Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq5 168 7e-37 seq8 114 1e-20 >seq5 Length=1414338 Score = 168 bits (186), Expect = 7e-37 Identities = 1058/1690 (63%), Gaps = 41/1690 (2%) Strand=Plus/Plus Query 19165 CGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAA 19224 |||||| ||| | || ||| || | | || ||||| || |||| ||||||||||| Sbjct 885125 CGAGACTTACAATCTAATGTCCCTCAGATATTTTACGCATGCCTCGCCAACCCTTTTCAA 885184 Query 19225 CGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAG 19284 ||| |||||| |||| ||||||||| |||||| | || || |||||||||||| Sbjct 885185 CGCTGGTACGCCGCACCCTCAGATGTCGTCCTGTTTTTTGGTCGCCATGAAGGATGACTC 885244 Query 19285 CATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGG 19344 ||| ||||| |||||||| || | || ||||| || || |||||| |||| || Sbjct 885245 CATCGAGGGTATCTACGATACTTTGAAAGAGTGTGCAATGATTTCCAAGACTGCCGGCGG 885304 Query 19345 TATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACG 19403 |||||| | ||| | | | || ||| |||||| || | ||| || || |||| Sbjct 885305 TATCGGATTGCACATTCAC-AACATCAGGTCGACGGGATCCTACATCGCCGGTACCAACG 885363 Query 19404 GAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCA 19463 | | || | || | | || ||| | || || || |||||||| || | || ||| Sbjct 885364 GTACATCCAATGGATTGATTCCTATGATTCGTGTTTTTAACAACACTGCTCGCTATGTCG 885423 Query 19464 ACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGG 19523 | || || || |||| | || | || ||||| || | |||||||||||| | | Sbjct 885424 ATCAAGGTGGTAACAAAAGACCTGGTGCTTTTGCCATTTATTTGGAGCCATGGCACTCCG 885483 Query 19524 ACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTCGCG 19583 | | | || || | || | || ||| || ||| | || || || || || | Sbjct 885484 ATATTTTTGACTTTATAGATATCCGGAAGAATCACGGTAAAGAAGAAATCCGTGCCCGGG 885543 Query 19584 ACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACGAAG 19643 | || ||| | || || |||||||| || || || ||| | | ||| ||| || ||| || Sbjct 885544 ATCTTTTCCCTGCATTATGGATTCCAGATCTTTTTATGAAAAGGGTCGAGGAGAACGGAG 885603 Query 19644 AATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGGCGT 19703 | ||| || | | || ||| || || | | ||||| || ||||| | || Sbjct 885604 ACTGGACTTTGTTTTCTCCAAGCGAGGCGCCAGGATTGGCGGACGTTTATGGCGATGAGT 885663 Query 19704 TCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGGGCCC 19763 || | || || | |||||| |||| || | ||| || ||| | Sbjct 885664 TCGTGGCTTTATATGAGCGTTACGTTCAAGAGGGTCGCGGTAGAAAGACCATCAAGGCTC 885723 Query 19764 GGGACGTCTGGGACCGCGTCCTCAAAAGC-CAGGTCGAGACCGGCACACCGTACATGTGC 19822 | | | ||| | ||| || | |||| ||| || || || || || | |||| Sbjct 885724 AGAAACTGTGGTA-CGCTATCTTAGAAGCACAGACTGAAACTGGTACTCCTTTCATGCTT 885782 Query 19823 TACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCC 19882 || || ||||| ||| || || || || ||||| | || | ||||| || ||| Sbjct 885783 TATAAAGACGCATGCAACAGAAAATCTAACCAAAAGAATTTAGGTGTCATCAAATCTTCC 885842 Query 19883 AACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTG 19942 ||| |||| ||| || | ||| || | || | || ||||| || |||||||| Sbjct 885843 AACTTGTGCTGTGAGATTGTTGAGTACTCTGAACCTGGTGAAACTGCAGTCTGTAATCTT 885902 Query 19943 GCGTC----CCTGTGCCTGC------CGA--------CTTTCGTCAAGGCCTCCTCCTTC 19984 || || || |||| || ||| | || |||| | | | | Sbjct 885903 GCATCTATTTCTTTGCCAGCATTCATCGAAACATCTGATGACGGCAAGACTCAATGGTAC 885962 Query 19985 GACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATC 20044 |||||| ||| | | ||| | | ||||||||| ||| |||| | ||||| Sbjct 885963 AACTTTGAGAAACTTCATGAGATTGCAAAGGTCGTCACTTACAATTTGAACAGAATCATC 886022 Query 20045 GATCGGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATC 20104 || || |||| |||||| ||| |||| | || || |||||| | || | || || Sbjct 886023 GACCGTAACTATTACCCAGTTGAGACGGCCAGAAAATCTAATATGAGACATAGACCAATT 886082 Query 20105 GCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGAT 20164 || |||| || || || || ||||| | ||||||| | | | | | ||||| | Sbjct 886083 GCCCTCGGGGTTCAAGGTCTTGCCGATGCTTTCATGCTTTTGCGTATTCCCTTCGA--TT 886140 Query 20165 CCCAAG--GCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCC 20222 |||||| ||| ||| | |||| |||||||||| || | || ||||| | | Sbjct 886141 CCCAAGAAGCGAAGGAGTTGAACATTCACATCTTCGAGACCATTTATCACGCTGGGTTGA 886200 Query 20223 TGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCG 20282 | ||| ||||| ||| |||| || || || || || || |||||| || | Sbjct 886201 CTGCGTCGCATGAACTAGCCTTGAAGGAAGGACCCTATGAAACATTTGCGGGGTCCCCAG 886260 Query 20283 CGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAATGAGTTTTGGAGC- 20341 | || | ||||| | || ||||||||| | | | || || ||| | Sbjct 886261 CATCGCAAGGTATTTTGCAATTTGACATGTGGAACAAGAAGCCAACCGACTTGTGGGACT 886320 Query 20342 -----GCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGC 20396 | |||||||| |||| | | || | | || ||| | || | |||| Sbjct 886321 GGGATGGCCTCAAGGCCAAGATTGTCAAAGATGGTATCAGAAATTCGCTCCTGCTAGCGC 886380 Query 20397 CCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACA 20456 | ||||| || || || || | || || |||| ||||| || ||| ||||| |||| Sbjct 886381 CAATGCCAACGGCATCTACTTCGCAAATTTTGGGTAACAATGAATGTTTTGAGCCTTACA 886440 Query 20457 CGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACC 20516 | | ||||| |||| |||||| |||| ||||||||||| || || ||| || Sbjct 886441 CATCTAACATGTACTCTCGTCGTGTACTGTCCGGTGAGTTCCAGATTGTCAACCCATACT 886500 Query 20517 TGGTCCGCGA-CTTGCAGAAGATCGATATGTGGTCGCCCAA--AATTAAGAATGAAATTG 20573 || | || || |||| | | | | | | ||| | | || || ||| | | ||| Sbjct 886501 TGCTACGTGACCTTGTTG-ACCTTGGTGTATGG--GACGAAGCCATGAAGTCTCACATTA 886557 Query 20574 TCCGAGCCGGCGGGAGCGTCCAGGCATTG---GATATCCCCCAGAACCTCAAGGACATTT 20630 | | | ||| | || ||| | ||||| || | ||||| ||| | | Sbjct 886558 TTTCGGACAACGGTTCTATTCAAAACTTGCCAAACATCCCACAAGAGCTCAAAGACCTGT 886617 Query 20631 ACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCG 20690 ||| ||| || |||||| | | || |||| ||||| || ||||| ||||| || | | Sbjct 886618 ACAAGACGGTTTGGGAACTTTCCCAAAAGACTATCATTGAGATGGCTGCCGACCGTGCCT 886677 Query 20691 CCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGC 20750 |||||| |||||||| || || ||||| | ||| ||| | ||| || | Sbjct 886678 GCTACATTGACCAGTCGCAATCTCTCAACATTCACATCCGCGCTCCTACGATGGGTAAAC 886737 Query 20751 TGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGC 20810 ||| ||||| | || || ||| | ||||| || ||||| || |||||||| |||| Sbjct 886738 TGACAAGTATGCACTTTTATGGGTGGAAAAAGGGTCTAAAGACAGGTATGTACTACCTGC 886797 Query 20811 GGACCCGAGC 20820 |||| | ||| Sbjct 886798 GGACACAAGC 886807 >seq8 Length=1778692 Score = 114 bits (126), Expect = 1e-20 Identities = 279/415 (67%), Gaps = 7/415 (2%) Strand=Plus/Plus Query 59703 GTCCTGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTT 59762 || || || || ||||| || || || ||||||| |||||| | | ||||| Sbjct 705238 GTGCTTGCGTTTTTCGCTGCTTCGGACGGTATTGTGAACGAAAATCTCGTGGAAAACTTC 705297 Query 59763 TCCAAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAG 59822 ||| || || || ||| | |||||| | ||||||| || ||| | | ||| Sbjct 705298 TCCGCAGAAGTGCAAATTCCAGAGGCCAAATGTTTCTACGGGTTCCAGATCATGATGGAG 705357 Query 59823 TCTATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAG 59882 ||||||||||| ||||||||| | | ||||||| | ||||||| || | ||| Sbjct 705358 AACATCCACTCCGAAACGTACTCGTTGCTCATCGATACCTACATCAAGGACCCTAAGGAG 705417 Query 59883 AAGGCTGGTCTGTTCCGTGCCATAGAG-ACGTCCCCCGCAGTTAAACAAAAAGCAGAATG 59941 || | | ||||| ||| || ||| || |||||| | | ||| | || || ||||| Sbjct 705418 AACGAATTTTTGTTCAATGCGATTGAGAACATCCCCCAGA-TAAAAGAGAAGGCCGAATG 705476 Query 59942 GGCCATGCAG-TGGA-TGAGTCC--TGGAGCATCATTTGCACAACGTCTCATAGCTTTTG 59997 ||| || ||| |||| | || | | ||| | || || |||| ||| |||| || | Sbjct 705477 GGCGAT-CAGATGGATTCAGGACGACGAAGCGTTGTTCGCGGAACGGCTCGTAGCGTTCG 705535 Query 59998 CATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGC 60057 | || ||||| | || ||||| || ||||| || ||||||||| | |||||| Sbjct 705536 CCGCTGTCGAAGGTGTGTTTTTCTCAGGTTCGTTTGCGGCCATTTTCTGGTTGAAAAAGA 705595 Query 60058 GTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGG 60112 || || ||||| || || | ||||| |||||||| |||| | | ||||| || Sbjct 705596 AGGGTCTTATGCCCGGACTCACGTTCTCGAACGAGCTTATTTGCAGAGACGAAGG 705650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524745147520