Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq6 114 1e-20
seq8 89.7 5e-13
>seq6
Length=1501435
Score = 114 bits (126), Expect = 1e-20
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | || || || || | || ||||| |||| || |||| || ||| | |
Sbjct 434267 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434208
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| |||||||| | || || || ||| || ||||||||||| || || || ||
Sbjct 434207 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434148
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | |||| || |||||||| | ||||||| ||||| |||| | ||||||
Sbjct 434147 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGG--ATTACA 434090
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| |||||||||||||| || | || ||||| || | |||||||||||
Sbjct 434089 ACATTCAAAAAGAATCAACTCTGCACTTAGTCTTGCGTTTGAGAGGAGG 434041
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | || || || || | || ||||| |||| || |||| || ||| | |
Sbjct 435036 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434977
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| |||||||| | || || || ||| || ||||||||||| || || || ||
Sbjct 434976 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434917
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | |||| || |||||||| | ||||||| ||||| |||| | ||||||
Sbjct 434916 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGG--ATTACA 434859
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| |||||||||||||| || | || ||||| || | |||||||| ||
Sbjct 434858 ACATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTTTGAGAGGTGG 434810
Score = 111 bits (122), Expect = 1e-19
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| ||||| | || ||||| |||| || |||| || ||| ||
Sbjct 435264 ATGCAGATTTTTGTCAAAACCCTTACGGGAAAGACGATTACTCTCGAGGTTGAATCCTCT 435205
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || ||||| | || || || ||| || ||||||||||| || || || ||
Sbjct 435204 GACACCATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 435145
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTACA 25352
|||||| | |||| || |||||||| | ||||||| ||||| |||| | ||||||
Sbjct 435144 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGG--ATTACA 435087
Query 25353 ATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401
| |||||||||||||| || | || ||||| || | ||||||| ||
Sbjct 435086 ACATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGAGAGGTGG 435038
>seq8
Length=1778692
Score = 89.7 bits (98), Expect = 5e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 25268 GATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAA 25327
|| || || ||||| || || || ||||||||| | || | || || || ||| | |||
Sbjct 1641387 GACAAGGAAGGTATCCCACCTGACCAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAA 1641446
Query 25328 GATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTA 25387
|||| |||| | | ||| ||||| |||||||| ||||||||| | || || || ||
Sbjct 1641447 GATGGAAGAACTTTGTCCGACTACAACATTCAAAAGGAATCCACCCTGCACTTGGTCTTG 1641506
Query 25388 AGATTGAGAGGAGG 25401
||||||||||| ||
Sbjct 1641507 AGATTGAGAGGTGG 1641520
Score = 87.8 bits (96), Expect = 2e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 110719 GATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTTTAAGAAA 110778
|| ||| | |||||| || |||| | ||||||||||| || || || || ||| ||
Sbjct 705285 GAGATTTTCGTTCACAATACCGTCCGAAGCAGCGAAAAACGCAAGCACACGTGAAAGGAA 705226
Query 110779 GAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACATGTCGAT 110838
||| || || || ||||||| ||||||||||| | ||||||||||||| |||||
Sbjct 705225 GAACCGCTCGTTCTCGTTCATACGGTTGTTCCAGTCGTGCAAGTCCTTGGACAAATCGAT 705166
Query 110839 CTCTTCGACCTTCCAG 110854
||| || || |||||
Sbjct 705165 CTCCTCTGCCGTCCAG 705150
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445094355490560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |