Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq8 170 5e-37
seq6 154 4e-32
>seq8
Length=1778692
Score = 170 bits (188), Expect = 5e-37
Identities = 153/192 (80%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| || |||||||| ||||| | ||||| |||| ||||||||| ||
Sbjct 1641509 TCTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTTCC 1641450
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| ||||||||||| | || ||| ||||| || || |||||||||||
Sbjct 1641449 ATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGGATACCTTCCTT 1641390
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||| |||||||| ||| ||| ||||||||||| || | ||| || ||||| |||||
Sbjct 1641389 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAAGATTCAACCTCTAAGGTGAT 1641330
Query 225678 CGTCTTGCCCGT 225689
||||| |||||
Sbjct 1641329 AGTCTTACCCGT 1641318
Score = 168 bits (186), Expect = 2e-36
Identities = 158/201 (79%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| |||||||| || ||||||| ||||| || | ||||||||| ||
Sbjct 71412 TCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 71353
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| ||||| ||||| | || ||||||||| || ||||||||||||||
Sbjct 71352 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTT 71293
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||| |||||||| ||| ||| || |||||||| || | ||| || || || |||||
Sbjct 71292 GTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 71233
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
||||| || ||||| || ||
Sbjct 71232 GGTCTTACCAGTCAAGGTCTT 71212
>seq6
Length=1501435
Score = 154 bits (170), Expect = 4e-32
Identities = 163/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|| ||| | ||| | ||| ||||||||||| | |||||||| | ||| ||||| |||||
Sbjct 435052 CAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATC 435111
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| | ||| || |||||||| || | || ||||||||| || || ||||| || |||||
Sbjct 435112 TTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTC 435171
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|| ||||| ||||||| ||||||||||| |||| ||| || || | || |||||
Sbjct 435172 CTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACCTCGAGAGTAATCGT 435231
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTT 225715
||| ||||| | ||||| | || | |||||||
Sbjct 435232 CTTTCCCGTAAGGGTTTTGACAAAAATCTGCATTT 435266
Score = 145 bits (160), Expect = 2e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|| ||| | ||| ||||| ||||||||||| | |||||||| | ||| ||||| |||||
Sbjct 434055 CAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATC 434114
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| | ||| || |||||||| || | || ||||||||| || || ||||| || |||||
Sbjct 434115 TTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTC 434174
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|| ||||| ||||||| ||||| ||||| || | ||| || || | || |||||
Sbjct 434175 CTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGT 434234
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| ||||| | || || | ||| | |||||
Sbjct 434235 CTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|| ||| | ||| | ||| ||||||||||| | |||||||| | ||| ||||| |||||
Sbjct 434824 CAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATC 434883
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| | ||| || |||||||| || | || ||||||||| || || ||||| || |||||
Sbjct 434884 TTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTC 434943
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
|| ||||| ||||||| ||||| ||||| || | ||| || || | || |||||
Sbjct 434944 CTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGT 435003
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| ||||| | || || | ||| | |||||
Sbjct 435004 CTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036
Score = 118 bits (130), Expect = 3e-21
Identities = 118/153 (77%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|| ||| | ||| | ||| ||||||||||| | |||||||| | ||| ||||| |||||
Sbjct 434283 CAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCAGACAATGTTCTACCATC 434342
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||||| |||||| ||||| |||||||| | || || || || || ||||| ||||||||
Sbjct 434343 TTCTAACTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATACCCTCCTTGTC 434402
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTC 225653
|| ||||| ||||||| ||||| ||||
Sbjct 434403 CTGAATCTTGGACTTCACATTATCGATAATGTC 434435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192531077765552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |