Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5 232 8e-56 >seq5 Length=1414338 Score = 232 bits (256), Expect = 8e-56 Identities = 824/1276 (65%), Gaps = 25/1276 (2%) Strand=Plus/Minus Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253 ||||| |||||||| || |||||||||||||| ||||| | || || || || ||||| Sbjct 886441 GTGTAAGGCTCAAAACATTCATTGTTACCCAAAATTTGCGAAGTAGATGCCGTTGGCATT 886382 Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCC 118313 || || | || || || | || ||| | || ||| ||||||| | ||| Sbjct 886381 GGCGCTAGCAGGAGCGAATTTCTGATACCATCTTTGACAATCTTGGCCTTGAGGCCATCC 886322 Query 118314 CAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAC 118373 ||||| | | ||| || | | |||||| ||||| || | |||||||| || Sbjct 886321 CAGTCCCACAAGTCGGTTGGCTTCTTGTTCCACATGTCAAATTGCAAAATACCTTGCGAT 886262 Query 118374 GCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCC 118433 ||||| || ||| ||||||| ||||| || || || | || | ||| ||| Sbjct 886261 GCTGGGGACCCCGCAAATGTTTCATAGGGTCCTTCCTTCAAGGCTAGTTCATGCGACGCA 886202 Query 118434 TCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCG 118493 | | |||||||| || || || || ||| || |||| |||| || || | | Sbjct 886201 GTCAACCCAGCGTGATAAATGGTCTCGAAGATGTGAATGTTCAACTCCTTCGCTTCTTGG 886142 Query 118494 GAATCAAACGCGAGTCGGCACAAA-ATAAATACATCCGCGAGACCTTGGACACCGAGGCC 118552 ||||| || | || | ||| || || || |||| || |||||||| || |||||| | Sbjct 886141 GAATCGAAGG-GAATACGCAAAAGCATGAAAGCATCGGCAAGACCTTGAACCCCGAGGGC 886083 Query 118553 AATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATC 118612 |||||| | ||||||||||||||| || | || ||||| || || ||| | || | || Sbjct 886082 AATTGGTCTATGTCTCATATTAGATTTTCTGGCCGTCTCAACTGGGTAATAGTTACGGTC 886023 Query 118613 GATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC 118672 ||| | || || | ||| | ||||| ||||||| || |||||||| || || | | Sbjct 886022 GATGATTCTGTTCAAATTGTAAGTGACGACCTTTGCAATCTCATGAAGTTTCTCAAAGTT 885963 Query 118673 AAAACTGCGAGTCT---CTTCATTGACATACTT--AGGAAGG--------GCGATTGACG 118719 | | |||||| | ||| | | || || | ||| | | || || | Sbjct 885962 GTACCATTGAGTCTTGCCGTCA-TCAGATGTTTCGATGAATGCTGGCAAAGAAATAGATG 885904 Query 118720 CCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGT 118779 | |||||||| || | || ||| | |||| |||||| | ||| || |||||||| Sbjct 885903 CAAGATTACAGACTGCAGTTTCACCAGGTTCAGAGTACTCAACAATCTCACAGCACAAGT 885844 Query 118780 TTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGT 118839 | ||| || ||| || || |||||||| || || ||| |||| || || || || | Sbjct 885843 TGGAAGATTTGATGACACCTAAATTCTTTTGGTTAGATTTTCTGTTGCATGCGTCTTTAT 885784 Query 118840 AAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGG 118899 |||||||| | || || || || || || || | | | ||||| | ||| | | Sbjct 885783 AAAGCATGAAAGGAGTACCAGTTTCAGTCTGTGCTTCTAAGATAGCGTACCACAGTTTCT 885724 Query 118900 CAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAA 118959 ||| | || | | || ||||||| |||| || | || | | Sbjct 885723 GAGCCTTGATGGTCTTTCTACCGCGACCCTCTTGAACGTAACGCTCATATAAAGCCACGA 885664 Query 118960 ACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATT 119019 |||| || || | || | | ||||| |||| ||| | || | || ||| | Sbjct 885663 ACTCATCGCCATAAACGTCCGCCAATCCTGGCGCCTCGCTTGGAGAAAACAAAGTCCAGT 885604 Query 119020 GACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGAT 119079 || |||||| |||| ||||| || || ||||| ||||| | || | ||| |||| Sbjct 885603 CTCCGTTCTCCTCGACCCTTTTCATAAAAAGATCTGGAATCCATAATGCAGGGAAAAGAT 885544 Query 119080 CCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATAT 119139 |||| || |||||| | || ||||| || | || | |||||| | |||| Sbjct 885543 CCCGGGCACGGATTTCTTCTTTACCGTGATTCTTCCGGATATCTATAAAGTCAAAAATAT 885484 Query 119140 CCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACCAGCCTGG 119195 | | |||||| || |||| || | || | | ||| ||| | |||| | || Sbjct 885483 CGGAGTGCCATGGCTCCAAATAAATGGCAAAAGCACCAGGTCTTTTG-TTACCACCTTGA 885425 Query 119196 TTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGG 119255 | ||||| | |||||| |||||| ||||||| ||| ||||| | |||| |||| Sbjct 885424 TCGACATAGCGAGCAGTGTTGTTAAAAACACGAATCATAGGAATCAATCCATTGGATGTA 885365 Query 119256 CCATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAA 119313 || || || || ||| || || | | | |||| | ||| ||||||| || | Sbjct 885364 CCGTTGGTACCGGCGATGTAGGATCC--CGTCGACCTGATGTTGTGAATGTGCAATCCGA 885307 Query 119314 TACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGA 119373 |||| || || ||| || || || ||||| | | | | ||||||| || |||| Sbjct 885306 TACCGCCGGCAGTCTTGGAAATCATTGCACACTCTTTCAAAGTATCGTAGATACCCTCGA 885247 Query 119374 TCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAG 119433 | |||||| |||| | |||| | || ||| |||||| ||||| || ||||||| Sbjct 885246 TGGAGTCATCCTTCATGGCGACCAAAAAACAGGACGACATCTGAGGGTGCGGCGTACCAG 885187 Query 119434 CGTTGAAGAGAGTTGG 119449 ||||||| || ||||| Sbjct 885186 CGTTGAAAAGGGTTGG 885171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435138156480