Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq6 150 2e-31
seq8 127 2e-24
seq5 95.1 1e-14
>seq6
Length=1501435
Score = 150 bits (166), Expect = 2e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || |||||||| || ||||| || ||||| |||||||| |||||||| ||
Sbjct 435265 AATGCAGATTTTTGTCAAAACCCTTACGGGAAAGACGATTACTCTCGAGGTTGAATCCTC 435206
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||| | ||| ||||| | || ||||||||||| ||||| || |||||||||||
Sbjct 435205 TGACACCATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCA 435146
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|| | | ||||| ||||| || || | || |||| | | ||| | | || || ||
Sbjct 435145 ACAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAA 435086
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||| ||||| ||| | || ||||||||||||| | |||||
Sbjct 435085 CATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGAGAGGTGG 435038
Score = 134 bits (148), Expect = 2e-26
Identities = 170/234 (73%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || || || ||||| |||||||| |||||||| ||
Sbjct 434267 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434208
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| ||||| | || ||||||||||| ||||| || |||||||||||
Sbjct 434207 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434148
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | ||||| ||||| || || | || |||| | | ||| | | || || ||
Sbjct 434147 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434088
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTT 27639
| ||||| ||||| ||||| || ||||||||||| | | || || |||||
Sbjct 434087 ATTCAAAAAGAATCAACTCTGCACTTAGTCTTGCGTTTGAGAGGAGGTTAAGTT 434034
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || || || ||||| |||||||| |||||||| ||
Sbjct 435036 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434977
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || | ||| ||||| | || ||||||||||| ||||| || |||||||||||
Sbjct 434976 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434917
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | ||||| ||||| || || | || |||| | | ||| | | || || ||
Sbjct 434916 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434857
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| ||||| ||||| ||| | || ||||||||||| | | |||||
Sbjct 434856 ATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTTTGAGAGGTGG 434810
Score = 104 bits (114), Expect = 3e-17
Identities = 116/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
||| ||||| | || ||||||||||||||||| || ||||| || |||||| | || ||
Sbjct 434423 AATGTGAAGTCCAAGATTCAGGACAAGGAGGGTATCCCTCCGGATCAGCAGAGGCTTATC 434364
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
|||||||| ||||| | || |||| | | || | | || || || | ||||| |||
Sbjct 434363 TTTGCTGGCAAGCAGTTAGAAGATGGTAGAACATTGTCTGATTACAACATTCAAAAAGAA 434304
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | || ||||||||||||| | |||||
Sbjct 434303 TCAACTTTGCACTTAGTCTTGCGTCTGAGAGGTGG 434269
Score = 89.7 bits (98), Expect = 6e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || || || ||||| |||||||| |||||||| || |
Sbjct 434808 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACAATTACTCTCGAGGTTGAATCCTCT 434749
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509
|| | ||| | ||| ||||| | || |||||||||||||||||
Sbjct 434748 GACACCATCGATAATGTGAAGTCCAAGATTCAGGACAAGGAGGG 434705
>seq8
Length=1778692
Score = 127 bits (140), Expect = 2e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||||||||| ||||| || |||||||| || | |||||||| || |
Sbjct 1641294 ATGCAGATTTTTGTCAAGACCCTTACGGGTAAGACTATCACCTTAGAGGTTGAATCTTCT 1641353
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| | || || ||||||||||| || || || || ||||||
Sbjct 1641354 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATCCCACCTGACCAG 1641413
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | | || || |||||||||||| | || |||| | || | | ||||| ||
Sbjct 1641414 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGTCCGACTACAAC 1641473
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
| |||||||||||||| || || | ||||||
Sbjct 1641474 ATTCAAAAGGAATCCACCCTGCACTTGGTCTTG 1641506
Score = 120 bits (132), Expect = 3e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
||||||||||| | || || ||||| || ||| | || || || || || | ||||
Sbjct 71206 TTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATT 71265
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || || ||||||||||| || |||||||| ||||| || | |
Sbjct 71266 GACAATGTCAAGTCGAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTG 71325
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| ||||||||||||||| | || |||| | || | | ||||| || ||||||||
Sbjct 71326 ATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTACAACATCCAAAAG 71385
Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618
|| ||||||||||| | ||||||
Sbjct 71386 GAGTCCACTCTTCACTTGGTCTTG 71409
>seq5
Length=1414338
Score = 95.1 bits (104), Expect = 1e-14
Identities = 765/1227 (62%), Gaps = 45/1227 (4%)
Strand=Plus/Minus
Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGG 80600
||||||||| ||||| || || | ||| || || |||||||| || || || || ||
Sbjct 886292 CCACATGTCAAATTGCAAAATACCTTGCGATGCTGGGGACCCCGCAAATGTTTCATAGGG 886233
Query 80601 GCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAA 80660
|| ||| || ||| || ||| |||| | | | | |||||||||||| ||| ||
Sbjct 886232 TCCTTCCTTCAAGGCTAGTTCATGCGACGCAGTCAACCCAGCGTGATAAATGGTCTCGAA 886173
Query 80661 GACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAA 80720
|| | |||||| | ||| | | || ||||| | | | || | ||||||
Sbjct 886172 GATGTGAATGTTCAACTCCTTCGCTTCTTGGGAATCGAAGGGAATACGCAAAAGCATGAA 886113
Query 80721 CACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTC 80780
| || || || || ||||| |||| ||| || || | || | | | || |||
Sbjct 886112 AGCATCGGCAAGACCTTGAACCCCGAGGGCAATTGGTCTATGTCTCATATTAGATTTTCT 886053
Query 80781 GGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAAC 80840
|||| | || ||||||| ||||| ||||||| | ||||| ||| || || ||
Sbjct 886052 GGCCGTCTCAACTGGGTAATAGTTACGGTCGATGATTCTGTTCAAATTGTAAGTGACGAC 885993
Query 80841 CCGTGTAACATCATGAAGTTTCTGAAAGTCG---AATTG-GT-TCCCCTTCA-CAAATG- 80893
| || || ||||||||||||| ||||| | |||| || | || ||| || |||
Sbjct 885992 CTTTGCAATCTCATGAAGTTTCTCAAAGTTGTACCATTGAGTCTTGCCGTCATCAGATGT 885933
Query 80894 -CCG--GAAGGCT--------CAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATC 80942
|| ||| ||| | || || ||||| || || || || ||| ||
Sbjct 885932 TTCGATGAATGCTGGCAAAGAAATAGATGCAAGATTACAGACTGCAGTTTCACCAGGTTC 885873
Query 80943 TGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTG 81002
| |||| || || || |||||| || ||||| || || ||| | || || ||
Sbjct 885872 AGAGTACTCAACAATCTCACAGCACAAGTTGGAAGATTTGATGACACCTAAATTCTTTTG 885813
Query 81003 GTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTG 81062
||| || || |||||| ||||| || || |||| | || ||||| || || |||
Sbjct 885812 GTTAGATTTTCTGTTGCATGCGTCTTTATAAAGCATGAAAGGAGTACCAGTTTCAGTCTG 885753
Query 81063 TGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTC 81122
|| | | ||| |||| ||| | | | ||||||| || ||| || |
Sbjct 885752 TGCTTCTAAGATAGCGTACCACAGTTTCTGAGCCTTGA--------TGGTCTTT--CTAC 885703
Query 81123 GGCCACATACTTG-GCGTAA-GCT--------TCGTCGAACTTGGCACCGTGAAGTTCAG 81172
|| || |||| ||||| ||| | |||||| | || | || || |
Sbjct 885702 CGCGACCCTCTTGAACGTAACGCTCATATAAAGCCACGAACTCATCGCCATAAACGTCCG 885643
Query 81173 TGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCT 81232
| |||| |||| | || | | || |||||| || | ||| || |
Sbjct 885642 CCAATCCTGGCGCCTCGCTTGGAGAAAACAAAGTCCAGTCTCCGTTCTCCTCGACCCTTT 885583
Query 81233 TCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCAT 81292
|||| ||| || || ||||| | || | ||| || || ||| || || || |
Sbjct 885582 TCATAAAAAGATCTGGAATCCATAATGCAGGGAAAAGATCCCGGGCACGGATTTCTTCTT 885523
Query 81293 CACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGAT 81352
||| || || || | || | |||||| | || || | ||||||||||||| ||
Sbjct 885522 TACCGTGATTCTTCCGGATATCTATAAAGTCAAAAATATCGGAGTGCCATGGCTCCAAAT 885463
Query 81353 ACACGGCGATCG-ACC---CCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCG 81408
| | ||| | | ||| ||| | ||||| || | ||| || || ||||| |
Sbjct 885462 AAATGGCAAAAGCACCAGGTCTTTTG-TTACCACCTTGATCGACATAGCGAGCAGTGTTG 885404
Query 81409 TTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGC 81468
||||| ||||| | |||||| || | |||| || |||||| ||||| ||||
Sbjct 885403 TTAAAAACACGAATCATAGGAATCAATCCATTGGATGTACCGTTGGTACCGGCGATGTAG 885344
Query 81469 GACCCCTTGGCGCGCACCTTGCTGATTG-AAAGACCGATGCCACCTGACCACTTTGAAAT 81527
|| ||| | | | | ||| ||| || | ||||| || || | ||| |||||
Sbjct 885343 GATCCCGTCGACCTGATGTTG-TGAATGTGCAATCCGATACCGCCGGCAGTCTTGGAAAT 885285
Query 81528 CTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAG 81587
| |||||| |||| || || || || ||||||||| || | |||||| | |
Sbjct 885284 CATTGCACACTCTTTCAAAGTATCGTAGATACCCTCGATGGAGTCATCCTTCATGGCGAC 885225
Query 81588 CAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGC 81647
||| |||||| |||||||||||| | || || ||||| || ||||| | ||
Sbjct 885224 CAAAAAACAGGACGACATCTGAGGGTGCGGCGTACCAGCGTTGAAAAGGGTTGGCGAGGC 885165
Query 81648 GTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTC 81707
|| | ||||| | | ||||| || | || || || | || | ||||| |
Sbjct 885164 ATGCGTAAAATATCTGAGGGACATTAGATTGTAAGTCTCGATCACCTTTTCAATATTGGT 885105
Query 81708 ACCGTGAATACCGATAGCTACACGCAT 81734
||||| || |||| || ||||||||
Sbjct 885104 TCCGTGTATGCCGACGGCAACACGCAT 885078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310342968960
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