Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq5 197 2e-45 >seq5 Length=1414338 Score = 197 bits (218), Expect = 2e-45 Identities = 338/485 (70%), Gaps = 4/485 (1%) Strand=Plus/Plus Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302 ||||| ||| | ||||| || | || |||||||| ||| |||||||||| |||||| Sbjct 885126 GAGACTTACAATCTAATGTCCCTCAGATATTTTACGCATGCCTCGCCAACCCTTTTCAAC 885185 Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362 ||||||||| ||||||||||||||| ||| || |||| || |||||||||||||| Sbjct 885186 GCTGGTACGCCGCACCCTCAGATGTCGTCCTGTTTTTTGGTCGCCATGAAGGATGACTCC 885245 Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422 ||||| || |||||||| || | || |||||||| || |||||| | || ||| Sbjct 885246 ATCGAGGGTATCTACGATACTTTGAAAGAGTGTGCAATGATTTCCAAGACTGCCGGCGGT 885305 Query 53423 ATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCA-ATCAAGGGGACGAACG 53480 ||||| | ||| | | | ||| || | || |||| | | | ||| || || |||| Sbjct 885306 ATCGGATTGCACATTCAC-AACATCAGGTCG-ACGGGATCCTACATCGCCGGTACCAACG 885363 Query 53481 GCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCA 53540 | || ||||| | | |||||| | || || || |||||||| || || || ||| Sbjct 885364 GTACATCCAATGGATTGATTCCTATGATTCGTGTTTTTAACAACACTGCTCGCTATGTCG 885423 Query 53541 ACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCG 53600 | || |||||| || | || | || ||||| || | ||||| |||||| ||| Sbjct 885424 ATCAAGGTGGTAACAAAAGACCTGGTGCTTTTGCCATTTATTTGGAGCCATGGCACTCCG 885483 Query 53601 ACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTG 53660 | ||| | || ||| | || | || |||||| ||| | ||||| || || ||| | Sbjct 885484 ATATTTTTGACTTTATAGATATCCGGAAGAATCACGGTAAAGAAGAAATCCGTGCCCGGG 885543 Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720 | || || | || | |||||||| || || || ||| ||| ||| ||| || ||| | Sbjct 885544 ATCTTTTCCCTGCATTATGGATTCCAGATCTTTTTATGAAAAGGGTCGAGGAGAACGGAG 885603 Query 53721 AGTGG 53725 | ||| Sbjct 885604 ACTGG 885608 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 55727 CTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGT 55786 ||||| || | ||| |||||| ||||| || | || |||| | | ||||| ||| | Sbjct 886605 CTCAAAGACCTGTACAAGACGGTTTGGGAACTTTCCCAAAAGACTATCATTGAGATGGCT 886664 Query 55787 GCTGATCGTGG-TGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845 || || |||| ||| ||||| |||||||| || ||||| ||||| ||| ||| Sbjct 886665 GCCGACCGTGCCTGC-TACATTGACCAGTCGCAATCTCTCAACATTCACATCCGCGCTCC 886723 Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905 | | ||| || ||| ||||||||||| |||||||| ||||| || ||||| || Sbjct 886724 TACGATGGGTAAACTGACAAGTATGCACTTTTATGGGTGGAAAAAGGGTCTAAAGACAGG 886783 Query 55906 TATGTACTATCTGCGGAC 55923 ||||||||| |||||||| Sbjct 886784 TATGTACTACCTGCGGAC 886801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215945278400