Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq6 104 2e-17 seq8 102 5e-17 >seq6 Length=1501435 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||||| ||| || || || || | ||| |||||||| ||||||||||| || Sbjct 435037 ACCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGA 435096 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || ||||| ||||| || || |||||||| | || || ||| | || Sbjct 435097 CAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGG 435156 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| |||||||| ||| || ||| |||| || | |||||| ||||| | Sbjct 435157 GATACCCTCTTTGTCCTGAATCTTGGACTTC-ACATTATCGATGGTGTCAGAGGATTCAA 435215 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || ||||| || || || | ||||| ||||| |||||||| Sbjct 435216 CCTCGAGAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCAT 435264 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||||||||| || || || || ||||| |||||||| ||||||||||| || Sbjct 434040 ACCTCCTCTCAAACGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGA 434099 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || ||||| ||||| || || |||||||| | || || ||| | || Sbjct 434100 CAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGG 434159 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| |||||||| ||| || ||| |||| || | |||||| ||||| | Sbjct 434160 GATACCCTCTTTGTCCTGAATCTTGGACTTC-ACATTATCGATAGTGTCGGAAGATTCAA 434218 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || ||||| || || || | || || || || ||||||||| Sbjct 434219 CCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCATA 434268 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||||||||| || || || || | ||| |||||||| ||||||||||| || Sbjct 434809 ACCACCTCTCAAACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGA 434868 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || ||||| ||||| || || |||||||| | || || ||| | || Sbjct 434869 CAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGG 434928 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| |||||||| ||| || ||| |||| || | |||||| ||||| | Sbjct 434929 GATACCCTCTTTGTCCTGAATCTTGGACTTC-ACATTATCGATAGTGTCGGAAGATTCAA 434987 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | || ||||| || || || | || || || || ||||||||| Sbjct 434988 CCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCATA 435037 >seq8 Length=1778692 Score = 102 bits (112), Expect = 5e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||||||| | || ||||| || |||||| ||| ||||| |||||||| || || Sbjct 71424 ACCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGA 71365 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | || |||||||| || || ||||| ||||| | || || || | || Sbjct 71364 CAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGG 71305 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| || ||| | | |||| ||| | ||||||| ||||| | Sbjct 71304 AATACCTTCCTTGTCCTGGATCTTC-GACTTGACATTGTCAATGGTGTCGGAAGATTCGA 71246 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740 | || | ||||| || ||||| || || || || ||||| Sbjct 71245 CTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 71206 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||||||||| | || ||||| || || ||| || ||||| |||||||| |||| Sbjct 1641522 CACCACCTCTCAATCTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGG 1641463 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || | | | || |||||||| || || || || ||||| | ||||| || | | Sbjct 1641462 ACAAAGTTCTTCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTG 1641403 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||| ||||| || || | | |||| ||| | |||||| ||||| Sbjct 1641402 GGATACCTTCCTTGTCCTGGATCTT-GGACTTGACATTGTCGATGGTGTCAGAAGATTCA 1641344 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| || ||||| || | || || ||||| |||||||| Sbjct 1641343 ACCTCTAAGGTGATAGTCTTACCCGTAAGGGTCTTGACAAAAATCTGCAT 1641294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703967951360