Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq6 188 2e-42
seq8 165 2e-35
>seq6
Length=1501435
Score = 188 bits (208), Expect = 2e-42
Identities = 169/212 (80%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
||| | ||| | ||| || |||||||| ||||| ||||||| | ||| || ||||||||
Sbjct 435055 GACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTC 435114
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024
|| ||| ||||| ||||| || | | ||||||||| ||||| | || || ||||||||
Sbjct 435115 CAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTG 435174
Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084
||||| ||||| || ||||||||||||||| ||||||||||||||| ||||||||
Sbjct 435175 AATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACCTCGAGAGTAATCGTCTT 435234
Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCATTT 211116
|||||| || || || ||||| | ||||||||
Sbjct 435235 TCCCGTAAGGGTTTTGACAAAAATCTGCATTT 435266
Score = 181 bits (200), Expect = 2e-40
Identities = 166/210 (79%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
||| | ||| ||||| || |||||||| ||||| ||||||| | ||| || ||||||||
Sbjct 434058 GACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTC 434117
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024
|| ||| ||||| ||||| || | | ||||||||| ||||| | || || ||||||||
Sbjct 434118 CAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTG 434177
Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084
||||| ||||| || ||||| ||||| || ||||||||||||||| ||||||||
Sbjct 434178 AATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGTCTT 434237
Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||||||| ||||| || || | ||||||
Sbjct 434238 TCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267
Score = 176 bits (194), Expect = 1e-38
Identities = 165/210 (79%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
||| | ||| | ||| || |||||||| ||||| ||||||| | ||| || ||||||||
Sbjct 434827 GACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTC 434886
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024
|| ||| ||||| ||||| || | | ||||||||| ||||| | || || ||||||||
Sbjct 434887 CAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTG 434946
Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTT 211084
||||| ||||| || ||||| ||||| || ||||||||||||||| ||||||||
Sbjct 434947 AATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGTCTT 435006
Query 211085 TCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||||||| ||||| || || | ||||||
Sbjct 435007 TCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036
Score = 111 bits (122), Expect = 4e-19
Identities = 87/104 (84%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070
|| ||||||||||| ||||| ||||| || ||||||||||||||| ||||||||||
Sbjct 434705 CCCTCCTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACCTCG 434764
Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || |||||||||||||| ||||| || || | ||||||
Sbjct 434765 AGAGTAATTGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434808
Score = 104 bits (114), Expect = 5e-17
Identities = 122/165 (74%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964
||| | ||| | ||| || |||||||| ||||| ||||| | | || || ||||||||
Sbjct 434286 GACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCAGACAATGTTCTACCATCTTC 434345
Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTG 211024
| ||||||||| || |||||||| | || || || ||||| | || |||||||||||
Sbjct 434346 TAACTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATACCCTCCTTGTCCTG 434405
Query 211025 GATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069
||||| ||||| || ||||| |||| || || ||||||
Sbjct 434406 AATCTTGGACTTCACATTATCGATAATGTCGAAGATTCAAACCTC 434450
>seq8
Length=1778692
Score = 165 bits (182), Expect = 2e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| || ||||| || ||||| ||||| || || | | || |||||
Sbjct 1641509 TCTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTTCC 1641450
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||||| || |||||||| | | ||| |||||||| || | ||||||||
Sbjct 1641449 ATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGGATACCTTCCTT 1641390
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|||||||||||| || || || |||||||||||||| ||||||||| | |||||
Sbjct 1641389 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAAGATTCAACCTCTAAGGTGAT 1641330
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || ||||| ||||| | ||||||
Sbjct 1641329 AGTCTTACCCGTAAGGGTCTTGACAAAAATCTGCAT 1641294
Score = 158 bits (174), Expect = 3e-33
Identities = 159/207 (77%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||||||||||||||| ||||||||||| || || | | || || ||
Sbjct 71412 TCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 71353
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||||| || || ||||| | | ||||||||||||||||| ||||||||
Sbjct 71352 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTT 71293
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|||||||||||| || || || || |||||||| || ||| || || | ||||||
Sbjct 71292 GTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 71233
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | ||||| |||||
Sbjct 71232 GGTCTTACCAGTCAAGGTCTTGACAAA 71206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151881186920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |