Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq6 150 2e-31 seq8 127 2e-24 seq5 95.1 1e-14 >seq6 Length=1501435 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || |||||||| || ||||| || ||||| |||||||| |||||||| || Sbjct 435265 AATGCAGATTTTTGTCAAAACCCTTACGGGAAAGACGATTACTCTCGAGGTTGAATCCTC 435206 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | ||| | ||| ||||| | || ||||||||||| ||||| || ||||||||||| Sbjct 435205 TGACACCATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCA 435146 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | | ||||| ||||| || || | || |||| | | ||| | | || || || Sbjct 435145 ACAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAA 435086 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| ||||| ||| | || ||||||||||||| | ||||| Sbjct 435085 CATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGAGAGGTGG 435038 Score = 134 bits (148), Expect = 2e-26 Identities = 170/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || || ||||| |||||||| |||||||| || Sbjct 434267 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434208 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||| | || ||||||||||| ||||| || ||||||||||| Sbjct 434207 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434148 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | ||||| ||||| || || | || |||| | | ||| | | || || || Sbjct 434147 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434088 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTT 27639 | ||||| ||||| ||||| || ||||||||||| | | || || ||||| Sbjct 434087 ATTCAAAAAGAATCAACTCTGCACTTAGTCTTGCGTTTGAGAGGAGGTTAAGTT 434034 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || || ||||| |||||||| |||||||| || Sbjct 435036 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCC 434977 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| ||||| | || ||||||||||| ||||| || ||||||||||| Sbjct 434976 GACACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAA 434917 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | ||||| ||||| || || | || |||| | | ||| | | || || || Sbjct 434916 CAAAGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAACCTTGTCGGATTACAAC 434857 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||| ||||| ||| | || ||||||||||| | | ||||| Sbjct 434856 ATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTTTGAGAGGTGG 434810 Score = 104 bits (114), Expect = 3e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| ||||| | || ||||||||||||||||| || ||||| || |||||| | || || Sbjct 434423 AATGTGAAGTCCAAGATTCAGGACAAGGAGGGTATCCCTCCGGATCAGCAGAGGCTTATC 434364 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 |||||||| ||||| | || |||| | | || | | || || || | ||||| ||| Sbjct 434363 TTTGCTGGCAAGCAGTTAGAAGATGGTAGAACATTGTCTGATTACAACATTCAAAAAGAA 434304 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || ||||||||||||| | ||||| Sbjct 434303 TCAACTTTGCACTTAGTCTTGCGTCTGAGAGGTGG 434269 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || || || ||||| |||||||| |||||||| || | Sbjct 434808 ATGCAGATTTTCGTCAAGACCCTCACGGGAAAGACAATTACTCTCGAGGTTGAATCCTCT 434749 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||| | ||| ||||| | || ||||||||||||||||| Sbjct 434748 GACACCATCGATAATGTGAAGTCCAAGATTCAGGACAAGGAGGG 434705 >seq8 Length=1778692 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||||||||| ||||| || |||||||| || | |||||||| || | Sbjct 1641294 ATGCAGATTTTTGTCAAGACCCTTACGGGTAAGACTATCACCTTAGAGGTTGAATCTTCT 1641353 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || || ||||||||||| || || || || |||||| Sbjct 1641354 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATCCCACCTGACCAG 1641413 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || || |||||||||||| | || |||| | || | | ||||| || Sbjct 1641414 CAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGTCCGACTACAAC 1641473 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | |||||||||||||| || || | |||||| Sbjct 1641474 ATTCAAAAGGAATCCACCCTGCACTTGGTCTTG 1641506 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 ||||||||||| | || || ||||| || ||| | || || || || || | |||| Sbjct 71206 TTTGTCAAGACCTTGACTGGTAAGACCATCACTTTGGAAGTCGAATCTTCCGACACCATT 71265 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || || ||||||||||| || |||||||| ||||| || | | Sbjct 71266 GACAATGTCAAGTCGAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTG 71325 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||||||||||||| | || |||| | || | | ||||| || |||||||| Sbjct 71326 ATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTACAACATCCAAAAG 71385 Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618 || ||||||||||| | |||||| Sbjct 71386 GAGTCCACTCTTCACTTGGTCTTG 71409 >seq5 Length=1414338 Score = 95.1 bits (104), Expect = 1e-14 Identities = 765/1227 (62%), Gaps = 45/1227 (4%) Strand=Plus/Minus Query 80541 CCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGG 80600 ||||||||| ||||| || || | ||| || || |||||||| || || || || || Sbjct 886292 CCACATGTCAAATTGCAAAATACCTTGCGATGCTGGGGACCCCGCAAATGTTTCATAGGG 886233 Query 80601 GCCCTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAA 80660 || ||| || ||| || ||| |||| | | | | |||||||||||| ||| || Sbjct 886232 TCCTTCCTTCAAGGCTAGTTCATGCGACGCAGTCAACCCAGCGTGATAAATGGTCTCGAA 886173 Query 80661 GACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAA 80720 || | |||||| | ||| | | || ||||| | | | || | |||||| Sbjct 886172 GATGTGAATGTTCAACTCCTTCGCTTCTTGGGAATCGAAGGGAATACGCAAAAGCATGAA 886113 Query 80721 CACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTC 80780 | || || || || ||||| |||| ||| || || | || | | | || ||| Sbjct 886112 AGCATCGGCAAGACCTTGAACCCCGAGGGCAATTGGTCTATGTCTCATATTAGATTTTCT 886053 Query 80781 GGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAAC 80840 |||| | || ||||||| ||||| ||||||| | ||||| ||| || || || Sbjct 886052 GGCCGTCTCAACTGGGTAATAGTTACGGTCGATGATTCTGTTCAAATTGTAAGTGACGAC 885993 Query 80841 CCGTGTAACATCATGAAGTTTCTGAAAGTCG---AATTG-GT-TCCCCTTCA-CAAATG- 80893 | || || ||||||||||||| ||||| | |||| || | || ||| || ||| Sbjct 885992 CTTTGCAATCTCATGAAGTTTCTCAAAGTTGTACCATTGAGTCTTGCCGTCATCAGATGT 885933 Query 80894 -CCG--GAAGGCT--------CAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATC 80942 || ||| ||| | || || ||||| || || || || ||| || Sbjct 885932 TTCGATGAATGCTGGCAAAGAAATAGATGCAAGATTACAGACTGCAGTTTCACCAGGTTC 885873 Query 80943 TGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTG 81002 | |||| || || || |||||| || ||||| || || ||| | || || || Sbjct 885872 AGAGTACTCAACAATCTCACAGCACAAGTTGGAAGATTTGATGACACCTAAATTCTTTTG 885813 Query 81003 GTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTG 81062 ||| || || |||||| ||||| || || |||| | || ||||| || || ||| Sbjct 885812 GTTAGATTTTCTGTTGCATGCGTCTTTATAAAGCATGAAAGGAGTACCAGTTTCAGTCTG 885753 Query 81063 TGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTC 81122 || | | ||| |||| ||| | | | ||||||| || ||| || | Sbjct 885752 TGCTTCTAAGATAGCGTACCACAGTTTCTGAGCCTTGA--------TGGTCTTT--CTAC 885703 Query 81123 GGCCACATACTTG-GCGTAA-GCT--------TCGTCGAACTTGGCACCGTGAAGTTCAG 81172 || || |||| ||||| ||| | |||||| | || | || || | Sbjct 885702 CGCGACCCTCTTGAACGTAACGCTCATATAAAGCCACGAACTCATCGCCATAAACGTCCG 885643 Query 81173 TGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCT 81232 | |||| |||| | || | | || |||||| || | ||| || | Sbjct 885642 CCAATCCTGGCGCCTCGCTTGGAGAAAACAAAGTCCAGTCTCCGTTCTCCTCGACCCTTT 885583 Query 81233 TCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCAT 81292 |||| ||| || || ||||| | || | ||| || || ||| || || || | Sbjct 885582 TCATAAAAAGATCTGGAATCCATAATGCAGGGAAAAGATCCCGGGCACGGATTTCTTCTT 885523 Query 81293 CACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGAT 81352 ||| || || || | || | |||||| | || || | ||||||||||||| || Sbjct 885522 TACCGTGATTCTTCCGGATATCTATAAAGTCAAAAATATCGGAGTGCCATGGCTCCAAAT 885463 Query 81353 ACACGGCGATCG-ACC---CCTTGCGACGGCCACCCTGGTTGACGTAACGGGCAGTCGCG 81408 | | ||| | | ||| ||| | ||||| || | ||| || || ||||| | Sbjct 885462 AAATGGCAAAAGCACCAGGTCTTTTG-TTACCACCTTGATCGACATAGCGAGCAGTGTTG 885404 Query 81409 TTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGC 81468 ||||| ||||| | |||||| || | |||| || |||||| ||||| |||| Sbjct 885403 TTAAAAACACGAATCATAGGAATCAATCCATTGGATGTACCGTTGGTACCGGCGATGTAG 885344 Query 81469 GACCCCTTGGCGCGCACCTTGCTGATTG-AAAGACCGATGCCACCTGACCACTTTGAAAT 81527 || ||| | | | | ||| ||| || | ||||| || || | ||| ||||| Sbjct 885343 GATCCCGTCGACCTGATGTTG-TGAATGTGCAATCCGATACCGCCGGCAGTCTTGGAAAT 885285 Query 81528 CTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAG 81587 | |||||| |||| || || || || ||||||||| || | |||||| | | Sbjct 885284 CATTGCACACTCTTTCAAAGTATCGTAGATACCCTCGATGGAGTCATCCTTCATGGCGAC 885225 Query 81588 CAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGC 81647 ||| |||||| |||||||||||| | || || ||||| || ||||| | || Sbjct 885224 CAAAAAACAGGACGACATCTGAGGGTGCGGCGTACCAGCGTTGAAAAGGGTTGGCGAGGC 885165 Query 81648 GTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGGAATATCGTC 81707 || | ||||| | | ||||| || | || || || | || | ||||| | Sbjct 885164 ATGCGTAAAATATCTGAGGGACATTAGATTGTAAGTCTCGATCACCTTTTCAATATTGGT 885105 Query 81708 ACCGTGAATACCGATAGCTACACGCAT 81734 ||||| || |||| || |||||||| Sbjct 885104 TCCGTGTATGCCGACGGCAACACGCAT 885078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310342968960