Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq5 266 4e-66 >seq5 Length=1414338 Score = 266 bits (294), Expect = 4e-66 Identities = 914/1407 (65%), Gaps = 45/1407 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||| | |||||| || ||||| |||||||| |||||||| ||||| | || || Sbjct 886454 GTACATGTTAGATGTGTAAGGCTCAAAACATTCATTGTTACCCAAAATTTGCGAAGTAGA 886395 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT- 110825 || ||||||||||| || | || || || | | ||| | | |||| | Sbjct 886394 TGCCGTTGGCATTGGCGCTAGCAGGAGCGAATTTCTGATACCAT---CTTTGACAATCTT 886338 Query 110826 --CCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACT 110882 ||||||| |||||||||| | | | |||| ||| |||| |||||||||| | Sbjct 886337 GGCCTTGAGGCCATCCCAGTCCCACAAGTCGGTTGGCTTCTTGTTCC-ACATGTCAAATT 886279 Query 110883 GAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCA- 110941 | | | ||||| || || || || ||| |||| |||||||||| |||| ||||| Sbjct 886278 GCAAAATACCTTGCGATGCTGGGGACCCCGCAAATGTTTCATAGGGTCCTTC--CTTCAA 886221 Query 110942 -GCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 111000 || | |||| ||| || |||||||| ||||| || ||||| || || Sbjct 886220 GGCTAGTTCATGCGACGCAGTCAACCCAGCGTGATAAATGGTCTCGAAGATGTGAATGTT 886161 Query 111001 CATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGA 111059 || |||||| ||||| | ||||| || | | | ||| || || || |||| || | Sbjct 886160 CAACTCCTTCGCTTCTTGGGAATCGAAGG-GAATACGCAAAAGCATGAAAGCATCGGCAA 886102 Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAA 111119 |||||||||| || | |||| ||||| |||| ||||||||| |||| || ||||||| Sbjct 886101 GACCTTGAACCCCGAGGGCAATTGGTCTATGTCTCATATTAGATTTTCTGGCCGTCTCAA 886042 Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179 | || ||| | || | ||| |||| || ||| | ||| | || || | ||||| || | Sbjct 886041 CTGGGTAATAGTTACGGTCGATGATTCTGTTCAAATTGTAAGTGACGACCTTTGCAATCT 885982 Query 111180 CATGAAGTTTTTCATAATCAAAAGTGCGAGTCT---CTTCATTGACATACTT-------- 111228 |||||||||| ||| | | | |||||| | ||| | | || || Sbjct 885981 CATGAAGTTTCTCAAAGTTGTACCATTGAGTCTTGCCGTCA-TCAGATGTTTCGATGAAT 885923 Query 111229 --TGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCT 111286 ||| | | || ||||| | ||| || || || || ||| | || | |||||| Sbjct 885922 GCTGGCAAAGAAATAGATGCAAGATTACAGACTGCAGTTTCACCAGGTTCAGAGTACTCA 885863 Query 111287 AAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTC 111346 | ||| || || ||||||||| || || || ||||||||||||||| || Sbjct 885862 ACAATCTCACAGCACAAGTTGGAAGATTTGATGACACCTAAATTCTTTTGGTTAGATTTT 885803 Query 111347 TTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGA 111406 ||||||| || || || || |||||| | || || || || || ||||||| || | Sbjct 885802 CTGTTGCATGCGTCTTTATAAAGCATGAAAGGAGTACCAGTTTCAGTCTGTGCTTCTAAG 885743 Query 111407 ATAGCCTTCCA-AACATCGGCGGCTGGTACAATGGCGT---TGGCCCGTCCCTCCGCCTC 111462 ||||| | ||| | || | | || | |||| | | | || ||||| | Sbjct 885742 ATAGCGTACCACAGTTTCTGAGCCTTG----ATGGTCTTTCTACCGCGACCCTCTTGAAC 885687 Query 111463 GTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT 111522 ||| || | || | ||||| || || |||| | | ||||| |||| Sbjct 885686 GTAACGCTCATATAAAGCCACGAACTCATCGCCATAAACGTCCGCCAATCCTGGCGCCTC 885627 Query 111523 GTCTGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGG 111582 | |||| | || | || ||| | || ||||| |||| ||||| ||||| ||||| Sbjct 885626 GCTTGGAGAAAACAAAGTCCAGTCTCCGTTCTCCTCGACCCTTTTCATAAAAAGATCTGG 885567 Query 111583 AATCCACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTC 111641 |||||| | | | || ||||| | ||| || ||||| | ||| || || | Sbjct 885566 AATCCATAATGCAGGGAAAAGATCCCGGGCACGGA-TTTCTTCTTTACCGTGATTCTTCC 885508 Query 111642 GTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC 111701 | | || | || || | ||||| | |||||||||||| | ||| | || | || | Sbjct 885507 GGATATCTATAAAGTCAAAAATATCGGAGTGCCATGGCTCCAAATAAATGGCAAAAGCAC 885448 Query 111702 C----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGC 111757 | |||| | ||| |||||| |||||||| || ||| |||||| || |||| | Sbjct 885447 CAGGTCTTTTG-TTACCACCTTGATCGACATAGCGAGCAGTGTTGTTAAAAACACGAATC 885389 Query 111758 ATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTC 111817 || ||||| | |||| ||| ||| || || || || ||| | | || Sbjct 885388 ATAGGAATCAATCCATTGGATGTACCGTTGGTACCGGCGATGTAGGATCCCGTCGACCTG 885329 Query 111818 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 111877 | | || ||||||| || ||||| || || ||| || || |||||||| | Sbjct 885328 ATGTTGTGAATGTGCAATCCGATACCGCCGGCAGTCTTGGAAATCATTGCACACTCTTTC 885269 Query 111878 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 111937 | ||| | |||||||| | ||| ||||| ||||| |||||| | || || ||| Sbjct 885268 AAAGTATCGTAGATACCCTCGATGGAGTCATCCTTCATGGCGACCAAAAAACAGGACGAC 885209 Query 111938 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 111997 ||||| || || |||||||| ||||| |||||||| | || || | || ||| || Sbjct 885208 ATCTGAGGGTGCGGCGTACCAGCGTTGAAAAGGGTTGGCGAGGCATGCGT-AAAATATCT 885150 Query 111998 -TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGAT 112056 ||||||| | ||| ||||| | || ||||| | ||||| ||||||| Sbjct 885149 GAGGGACATTAGATTGTAAGTCTCGATCACCTTTTCAATATTGGTTCCGTGTATGCCGAC 885090 Query 112057 TGCGACCCGCATGAACATGTACTGTGG 112083 || || ||||||| | || ||||| Sbjct 885089 GGCAACACGCATGACAAGGTGTTGTGG 885063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031937196800