Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq5 134 2e-25 seq2 125 1e-22 seq8 104 4e-16 >seq5 Length=1414338 Score = 134 bits (148), Expect = 2e-25 Identities = 185/259 (71%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600 || ||||||||||| || |||| |||||| || || | ||| || | | || ||||| Sbjct 885427 TGATCGACATAGCGAGCAGTGTTGTTAAAAACACGAATCATAGGAATCAATCCATTGGAT 885368 Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660 |||||||| || || | ||||| |||| | | | ||||| | || ||| Sbjct 885367 GTACCGTTGGTACCGGCGATGTAGGATCCCGTCGACCTGATGTTGTGAATGTGCAATCCG 885308 Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720 || |||||||| | |||||| || | || |||| ||||| || |||||||| |||||| Sbjct 885307 ATACCGCCGGCAGTCTTGGAAATCATTGCACACTCTTTCAAAGTATCGTAGATACCCTCG 885248 Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780 || ||||| |||||||| | | || ||| || ||||| | || ||| ||| ||| || Sbjct 885247 ATGGAGTCATCCTTCATGGCGACCAAAAAACAGGACGACATCTGAGGGTGCGGCGTACCA 885188 Query 2073781 GCATTGAAGAGCGTGGGCG 2073799 || ||||| || || |||| Sbjct 885187 GCGTTGAAAAGGGTTGGCG 885169 >seq2 Length=809466 Score = 125 bits (138), Expect = 1e-22 Identities = 184/258 (71%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| || || | || ||||| || ||||| ||| |||| ||||||||| ||| Sbjct 459896 GTACTTGGTCACCGCTCTCGTTCCCTCAGAAACGGCATGCTTGGCAAGTTCGCCGGGCAA 459837 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 |||||| | |||||| ||||||||||| || | || || |||||| || | Sbjct 459836 GATCAGTCTCACGGCAGTCTGGATCTCACGCGCAGAAATAGTAGACTTCTTGTT-GTAAG 459778 Query 1485591 CGCCAGGCGGC-CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 || | || | || || || |||| || |||| ||||| || ||||||||||||| Sbjct 459777 CGGCGAGCTTCGACGCTTCCGTCGCGATCCGCTCGAAAATGTCATTCACAAACGAGTTCA 459718 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||||||||||||| | || || ||| ||| |||||| || || | ||| |||| Sbjct 459717 AAATCGACATCGATTTCTGAGAAATACCCGTGTCTGGGTGCGTTTGTTTCAACACTTTGT 459658 Query 1485710 AAACAAAGGACGAGTACG 1485727 | | | ||||| |||| Sbjct 459657 AGATGTAAGACGAATACG 459640 >seq8 Length=1778692 Score = 104 bits (114), Expect = 4e-16 Identities = 155/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984 ||||||||||||||||||||| | || ||||| ||||| | ||| || |||| Sbjct 705939 CTCGAAAAAGTTGGTCTTGCCGGCAAGAGAGATGTTTTCCATAAAGTCGAAAGGATTGG- 705881 Query 793985 CGTCAGGTAGTG---CTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTC 794041 ||| || | ||| | || ||||||| | | |||| | ||| ||||| ||||| Sbjct 705880 --TCACGTTGAAAACCTTTTGGCTTCCGAGCGCCACGAGCAATCTGTCAGCGACAAATTC 705823 Query 794042 AATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCT 794101 | |||||| ||||||| | |||||||| |||| | || || ||||||| ||| | Sbjct 705822 CACATACTGGTTCATGAGGTCTGCGTTCATACCGAGTAACGAGACCGGCAGCGCGTCGAT 705763 Query 794102 GACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140 || | ||| ||||||||||| ||||| ||||||| Sbjct 705762 GAAGTATCTTTTTTCGATCTCGACAGCCTCCGTGATGAT 705724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916245549003512