Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq5 259 6e-64
seq1 84.2 3e-11
>seq5
Length=1414338
Score = 259 bits (286), Expect = 6e-64
Identities = 910/1402 (65%), Gaps = 37/1402 (3%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
||||| || | ||||||| || ||| |||| || || || | ||||| ||
Sbjct 885063 CCACAACACCTTGTCATGCGTGTTGCCGTCGGCATACACGGAACCAATATTGAAAAGGTG 885122
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| | ||||||| || ||| || | || || | |||||||| ||
Sbjct 885123 ATCGAGACTTACAATCTAATGTCCCTCAGATATTTT-ACGCATGCCTCGCCAACCCTTTT 885181
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||| |||||||| || || || ||||| || || | |||||| ||||| ||
Sbjct 885182 CAACGCTGGTACGCCGCACCCTCAGATGTCGTCCTGTTTTTTGGTCGCCATGAAGGATGA 885241
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
||| ||| | |||||||| | ||| | | |||||||| || || ||| || ||
Sbjct 885242 CTCCATCGAGGGTATCTACGATACTTTGAAAGAGTGTGCAATGATTTCCAAGACTGCCGG 885301
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
||||| || ||||||| || | | || | | ||| || || || ||
Sbjct 885302 CGGTATCGGATTGCACATTCACAACATCAGGTCGACGGGATCCTACATCGCCGGTACCAA 885361
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
||| ||| |||| | ||||| ||| |||| || |||||| ||| || ||||||||
Sbjct 885362 CGGTACATCCAATGGATTGATTCCTATGATTCGTGTTTTTAACAACACTGCTCGCTATGT 885421
Query 104581 AAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACG 104636
|||||| ||| | |||| || || | || | ||| | ||||||||||||
Sbjct 885422 CGATCAAGGTGGTAA-CAAAAGACCTGGTGCTTTTGCCATTTATTTGGAGCCATGGCACT 885480
Query 104637 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC 104696
| ||||| | || || | || | || || || ||| | || || || ||
Sbjct 885481 CCGATATTTTTGACTTTATAGATATCCGGAAGAATCACGGTAAAGAAGAAATCCGTGCCC 885540
Query 104697 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTG 104756
| ||||| ||| | || | |||||||||||||| || ||||| || || ||||||| |
Sbjct 885541 GGGATCTTTTCCCTGCATTATGGATTCCAGATCTTTTTATGAAAAGGGTCGAGGAGAACG 885600
Query 104757 GCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816
| | ||| || | |||| |||| | |||| || || | | || | || || |
Sbjct 885601 GAGACTGGACTTTGTTTTCTCCAAGCGAGGCGCCAGGATTGGCGGACGTTTATGGCGATG 885660
Query 104817 AGTTTGAAGCCCTTTACACAAAG--TACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCC 104874
|||| | || |||| | | |||| |||| ||||| | | ||| |
Sbjct 885661 AGTTCGTGGC--TTTATATGAGCGTTACGTTCAAGAGGGTCGCGGTAGAAAGACCATCAA 885718
Query 104875 AGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACAT 104934
||| | ||||| | ||||| | | | || || || |||||||| || | |||
Sbjct 885719 GGCTCAGAAACTGTGGTACGCTATCTTAGAAGCACAGACTGAAACTGGTACTCCTTTCAT 885778
Query 104935 GCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAG 104994
|||||| |||||||| || ||| ||| ||| ||||||||||| ||||| |||||
Sbjct 885779 GCTTTATAAAGACGCATGCAACAGAAAATCTAACCAAAAGAATTTAGGTGTCATCAAATC 885838
Query 104995 TTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAA 105054
|||||| | || || || | || | | || | ||| || || || |||||
Sbjct 885839 TTCCAACTTGTGCTGTGAGATTGTTGAGTACTCTGAACCTGGTGAAACTGCAGTCTGTAA 885898
Query 105055 CCTCGCATCAATCGCTCTCCCCAAGTATG--TGGATCCA---GA-GACA--AAGAC--AT 105104
|| ||||| || || | || || || | || || || ||| ||||| |
Sbjct 885899 TCTTGCATCTATTTCTTTGCC--AGCATTCATCGAAACATCTGATGACGGCAAGACTCAA 885956
Query 105105 TTG----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160
| | | | ||| ||||| || || || | || ||||| | || | ||||||
Sbjct 885957 TGGTACAACTTTGAGAAACTTCATGAGATTGCAAAGGTCGTCACTTACAATTTGAACAGA 886016
Query 105161 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220
| || || | || | |||||| |||||||| || | ||||||||||||||||| |
Sbjct 886017 ATCATCGACCGTAACTATTACCCAGTTGAGACGGCCAGAAAATCTAATATGAGACATAGA 886076
Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT 105280
||||||| ||||| ||||| ||||| || |||| ||||| |||| || | ||
Sbjct 886077 CCAATTGCCCTCGGGGTTCAAGGTCTTGCCGATGCTTTCATGCTTTTGCGTATTCCCTTC 886136
Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340
|||||| | ||||||||||| | || | ||| || |||||||| |||||||| |
Sbjct 886137 GATTCCCAAGAAGCGAAGGAGTTGAACATTCACATCTTCGAGACCATTTATCACGCTG-G 886195
Query 105341 CTTGA-GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399
|||| ||| || | || | || || || |||||||| |||| ||| ||
Sbjct 886196 GTTGACTGCGTCGCATGAACTAGCCTTGAAGGAAGGACCCTATGAAACATTTGCGGGGTC 886255
Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTC-ACT 105458
||||| || ||||| | | |||||||| |||| |||| || |||| | | |
Sbjct 886256 CCCAGCATCGCAAGGTATTTTGCAATTTGACATGT-GGAACAAGAAGCCAACCGACTTGT 886314
Query 105459 ACGACTGGGAAGCTCTCAAGG---AACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515
|||||||| | ||||||| | |||| | | ||| | | || ||||
Sbjct 886315 GGGACTGGGATGGCCTCAAGGCCAAGATTGTCAAAG---ATGGTATCAGAAATTCGCTCC 886371
Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575
| | || ||||||||||| || || || | ||||| |||||||| |||||||| ||||
Sbjct 886372 TGCTAGCGCCAATGCCAACGGCATCTACTTCGCAAATTTTGGGTAACAATGAATGTTTTG 886431
Query 105576 AACCCTACACGACGAACATCTA 105597
| || ||||| | ||||| ||
Sbjct 886432 AGCCTTACACATCTAACATGTA 886453
>seq1
Length=824037
Score = 84.2 bits (92), Expect = 3e-11
Identities = 189/280 (68%), Gaps = 3/280 (1%)
Strand=Plus/Plus
Query 9691 TTGCTTTCCCAC-GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAG 9749
|| |||| ||| |||||| || ||||||| |||| ||| ||| ||| | ||
Sbjct 653599 TTTCTTTACCAATGGCATCTATTTCATCAACAAAGATAATGGCAGGTGCCATTTTTCTAG 653658
Query 9750 CGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGT 9809
|| ||| || || || || || || || || |||||||||||||| || ||||| |
Sbjct 653659 CGGTTTCGAATAGGTCGCGCACGCGGGATGCACCGACACCAACAAACATTTCAACAAATT 653718
Query 9810 TTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 9868
| | |||| ||| | || || || | |||||| || ||||| ||| |||
Sbjct 653719 CCGAGCCGGATACAGACAAA-AACGGCACCCCGGCTTCACCTGCCGTGGCTTTGGCCAGA 653777
Query 9869 AGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 9928
||||||||||| ||||| || || | | | ||| || |||||||||||||| |||
Sbjct 653778 AGAGTCTTACCAGTACCGGGTGGTCCAGACAAAATGGCGCCACGTGGAATCTTGGCACCA 653837
Query 9929 CTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAA 9968
| | |||| | || |||| | | ||||| |||||
Sbjct 653838 AGTGCTCTGTATTTGTCCGGTTTTTGCAAAAAATGCACAA 653877
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260741673920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |