Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq6 152 4e-32
seq8 116 3e-21
>seq6
Length=1501435
Score = 152 bits (168), Expect = 4e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| |||||||||| || || || || || ||||||||||||||||| |||||||
Sbjct 434041 CCTCCTCTCAAACGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434100
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | ||| || | ||||||||||| | ||||||||||| || || || ||
Sbjct 434101 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 434160
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||||||||| || ||| || | || ||| | || | |||||| ||| ||| ||
Sbjct 434161 ATACCCTCTTTGTCCTG-AATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAAC 434219
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || || || || || | ||| || || || ||||||||
Sbjct 434220 CTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267
Score = 147 bits (162), Expect = 2e-30
Identities = 172/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || |||| ||||| || || || | || ||||||||||||||||| |||||||
Sbjct 435038 CCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 435097
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | ||| || | ||||||||||| | ||||||||||| || || || ||
Sbjct 435098 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 435157
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||||||||| || ||| || | || ||| | || | |||||||| ||| ||
Sbjct 435158 ATACCCTCTTTGTCCTG-AATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAAC 435216
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTT 29788
|| ||||| || || || || || | |||||| ||||| ||||||||||
Sbjct 435217 CTCGAGAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCATTT 435266
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || |||||||||| || || || | || ||||||||||||||||| |||||||
Sbjct 434810 CCACCTCTCAAACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434869
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | ||| || | ||||||||||| | ||||||||||| || || || ||
Sbjct 434870 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 434929
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|||||||||||||| || ||| || | || ||| | || | |||||| ||| ||| ||
Sbjct 434930 ATACCCTCTTTGTCCTG-AATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAAC 434988
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || || || || || | ||| || || || ||||||||
Sbjct 434989 CTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036
Score = 89.7 bits (98), Expect = 4e-13
Identities = 104/138 (75%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-C 29618
|| || |||| ||||| || || || | || ||||||||||||||||| ||||| | |
Sbjct 434269 CCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCAGAC 434328
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
||| || | | ||| || | || ||||||||| | || | || ||||||||||| ||
Sbjct 434329 AAT-GTTCTACCATCTTCTAACTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCCGGAGG 434387
Query 29679 AATACCCTCTTTGTCTTG 29696
|||||||| ||||| ||
Sbjct 434388 GATACCCTCCTTGTCCTG 434405
>seq8
Length=1778692
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| || || |||||||| ||||||||||| || || |
Sbjct 1641520 CCACCTCTCAATCTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGAC 1641461
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || | ||| || ||||| | |||||||||||||| || || ||
Sbjct 1641460 AAAGTTCTTCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGG 1641401
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || ||||| || | || |||||| | || | ||||||||| ||| ||
Sbjct 1641400 ATACCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAAGATTCAACC 1641341
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| | || ||||| || || || | ||| || ||||| ||||||||
Sbjct 1641340 TCTAAGGTGATAGTCTTACCCGTAAGGGTCTTGACAAAAATCTGCAT 1641294
Score = 114 bits (126), Expect = 1e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || ||||| ||||| ||||| || ||||| ||||| || || |
Sbjct 71423 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 71364
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || | ||| || |||||| | ||||||||||| || || || |||
Sbjct 71363 AAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGA 71304
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || ||||| || | || |||||| | || | ||||| ||| ||| |||
Sbjct 71303 ATACCTTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGACT 71244
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
|| | ||| || || || ||||| ||||| || |||||
Sbjct 71243 TCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 71206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385219162441128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |