Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq5 197 2e-45
>seq5
Length=1414338
Score = 197 bits (218), Expect = 2e-45
Identities = 338/485 (70%), Gaps = 4/485 (1%)
Strand=Plus/Plus
Query 53243 GAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAAC 53302
||||| ||| | ||||| || | || |||||||| ||| |||||||||| ||||||
Sbjct 885126 GAGACTTACAATCTAATGTCCCTCAGATATTTTACGCATGCCTCGCCAACCCTTTTCAAC 885185
Query 53303 GCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCG 53362
||||||||| ||||||||||||||| ||| || |||| || ||||||||||||||
Sbjct 885186 GCTGGTACGCCGCACCCTCAGATGTCGTCCTGTTTTTTGGTCGCCATGAAGGATGACTCC 885245
Query 53363 ATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGT 53422
||||| || |||||||| || | || |||||||| || |||||| | || |||
Sbjct 885246 ATCGAGGGTATCTACGATACTTTGAAAGAGTGTGCAATGATTTCCAAGACTGCCGGCGGT 885305
Query 53423 ATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCA-ATCAAGGGGACGAACG 53480
||||| | ||| | | | ||| || | || |||| | | | ||| || || ||||
Sbjct 885306 ATCGGATTGCACATTCAC-AACATCAGGTCG-ACGGGATCCTACATCGCCGGTACCAACG 885363
Query 53481 GCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCA 53540
| || ||||| | | |||||| | || || || |||||||| || || || |||
Sbjct 885364 GTACATCCAATGGATTGATTCCTATGATTCGTGTTTTTAACAACACTGCTCGCTATGTCG 885423
Query 53541 ACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCG 53600
| || |||||| || | || | || ||||| || | ||||| |||||| |||
Sbjct 885424 ATCAAGGTGGTAACAAAAGACCTGGTGCTTTTGCCATTTATTTGGAGCCATGGCACTCCG 885483
Query 53601 ACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTG 53660
| ||| | || ||| | || | || |||||| ||| | ||||| || || ||| |
Sbjct 885484 ATATTTTTGACTTTATAGATATCCGGAAGAATCACGGTAAAGAAGAAATCCGTGCCCGGG 885543
Query 53661 ACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG 53720
| || || | || | |||||||| || || || ||| ||| ||| ||| || ||| |
Sbjct 885544 ATCTTTTCCCTGCATTATGGATTCCAGATCTTTTTATGAAAAGGGTCGAGGAGAACGGAG 885603
Query 53721 AGTGG 53725
| |||
Sbjct 885604 ACTGG 885608
Score = 107 bits (118), Expect = 2e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 55727 CTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGT 55786
||||| || | ||| |||||| ||||| || | || |||| | | ||||| ||| |
Sbjct 886605 CTCAAAGACCTGTACAAGACGGTTTGGGAACTTTCCCAAAAGACTATCATTGAGATGGCT 886664
Query 55787 GCTGATCGTGG-TGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCC 55845
|| || |||| ||| ||||| |||||||| || ||||| ||||| ||| |||
Sbjct 886665 GCCGACCGTGCCTGC-TACATTGACCAGTCGCAATCTCTCAACATTCACATCCGCGCTCC 886723
Query 55846 TTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGG 55905
| | ||| || ||| ||||||||||| |||||||| ||||| || ||||| ||
Sbjct 886724 TACGATGGGTAAACTGACAAGTATGCACTTTTATGGGTGGAAAAAGGGTCTAAAGACAGG 886783
Query 55906 TATGTACTATCTGCGGAC 55923
||||||||| ||||||||
Sbjct 886784 TATGTACTACCTGCGGAC 886801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215945278400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |