Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq8 129 1e-24
seq6 118 3e-21
>seq8
Length=1778692
Score = 129 bits (142), Expect = 1e-24
Identities = 154/208 (74%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || | || || || || |||||||||||||| ||| ||| ||||| |
Sbjct 71205 TTTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCAT 71264
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| || ||| ||||| || || || ||||| ||| || ||| |||||| |
Sbjct 71265 TGACAATGTCAAGTCGAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAACAAAGATT 71324
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
||||| || || ||||| ||||||||||| || |||||| | || |||||| |||| ||
Sbjct 71325 GATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTACAACATCCAAAA 71384
Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||||| ||||||||| | || ||||||
Sbjct 71385 GGAGTCCACTCTTCACTTGGTCTTGAGA 71412
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || || || || || || ||||| || || || ||| |||||||
Sbjct 1641297 CAGATTTTTGTCAAGACCCTTACGGGTAAGACTATCACCTTAGAGGTTGAATCTTCTGAC 1641356
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || || ||||| || || ||| |||
Sbjct 1641357 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATCCCACCTGACCAGCAA 1641416
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | |||||||| || ||||| |||||||||||||| |||||| |||| |||||| |
Sbjct 1641417 AGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGTCCGACTACAACATT 1641476
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|| || || || || || ||| | || ||||||
Sbjct 1641477 CAAAAGGAATCCACCCTGCACTTGGTCTTGAGA 1641509
>seq6
Length=1501435
Score = 118 bits (130), Expect = 3e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| ||||| ||||| ||| | || || ||| ||| |||
Sbjct 434264 CAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCCGAC 434205
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||||| || ||||| || || || ||| |||
Sbjct 434204 ACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAACAA 434145
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | || ||||| || || |||||||||||||| || || ||| | ||||||||| |
Sbjct 434144 AGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAACATT 434085
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382
|| ||||| || ||||| ||| | || |||
Sbjct 434084 CAAAAAGAATCAACTCTGCACTTAGTCTTG 434055
Score = 118 bits (130), Expect = 3e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| |||||| || || ||||| ||||| ||| | || || ||| ||||||
Sbjct 435261 CAGATTTTTGTCAAAACCCTTACGGGAAAGACGATTACTCTCGAGGTTGAATCCTCTGAC 435202
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||||| || ||||| || || || ||| |||
Sbjct 435201 ACCATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAACAA 435142
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | || ||||| || || |||||||||||||| || || ||| | ||||||||| |
Sbjct 435141 AGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAACATT 435082
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382
|| ||||| || ||| | ||| | || |||
Sbjct 435081 CAAAAAGAATCAACTTTGCACTTAGTCTTG 435052
Score = 113 bits (124), Expect = 1e-19
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| ||||| ||||| ||| | || || ||| ||| |||
Sbjct 435033 CAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCCGAC 434974
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| |||||||| || ||||| || || || ||| |||
Sbjct 434973 ACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAACAA 434914
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | || ||||| || || |||||||||||||| || || ||| | ||||||||| |
Sbjct 434913 AGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAACATT 434854
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTG 206382
|| ||||| || ||| | ||| | || |||
Sbjct 434853 CAAAAAGAATCAACTTTGCACTTAGTCTTG 434824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181820678863368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |