Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq5 259 6e-64 seq1 84.2 3e-11 >seq5 Length=1414338 Score = 259 bits (286), Expect = 6e-64 Identities = 910/1402 (65%), Gaps = 37/1402 (3%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| || | ||||||| || ||| |||| || || || | ||||| || Sbjct 885063 CCACAACACCTTGTCATGCGTGTTGCCGTCGGCATACACGGAACCAATATTGAAAAGGTG 885122 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | ||||| ||| | ||||||| || ||| || | || || | |||||||| || Sbjct 885123 ATCGAGACTTACAATCTAATGTCCCTCAGATATTTT-ACGCATGCCTCGCCAACCCTTTT 885181 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| |||||||| || || || ||||| || || | |||||| ||||| || Sbjct 885182 CAACGCTGGTACGCCGCACCCTCAGATGTCGTCCTGTTTTTTGGTCGCCATGAAGGATGA 885241 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| ||| | |||||||| | ||| | | |||||||| || || ||| || || Sbjct 885242 CTCCATCGAGGGTATCTACGATACTTTGAAAGAGTGTGCAATGATTTCCAAGACTGCCGG 885301 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 ||||| || ||||||| || | | || | | ||| || || || || Sbjct 885302 CGGTATCGGATTGCACATTCACAACATCAGGTCGACGGGATCCTACATCGCCGGTACCAA 885361 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 ||| ||| |||| | ||||| ||| |||| || |||||| ||| || |||||||| Sbjct 885362 CGGTACATCCAATGGATTGATTCCTATGATTCGTGTTTTTAACAACACTGCTCGCTATGT 885421 Query 104581 AAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCACG 104636 |||||| ||| | |||| || || | || | ||| | |||||||||||| Sbjct 885422 CGATCAAGGTGGTAA-CAAAAGACCTGGTGCTTTTGCCATTTATTTGGAGCCATGGCACT 885480 Query 104637 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCC 104696 | ||||| | || || | || | || || || ||| | || || || || Sbjct 885481 CCGATATTTTTGACTTTATAGATATCCGGAAGAATCACGGTAAAGAAGAAATCCGTGCCC 885540 Query 104697 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTG 104756 | ||||| ||| | || | |||||||||||||| || ||||| || || ||||||| | Sbjct 885541 GGGATCTTTTCCCTGCATTATGGATTCCAGATCTTTTTATGAAAAGGGTCGAGGAGAACG 885600 Query 104757 GCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816 | | ||| || | |||| |||| | |||| || || | | || | || || | Sbjct 885601 GAGACTGGACTTTGTTTTCTCCAAGCGAGGCGCCAGGATTGGCGGACGTTTATGGCGATG 885660 Query 104817 AGTTTGAAGCCCTTTACACAAAG--TACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCC 104874 |||| | || |||| | | |||| |||| ||||| | | ||| | Sbjct 885661 AGTTCGTGGC--TTTATATGAGCGTTACGTTCAAGAGGGTCGCGGTAGAAAGACCATCAA 885718 Query 104875 AGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACAT 104934 ||| | ||||| | ||||| | | | || || || |||||||| || | ||| Sbjct 885719 GGCTCAGAAACTGTGGTACGCTATCTTAGAAGCACAGACTGAAACTGGTACTCCTTTCAT 885778 Query 104935 GCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAG 104994 |||||| |||||||| || ||| ||| ||| ||||||||||| ||||| ||||| Sbjct 885779 GCTTTATAAAGACGCATGCAACAGAAAATCTAACCAAAAGAATTTAGGTGTCATCAAATC 885838 Query 104995 TTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAA 105054 |||||| | || || || | || | | || | ||| || || || ||||| Sbjct 885839 TTCCAACTTGTGCTGTGAGATTGTTGAGTACTCTGAACCTGGTGAAACTGCAGTCTGTAA 885898 Query 105055 CCTCGCATCAATCGCTCTCCCCAAGTATG--TGGATCCA---GA-GACA--AAGAC--AT 105104 || ||||| || || | || || || | || || || ||| ||||| | Sbjct 885899 TCTTGCATCTATTTCTTTGCC--AGCATTCATCGAAACATCTGATGACGGCAAGACTCAA 885956 Query 105105 TTG----ATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGA 105160 | | | | ||| ||||| || || || | || ||||| | || | |||||| Sbjct 885957 TGGTACAACTTTGAGAAACTTCATGAGATTGCAAAGGTCGTCACTTACAATTTGAACAGA 886016 Query 105161 GTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGT 105220 | || || | || | |||||| |||||||| || | ||||||||||||||||| | Sbjct 886017 ATCATCGACCGTAACTATTACCCAGTTGAGACGGCCAGAAAATCTAATATGAGACATAGA 886076 Query 105221 CCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTT 105280 ||||||| ||||| ||||| ||||| || |||| ||||| |||| || | || Sbjct 886077 CCAATTGCCCTCGGGGTTCAAGGTCTTGCCGATGCTTTCATGCTTTTGCGTATTCCCTTC 886136 Query 105281 GATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCT 105340 |||||| | ||||||||||| | || | ||| || |||||||| |||||||| | Sbjct 886137 GATTCCCAAGAAGCGAAGGAGTTGAACATTCACATCTTCGAGACCATTTATCACGCTG-G 886195 Query 105341 CTTGA-GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399 |||| ||| || | || | || || || |||||||| |||| ||| || Sbjct 886196 GTTGACTGCGTCGCATGAACTAGCCTTGAAGGAAGGACCCTATGAAACATTTGCGGGGTC 886255 Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTC-ACT 105458 ||||| || ||||| | | |||||||| |||| |||| || |||| | | | Sbjct 886256 CCCAGCATCGCAAGGTATTTTGCAATTTGACATGT-GGAACAAGAAGCCAACCGACTTGT 886314 Query 105459 ACGACTGGGAAGCTCTCAAGG---AACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515 |||||||| | ||||||| | |||| | | ||| | | || |||| Sbjct 886315 GGGACTGGGATGGCCTCAAGGCCAAGATTGTCAAAG---ATGGTATCAGAAATTCGCTCC 886371 Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 105575 | | || ||||||||||| || || || | ||||| |||||||| |||||||| |||| Sbjct 886372 TGCTAGCGCCAATGCCAACGGCATCTACTTCGCAAATTTTGGGTAACAATGAATGTTTTG 886431 Query 105576 AACCCTACACGACGAACATCTA 105597 | || ||||| | ||||| || Sbjct 886432 AGCCTTACACATCTAACATGTA 886453 >seq1 Length=824037 Score = 84.2 bits (92), Expect = 3e-11 Identities = 189/280 (68%), Gaps = 3/280 (1%) Strand=Plus/Plus Query 9691 TTGCTTTCCCAC-GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAG 9749 || |||| ||| |||||| || ||||||| |||| ||| ||| ||| | || Sbjct 653599 TTTCTTTACCAATGGCATCTATTTCATCAACAAAGATAATGGCAGGTGCCATTTTTCTAG 653658 Query 9750 CGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGT 9809 || ||| || || || || || || || || |||||||||||||| || ||||| | Sbjct 653659 CGGTTTCGAATAGGTCGCGCACGCGGGATGCACCGACACCAACAAACATTTCAACAAATT 653718 Query 9810 TTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 9868 | | |||| ||| | || || || | |||||| || ||||| ||| ||| Sbjct 653719 CCGAGCCGGATACAGACAAA-AACGGCACCCCGGCTTCACCTGCCGTGGCTTTGGCCAGA 653777 Query 9869 AGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCA 9928 ||||||||||| ||||| || || | | | ||| || |||||||||||||| ||| Sbjct 653778 AGAGTCTTACCAGTACCGGGTGGTCCAGACAAAATGGCGCCACGTGGAATCTTGGCACCA 653837 Query 9929 CTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAA 9968 | | |||| | || |||| | | ||||| ||||| Sbjct 653838 AGTGCTCTGTATTTGTCCGGTTTTTGCAAAAAATGCACAA 653877 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260741673920