Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq5 134 2e-25
seq2 125 1e-22
seq8 104 4e-16
>seq5
Length=1414338
Score = 134 bits (148), Expect = 2e-25
Identities = 185/259 (71%), Gaps = 0/259 (0%)
Strand=Plus/Minus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
|| ||||||||||| || |||| |||||| || || | ||| || | | || |||||
Sbjct 885427 TGATCGACATAGCGAGCAGTGTTGTTAAAAACACGAATCATAGGAATCAATCCATTGGAT 885368
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660
|||||||| || || | ||||| |||| | | | ||||| | || |||
Sbjct 885367 GTACCGTTGGTACCGGCGATGTAGGATCCCGTCGACCTGATGTTGTGAATGTGCAATCCG 885308
Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720
|| |||||||| | |||||| || | || |||| ||||| || |||||||| ||||||
Sbjct 885307 ATACCGCCGGCAGTCTTGGAAATCATTGCACACTCTTTCAAAGTATCGTAGATACCCTCG 885248
Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780
|| ||||| |||||||| | | || ||| || ||||| | || ||| ||| ||| ||
Sbjct 885247 ATGGAGTCATCCTTCATGGCGACCAAAAAACAGGACGACATCTGAGGGTGCGGCGTACCA 885188
Query 2073781 GCATTGAAGAGCGTGGGCG 2073799
|| ||||| || || ||||
Sbjct 885187 GCGTTGAAAAGGGTTGGCG 885169
>seq2
Length=809466
Score = 125 bits (138), Expect = 1e-22
Identities = 184/258 (71%), Gaps = 2/258 (1%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||| || || | || ||||| || ||||| ||| |||| ||||||||| |||
Sbjct 459896 GTACTTGGTCACCGCTCTCGTTCCCTCAGAAACGGCATGCTTGGCAAGTTCGCCGGGCAA 459837
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
|||||| | |||||| ||||||||||| || | || || |||||| || |
Sbjct 459836 GATCAGTCTCACGGCAGTCTGGATCTCACGCGCAGAAATAGTAGACTTCTTGTT-GTAAG 459778
Query 1485591 CGCCAGGCGGC-CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649
|| | || | || || || |||| || |||| ||||| || |||||||||||||
Sbjct 459777 CGGCGAGCTTCGACGCTTCCGTCGCGATCCGCTCGAAAATGTCATTCACAAACGAGTTCA 459718
Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709
|||||||||||||| | || || ||| ||| |||||| || || | ||| ||||
Sbjct 459717 AAATCGACATCGATTTCTGAGAAATACCCGTGTCTGGGTGCGTTTGTTTCAACACTTTGT 459658
Query 1485710 AAACAAAGGACGAGTACG 1485727
| | | ||||| ||||
Sbjct 459657 AGATGTAAGACGAATACG 459640
>seq8
Length=1778692
Score = 104 bits (114), Expect = 4e-16
Identities = 155/219 (71%), Gaps = 6/219 (3%)
Strand=Plus/Minus
Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984
||||||||||||||||||||| | || ||||| ||||| | ||| || ||||
Sbjct 705939 CTCGAAAAAGTTGGTCTTGCCGGCAAGAGAGATGTTTTCCATAAAGTCGAAAGGATTGG- 705881
Query 793985 CGTCAGGTAGTG---CTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTC 794041
||| || | ||| | || ||||||| | | |||| | ||| ||||| |||||
Sbjct 705880 --TCACGTTGAAAACCTTTTGGCTTCCGAGCGCCACGAGCAATCTGTCAGCGACAAATTC 705823
Query 794042 AATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCT 794101
| |||||| ||||||| | |||||||| |||| | || || ||||||| ||| |
Sbjct 705822 CACATACTGGTTCATGAGGTCTGCGTTCATACCGAGTAACGAGACCGGCAGCGCGTCGAT 705763
Query 794102 GACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140
|| | ||| ||||||||||| ||||| |||||||
Sbjct 705762 GAAGTATCTTTTTTCGATCTCGACAGCCTCCGTGATGAT 705724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916245549003512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |