Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq8 354 6e-92 seq4 165 6e-35 seq6 145 6e-29 seq5 87.8 1e-11 >seq8 Length=1778692 Score = 354 bits (392), Expect = 6e-92 Identities = 937/1416 (66%), Gaps = 26/1416 (2%) Strand=Plus/Plus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 || ||| | |||| || || | |||||| ||||| || | ||| || |||||||| ||| Sbjct 1125676 TTTTCAACCGCAGAGACGTTCAAAATACCGTTGGCGTCAACATCGAAAGTGACTTCGATT 1125735 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 || ||||| ||||| ||||||||||||| || ||| | ||| | |||| || Sbjct 1125736 TGTGGGACACCTCTTGGAGCAGGTGGGATACCGCTCAAGTCAAACTTACCCAACAAGTTG 1125795 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 || || ||||| || |||||| || || | ||| || || | | ||| || Sbjct 1125796 TTGTCCTTAGTCTTAGCTCTTTCACCTTCAAACACTTGAATCAACACACCTGGTTGGTTG 1125855 Query 281597 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATA 281656 || | ||||| | || ||| || || || ||||| || | |||||| ||| Sbjct 1125856 TCGGCGTAAGTGGAGAAAACTTCAGACTTCTTGGTTGGAATAGTAGAGTTTCTTGGAATC 1125915 Query 281657 ATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACAT-CAAC 281715 | |||||||| | ||||||||| ||||| | ||||||||| ||||||| ||||| |||| Sbjct 1125916 AACTTGGTCATGACACCACCAGCGGTTTCAATACCAAGAGATAGAGGAGCGACATCCAAC 1125975 Query 281716 TAGGACAATATTTTGAAGTTTTTCATCAGT-TTGACCA-ACAAGAATAGCTGCTTGAATA 281773 | |||| | ||| ||| || | | | | |||| |||| || || ||||||| Sbjct 1125976 AACAACAA-GTCTTG-AGTCTTCGAAGATTCGTCACCAGTCAAG-ATGGCGGCTTGAACG 1126032 Query 281774 GCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTG 281833 |||||||| || ||||||||||||||||| || | | | || ||| ||||| ||| Sbjct 1126033 GCAGCACCGTAAGCAACAGCTTCATCAGGGTTGATGGATCTGTTGGGTTCCTTACCGTTG 1126092 Query 281834 AAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACA 281893 || | | || | ||| | | ||||| ||||| | | || || ||||| | || Sbjct 1126093 AAGTAGTCAGAGACAAGCTTTTGAACCTTTGGAATTCTGGTAGAACCACCAACAAGAACG 1126152 Query 281894 ATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCA 281953 ||||| || || || || |||| ||| | || || || || ||||| || || Sbjct 1126153 ATTTCGTGAACGGCAGACTTGTCCAATTTAGCGTCTCTCAAGACCTTCTCAACAGGGTCC 1126212 Query 281954 AGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACA 282013 | | | ||| |||||||| | ||| | |||||| ||| | ||||| || | || | Sbjct 1126213 AAAGTGGATCTGAACAAGTCAGCACACAATTCTTCAAATCTGGCTCTGGTGATAGAGGTG 1126272 Query 282014 TTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT 282073 | | || || |||||||||||||| || | ||||| | ||||||| ||||| || Sbjct 1126273 TAAAGGTCGATACCTTCGAACAAAGAGTCGATCTCAATGGAGGTTTGAGCAGAAGAGGAC 1126332 Query 282074 AGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGG--CTTTTGCTGATT 282131 | | | || || | |||||||| || || | ||||| || | |||| | || | Sbjct 1126333 AAAGTTCTCTTGGCTCTCTCACATGCAGTTCTCAATCTTCTCAAAGATCTTTGGTTGGTG 1126392 Query 282132 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGAT 282191 | |||| || | || | ||||||||||| |||| || | | || | | | Sbjct 1126393 G--TCAAGTCCTTCTTGTTCTTTCTCTTGAATTCTTGGACGAAGTGGTTGACCAATCTGT 1126450 Query 282192 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251 | || ||||||||||| ||||| | ||| | || | ||||| | |||| ||||| | Sbjct 1126451 TGTCGAAATCTTCACCACCCAAATGAGTGTCACCAGCGGTAGCCTTGACTTCGAAAATAC 1126510 Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311 | ||||| | ||||| || | ||||| || |||||||||| || || || | | Sbjct 1126511 CGTCTTCGATAGACAGTAGGGAGACATCGAACGTACCACCACCCAAGTCGAAGATCAAGA 1126570 Query 282312 CATTCATTTCTTTGTCTTGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 282369 |||| ||||| | || || || || | ||| || |||| ||||| ||||| || Sbjct 1126571 CATT--TTTCTCACCTTCGGATTTCTTGTCCAAACCGTAGGCAATGGCAGCCGCAGTAGG 1126628 Query 282370 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 282429 ||| || || || | ||| || || ||||| ||||| | || || || ||||||||||| Sbjct 1126629 TTCGTTGATGATACGCAAGACGTTTAGACCGGCAATGGTACCGGCGTCCTTAGTGGCTTG 1126688 Query 282430 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCC 282489 ||| || || ||||| || || || || || || | || || || | || || | Sbjct 1126689 TCTCTGGGAGTCGTTGAAGTAGGCTGGGACGGTGACGACAGCGTCGTTGAC----CTTGC 1126744 Query 282490 AATATAAGCGCTT----GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 282545 || ||| || || || | ||||| |||| |||||||| || || | || | Sbjct 1126745 AACCCAAGTAGTTTTCAGCGGTCTCCTTCATCTTACCCAAAATCATAGAGGAGACTTCCT 1126804 Query 282546 CTGGA--GAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACC 282603 | ||| ||| | | |||| ||| | ||| || | | | || ||| ||| Sbjct 1126805 CAGGAGTGAAGACT--TTGGTCTCACCCTTGTATTCGACCTGGATTTGAGGCTTACCACC 1126862 Query 282604 AACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAA 282663 || | | ||| || ||||| | | || || || ||| || ||| | || Sbjct 1126863 GACGTCGACAACCTTGAATGGGAAGTGCTTGATGTCACCTTGGACTTCAGCGTCGGTGAA 1126922 Query 282664 ATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTG 282723 | |||||| || || || || || || |||| || |||| ||| || | |||||||| Sbjct 1126923 GTTTCTACCTATCAAACGCTTGGCGTCGAAAACGGTGTTGGCTGGGTTCATGGCAGCTTG 1126982 Query 282724 ATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGT 282783 | ||||| ||||| || |||| ||| || || || || | ||| | |||||||| Sbjct 1126983 GTTCTTGGCAGCATCACCGATCAATCTTTCGGTGTCGGTGAAGGCAACGAAAGATGGAGT 1127042 Query 282784 TGTGCGATTACCTTGATCATTCGCAATAATTTCAAC 282819 || | |||||||| || || || | ||||| || Sbjct 1127043 GGTTCTGTTACCTTGGTCGTTAGCCAAGATTTCCAC 1127078 >seq4 Length=1207720 Score = 165 bits (182), Expect = 6e-35 Identities = 683/1066 (64%), Gaps = 16/1066 (2%) Strand=Plus/Plus Query 281417 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 281476 || ||| ||||| ||| || | || || |||||||| | |||||| ||||||||||| Sbjct 460191 TTTTCAATGGCAGACACGTTCAAGATTCCGTTGGCATCGAGATCAAAAGTGACTTCAATC 460250 Query 281477 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTA 281536 || || || ||||| | || ||||||||||| | | ||| | || || ||| Sbjct 460251 TGTGGTACACCTCTTGGCGCCGGTGGGATCCCGGAAAGCTCGAATTTCCCAAGTAAATTG 460310 Query 281537 TTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTA 281596 ||||| || || ||| |||||| ||||| | ||| || ||| | | ||| || Sbjct 460311 TTATCCTTGGTTCGGGTTCTTTCACCTTCGAACACTTGAATTAGAACGCCCGGTTGGTTG 460370 Query 281597 TCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCT----ATC 281652 || | ||| || | || ||| ||||| || |||||| || | |||||| ||| Sbjct 460371 TCGGCATAGGTGGAGAAAACTTCAGATTTCTTGGTAGGAATCGTCGAGTTTCTGGGGATC 460430 Query 281653 AATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATC 281712 ||| |||||||| || || || |||||||| | || || || | ||| | || || Sbjct 460431 AAT----TTGGTCATGATTCCTCCTGCTGTTTCGATTCCGAGCGACAAAGGCGCCACGTC 460486 Query 281713 AACTAGGACAATATTTTGAAGTTTTTCATCAGT-TTGACC-AACAAGAATAGCTGCTTGA 281770 | ||| | | | || ||| || | | | | ||| |||| ||||| || || Sbjct 460487 CAATAGCAACAAGTCCTG-AGTCTTCGAGGACTGGTCACCGGTCAAG-ATAGCGGCCTGT 460544 Query 281771 ATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCA 281830 | || ||||| || ||||| |||||||| || || | | | || ||| ||| || Sbjct 460545 ACGGCGGCACCGTACGCAACCGCTTCATCTGGGTTGATGGACTTGTTGGGTTCTTTGCCG 460604 Query 281831 TTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAAT 281890 || || |||| |||| |||| | || || ||||| | | || |||||||| | Sbjct 460605 TTAAAGAAATCCGAAACGAGTTTTTGCACTTTTGGAATTCTGGTCGAGCCTCCAACGAGC 460664 Query 281891 ACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGT 281950 || || || | | || || || || || || || || || || |||||||| Sbjct 460665 ACGATCTCGTCGATTTGAGACTTGTCAAGCTTGCCGTCGCGCAACACCTTCTCAACGGGG 460724 Query 281951 TCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTG 282010 ||||| | ||| || | ||| | ||| ||||||||||| | || | || || | | Sbjct 460725 TCAAGCGTGGATCTGAAAAGGTCGGCACACAGTTCTTCGAACCTGGCACGCGTGAGCGAG 460784 Query 282011 ACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAA 282070 | |||| | |||||||| | || || | ||||| | || || | || || Sbjct 460785 GTGTAGAAATCGACACCTTCGAAGAGCGAGTCGATCTCAATGGAGGTCTGCGCGGACGAC 460844 Query 282071 GATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAA-GGCTTTTGCTGA 282129 || || || || ||||| || || || || | | | || || | | || | | Sbjct 460845 GACAGAGCGCGCTTAGCGCGCTCGGCGGCGGTACGCAACCGACGCAACGACCGCTGGTTA 460904 Query 282130 TTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAAC-ACACCATGTTACAAGAC 282188 | | | ||| | | || | |||||| || || | | | | | || || | Sbjct 460905 CCG-GTGAGATCCTTGCGGTTCTTACGCTTGAACTCGTCGGCGAGATGGT-TGACGAGCC 460962 Query 282189 GATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAA 282248 | || ||||| || ||||| |||| | || ||||| | || || | || | || | Sbjct 460963 GGTTGTCAAAGTCCTCACCCCCCAGATGGGTGTTTCCGGCAGTGGCCTTGACCTCAAAGA 461022 Query 282249 GTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAA 282308 || || || | ||||| || | ||| ||| || ||||| |||| ||||| |||| Sbjct 461023 TACCTTCGTCGATGGACAACAGGGAAACGTCAAAAGTACCACCTCCCAAGTCAAAGATAA 461082 Query 282309 GTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTG 282368 | || || || || | ||||| || || || ||||| | ||||| ||||| | Sbjct 461083 GCACGTTGTGCTCGGTGGCGCCTTTTTTGTCGAGCCCGTACGCGATGGCAGCGGCAGTGG 461142 Query 282369 GTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTT 282428 | || || || || | | || || || || ||||| | ||||||||||| || || | Sbjct 461143 GCTCGTTGATGATCCGGAGCACGTTGAGCCCGGCAATGGTGCCTGCATCTTTGGTCGCCT 461202 Query 282429 GTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATC 282474 | | ||| || ||||| || || || || || || | ||||| || Sbjct 461203 GCCGTTGCGAGTCGTTGAAGTACGCGGGCACCGTGACCACGGCGTC 461248 >seq6 Length=1501435 Score = 145 bits (160), Expect = 6e-29 Identities = 249/361 (69%), Gaps = 3/361 (1%) Strand=Plus/Plus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || |||||||||||||| ||||| | || | || | |||||| |||| ||| | Sbjct 1088765 TTGTCAAAATCTTCACCACCCAAATGGGTGTCACCGGCGGTAGCTTGCACTTCGAACACA 1088824 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 || | || | ||||| |||| || || ||| |||||||||| || | | | Sbjct 1088825 CCGTTCTCGATAGACAGCAGAGAGACGTCGAAGGTACCACCACCCAGGTCGTATACGATG 1088884 Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 | || | | ||||| | || || | ||| ||||||| |||||| ||||| ||| Sbjct 1088885 A---TCTGGTGCTCGTCTTCCGTCTTGTCCAAACCGTACGCAATAGCAGCGGCAGTAGGT 1088941 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 || || | ||||||||||| || || || || || | || |||||||| || |||||| Sbjct 1088942 TCGTTCACAATTCTCAAAATGTTGAGCCCCGCGATGGTACCGGCATCTTTGGTAGCTTGT 1089001 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCA 282490 ||||| | || || || || ||||| ||||| | ||||| | || |||| ||| || Sbjct 1089002 CTTTGCGCGTCATTGAAGTACGCAGGCACAGTGACCACGGCGTGAGTAACTTTTTTGCCC 1089061 Query 282491 ATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGA 282550 | |||| | || |||| |||||||||| |||||||| | || | || ||| ||| Sbjct 1089062 AAATAATCTTCAGCGATTTGCTTCATTTTACCCAAAATCATCGCAGAGACTTCTTCGGGA 1089121 Query 282551 G 282551 | Sbjct 1089122 G 1089122 Score = 111 bits (122), Expect = 1e-18 Identities = 223/331 (67%), Gaps = 0/331 (0%) Strand=Plus/Plus Query 400262 ATGCTCACAAAGCAGGAACCAAAGAAGGATATAAATGTACCCTAATTTTGACAGAGGGAG 400321 |||| ||| || ||||| ||| | || |||| || ||||| | ||||||||||| Sbjct 872586 ATGCAAACATGGCTGGAACTAAAAACGGTCATAAGTGCACCCTCGTATTGACAGAGGGGT 872645 Query 400322 ATTCAGCTAAAACATTCGCTATGTCTGGCCTTAATGTTATTGGAAGAGATTATTATGGAG 400381 ||||| | || || | | || ||| ||| | || | |||||||||||| Sbjct 872646 TGTCAGCCCTGTCGTTAGCGGTTGCAGGACTTGCGGTTGTCGGGCGGGATTATTATGGAT 872705 Query 400382 TTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTAGTCCTaaaaaaaTTGCCG 400441 || ||| | ||||| ||| | || || ||| | || || ||| || | || || | Sbjct 872706 GTTATCCATTAAGAGGTAAAATGTTAAACGTTCGTGAAGCAAGTTCTGAGCAAGTTACGA 872765 Query 400442 ATAATGAGGAAATTACAGCAATCaaaaaaaTTGTTGGACTTGAACAAGGAAAAGTTTATG 400501 | || | |||||| ||| ||||| |||||||| ||| | | || |||| |||| Sbjct 872766 AAAACGCCGAAATTCAAGCTATCAAGAAAATTGTGGGATTACAGCATAAAAAAAAATATG 872825 Query 400502 ATGATCTCAAAGGTTTACGATATGGTAGTATTATGATTCTTGCTGATCAAGATGTTGATG 400561 | || ||| |||| ||||||||| ||| ||||| | | ||||||||| ||||| Sbjct 872826 AAGACACGAAAAGTTTGCGATATGGTCATATCATGATCATGACAGATCAAGATCATGATG 872885 Query 400562 GGTACCATATCAAAGGATTAATCATGAATTT 400592 | | |||||||| || | || || ||||| Sbjct 872886 GATCTCATATCAAGGGCCTGATTATCAATTT 872916 >seq5 Length=1414338 Score = 87.8 bits (96), Expect = 1e-11 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 432282 TTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCT 432341 |||| ||||||||||| ||||| ||||| ||||||||||| |||||||| ||| | ||| Sbjct 994773 TTGAAGGGTAAAGAAGGGCGTATCAGAGGTAATTTGATGGGGAAGCGTGTTGATTTTTCT 994832 Query 432342 GCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCC 432397 || ||||| || ||| | ||||| ||| | | | || | ||||||||||| Sbjct 994833 GCTCGTACGGTCATTTCAGGAGATCCAAATCTGGACTTGGATCAGGTTGGTGTTCC 994888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740630007233808