||| ||| |||| | |||| ||||| ||| Sbjct 435144 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 435085 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||| ||||| || | ||||| || ||||| Sbjct 435084 ATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCG 435050 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || || || || || || ||||| ||||| || ||| | || Sbjct 435036 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434977 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || |||||||| || || ||||| || ||| Sbjct 434976 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434917 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||| || || || |||||| |||| ||| |||| | |||| ||||| ||| Sbjct 434916 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434857 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| || | ||||| || ||||| ||| | || || Sbjct 434856 ATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTTTGAGAGGTGG 434810 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 ||||| || ||||| || || || ||||| ||||| || | | |||||||| || || Sbjct 434411 AAGATTCAGGACAAGGAGGGTATCCCTCCGGATCAGCAGAGGCTTATCTTTGCTGGCAAG 434352 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||| | || ||| |||| |||| ||||| ||||||||||| ||||| || | ||| Sbjct 434351 CAGTTAGAAGATGGTAGAACATTGTCTGATTACAACATTCAAAAAGAATCAACTTTGCAC 434292 Query 24908 TTGGTGTTGCG 24918 || || ||||| Sbjct 434291 TTAGTCTTGCG 434281 >seq8 Length=1778692 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| ||| | || || || || ||||| ||||| || | || || ||| | | Sbjct 1641293 GATGCAGATTTTTGTCAAGACCCTTACGGGTAAGACTATCACCTTAGAGGTTGAATCTTC 1641352 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||||||| ||||| ||||| || || || || || Sbjct 1641353 TGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATCCCACCTGACCA 1641412 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| | |||||||| || || || || |||| ||| |||| |||| || || || Sbjct 1641413 GCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGTCCGACTACAA 1641472 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 ||||||||||||||| || || |||||||| ||| ||||| | || || || Sbjct 1641473 CATTCAAAAGGAATCCACCCTGCACTTGGTCTTGAGATTGAGAGGTGGTGG 1641523 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787 || ||||| || || || | ||||| ||| | ||||||| | || | || || Sbjct 71221 ACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATTGACAATGTCAAGTCG 71280 Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 |||||||| ||||| ||||| || ||||| || |||||| | ||||||||||| || || Sbjct 71281 AAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTGATCTTTGCTGGTAAG 71340 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 || |||| ||| |||| |||| || || ||||| |||||||| || || || ||| Sbjct 71341 CAATTGGAAGATGGCAGAACTTTGTCTGACTACAACATCCAAAAGGAGTCCACTCTTCAC 71400 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||| ||||| | || || Sbjct 71401 TTGGTCTTGAGATTGAGAGGTGG 71423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897555010240