Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq6 120 3e-22 seq8 102 8e-17 >seq6 Length=1501435 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 |||||||| | ||||| || | ||| || || ||||| |||||||||||||| || | | Sbjct 434041 CCTCCTCTCAAACGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434100 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | ||||||||| || |||||||| | || || || || || Sbjct 434101 AAGGTTCTACCA-TCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGG 434159 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || ||||| || ||||| || || || || | |||||||| ||||| || Sbjct 434160 GATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAAC 434219 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||||| || || || || | || || |||||||| ||||| Sbjct 434220 CTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| || ||||| || | ||| | || ||||| |||||||||||||| || | | Sbjct 435038 CCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 435097 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | ||||||||| || |||||||| | || || || || || Sbjct 435098 AAGGTTCTACCA-TCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGG 435156 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || ||||| || ||||| || || || || | ||||| || ||||| || Sbjct 435157 GATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAAC 435216 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTT 134715 ||||||||||| || || || || | ||||| || ||||| ||||||| Sbjct 435217 CTCGAGAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCATTT 435266 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | ||||| || | ||| | || ||||| |||||||||||||| || | | Sbjct 434810 CCACCTCTCAAACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434869 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | ||||||||| || |||||||| | || || || || || Sbjct 434870 AAGGTTCTACCA-TCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGG 434928 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || ||||| || ||||| || || || || | |||||||| ||||| || Sbjct 434929 GATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAAC 434988 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||||||||| || || || || | || || |||||||| ||||| Sbjct 434989 CTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036 >seq8 Length=1778692 Score = 102 bits (112), Expect = 8e-17 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || ||| || | ||| || ||||| |||||||| ||||||||||| | | Sbjct 71423 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 71364 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | || | || || | || || || ||||| ||||| | || || || || || Sbjct 71363 AAAGTTCTGCCA-TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGG 71305 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || || || || || ||||| ||| | |||||||| ||||| || Sbjct 71304 AATACCTTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGAC 71245 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 || | ||| ||||| ||||| || || || || || ||| Sbjct 71244 TTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAAA 71205 Score = 98.7 bits (108), Expect = 1e-15 Identities = 165/236 (70%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | || ||| || | ||| || |||||||||||||||||||||||||| | | Sbjct 1641520 CCACCTCTCAATCTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGAC 1641461 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | | || || | || || || || || ||||| | ||||| || || || Sbjct 1641460 AAAGTTCTTCCA-TCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGG 1641402 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || ||||| || || || || || ||||| ||| | ||||| || ||||| || Sbjct 1641401 GATACCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAAGATTCAAC 1641342 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTT 134721 || | || || || ||||| || | || || || ||||| ||||| || ||| Sbjct 1641341 CTCTAAGGTGATAGTCTTACCCGTAAGGGTCTTGACAAAAATCTGCATCCTGGTTT 1641286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398349460160