Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq6 120 3e-22
seq8 102 8e-17
>seq6
Length=1501435
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|||||||| | ||||| || | ||| || || ||||| |||||||||||||| || | |
Sbjct 434041 CCTCCTCTCAAACGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434100
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | ||||||||| || |||||||| | || || || || ||
Sbjct 434101 AAGGTTCTACCA-TCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGG 434159
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || ||||| || ||||| || || || || | |||||||| ||||| ||
Sbjct 434160 GATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAAC 434219
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||||||||| || || || || | || || |||||||| |||||
Sbjct 434220 CTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267
Score = 114 bits (126), Expect = 1e-20
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| || ||||| || | ||| | || ||||| |||||||||||||| || | |
Sbjct 435038 CCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 435097
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | ||||||||| || |||||||| | || || || || ||
Sbjct 435098 AAGGTTCTACCA-TCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGG 435156
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || ||||| || ||||| || || || || | ||||| || ||||| ||
Sbjct 435157 GATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAAC 435216
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTT 134715
||||||||||| || || || || | ||||| || ||||| |||||||
Sbjct 435217 CTCGAGAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCATTT 435266
Score = 111 bits (122), Expect = 2e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | ||||| || | ||| | || ||||| |||||||||||||| || | |
Sbjct 434810 CCACCTCTCAAACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434869
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | ||||||||| || |||||||| | || || || || ||
Sbjct 434870 AAGGTTCTACCA-TCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGG 434928
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| || ||||| || ||||| || || || || | |||||||| ||||| ||
Sbjct 434929 GATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAAC 434988
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||||||||| || || || || | || || |||||||| |||||
Sbjct 434989 CTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036
>seq8
Length=1778692
Score = 102 bits (112), Expect = 8e-17
Identities = 156/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | ||| || ||||| |||||||| ||||||||||| | |
Sbjct 71423 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 71364
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | || | || || | || || || ||||| ||||| | || || || || ||
Sbjct 71363 AAAGTTCTGCCA-TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGG 71305
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || || || || || ||||| ||| | |||||||| ||||| ||
Sbjct 71304 AATACCTTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGAC 71245
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705
|| | ||| ||||| ||||| || || || || || |||
Sbjct 71244 TTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAAA 71205
Score = 98.7 bits (108), Expect = 1e-15
Identities = 165/236 (70%), Gaps = 2/236 (1%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545
|| ||||| | || ||| || | ||| || |||||||||||||||||||||||||| | |
Sbjct 1641520 CCACCTCTCAATCTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGAC 1641461
Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605
|| | | | | || || | || || || || || ||||| | ||||| || || ||
Sbjct 1641460 AAAGTTCTTCCA-TCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGG 1641402
Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665
|| ||||| || || || || || ||||| ||| | ||||| || ||||| ||
Sbjct 1641401 GATACCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAAGATTCAAC 1641342
Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTT 134721
|| | || || || ||||| || | || || || ||||| ||||| || |||
Sbjct 1641341 CTCTAAGGTGATAGTCTTACCCGTAAGGGTCTTGACAAAAATCTGCATCCTGGTTT 1641286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505398349460160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |