Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq6 104 2e-17
seq8 102 5e-17
>seq6
Length=1501435
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||||| ||| || || || || | ||| |||||||| ||||||||||| ||
Sbjct 435037 ACCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGA 435096
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || ||||| ||||| || || |||||||| | || || ||| | ||
Sbjct 435097 CAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGG 435156
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| |||||||| ||| || ||| |||| || | |||||| ||||| |
Sbjct 435157 GATACCCTCTTTGTCCTGAATCTTGGACTTC-ACATTATCGATGGTGTCAGAGGATTCAA 435215
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | || ||||| || || || | ||||| ||||| ||||||||
Sbjct 435216 CCTCGAGAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCAT 435264
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| ||||||||||| || || || || ||||| |||||||| ||||||||||| ||
Sbjct 434040 ACCTCCTCTCAAACGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGA 434099
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || ||||| ||||| || || |||||||| | || || ||| | ||
Sbjct 434100 CAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGG 434159
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| |||||||| ||| || ||| |||| || | |||||| ||||| |
Sbjct 434160 GATACCCTCTTTGTCCTGAATCTTGGACTTC-ACATTATCGATAGTGTCGGAAGATTCAA 434218
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || ||||| || || || | || || || || |||||||||
Sbjct 434219 CCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCATA 434268
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||||||||| || || || || | ||| |||||||| ||||||||||| ||
Sbjct 434809 ACCACCTCTCAAACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGA 434868
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || ||||| ||||| || || |||||||| | || || ||| | ||
Sbjct 434869 CAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGG 434928
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| |||||||| ||| || ||| |||| || | |||||| ||||| |
Sbjct 434929 GATACCCTCTTTGTCCTGAATCTTGGACTTC-ACATTATCGATAGTGTCGGAAGATTCAA 434987
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || ||||| || || || | || || || || |||||||||
Sbjct 434988 CCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCATA 435037
>seq8
Length=1778692
Score = 102 bits (112), Expect = 5e-17
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||||||| | || ||||| || |||||| ||| ||||| |||||||| || ||
Sbjct 71424 ACCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGA 71365
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| || | | || |||||||| || || ||||| ||||| | || || || | ||
Sbjct 71364 CAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGG 71305
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| || ||| | | |||| ||| | ||||||| ||||| |
Sbjct 71304 AATACCTTCCTTGTCCTGGATCTTC-GACTTGACATTGTCAATGGTGTCGGAAGATTCGA 71246
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740
| || | ||||| || ||||| || || || || |||||
Sbjct 71245 CTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 71206
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
||||||||||||| | || ||||| || || ||| || ||||| |||||||| ||||
Sbjct 1641522 CACCACCTCTCAATCTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGG 1641463
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || | | | || |||||||| || || || || ||||| | ||||| || | |
Sbjct 1641462 ACAAAGTTCTTCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTG 1641403
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||| ||||| || || | | |||| ||| | |||||| |||||
Sbjct 1641402 GGATACCTTCCTTGTCCTGGATCTT-GGACTTGACATTGTCGATGGTGTCAGAAGATTCA 1641344
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | ||||| || ||||| || | || || ||||| ||||||||
Sbjct 1641343 ACCTCTAAGGTGATAGTCTTACCCGTAAGGGTCTTGACAAAAATCTGCAT 1641294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328703967951360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |