Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq5 98.7 2e-15 >seq5 Length=1414338 Score = 98.7 bits (108), Expect = 2e-15 Identities = 237/357 (66%), Gaps = 9/357 (3%) Strand=Plus/Plus Query 110538 ATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCT 110597 || || ||||| || || || ||||| || ||| || | ||||| ||| | ||||| Sbjct 885231 ATGAAGGATGACTCCATCGAGGGTATCTACGATACTTTGAAAGAGTGTGCAATGATTTCC 885290 Query 110598 AAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657 || | | || || || || | ||| |||| | || | || | ||| | | ||| Sbjct 885291 AAGACTGCCGGCGGTATCGGATTGCACATTCACAACATCAGGTCGACGGGATCCTACATC 885350 Query 110658 GCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACT 110717 || | || ||| | || | |||| | |||| ||| | | || || ||| ||||| Sbjct 885351 GCCGGTACCAACGGTACATCCAATGGATTGATTCCTATGATTCGTGTTTTTAACAACACT 885410 Query 110718 GCAAAATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAA 110774 || ||||| ||||||||||| || ||| ||| | ||||| || ||| | || Sbjct 885411 GCTCGCTATGTCGATCAAGGTGGTAACAAAAGACCTGGTGCTTTTGCCATTTATTTGGAG 885470 Query 110775 CCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAA 110834 || ||||| || ||||| ||||| || |||| | || || ||||| || | ||||| Sbjct 885471 CCATGGCACTCCGATATTTTTGACTTTATAGATATCCGGAAGAATCACGG---TAAAGAA 885527 Query 110835 CAAA---GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAA 110888 ||| | || || ||| | || |||| | |||||| ||||| | || |||||| Sbjct 885528 GAAATCCGTGCCCGGGATCTTTTCCCTGCATTATGGATTCCAGATCTTTTTATGAAA 885584 Score = 84.2 bits (92), Expect = 5e-11 Identities = 124/173 (72%), Gaps = 6/173 (3%) Strand=Plus/Plus Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377 ||||||||| ||| |||||||| | ||||| || |||||||||||||||||||||| Sbjct 995100 GACAATGATCCTGTTTTGTTCAATCGTCAACCTTCTTTGCATAAAATGTCTATGATGGCA 995159 Query 305378 CATAAAGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACG--- 305434 || | || ||||| | | | || || ||| | ||| | || | | |||| Sbjct 995160 CACAGGGTGAAAGTCATGCCGTACTCTACTTTCCGACTCAATTT--GTCCGT-TACGTCC 995216 Query 305435 CCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487 || |||||||| ||||| ||||| || |||||||| | || || || || || Sbjct 995217 CCATATAATGCCGATTTCGATGGTGACGAAATGAACCTTCACGTTCCACAGTC 995269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812678351688