Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq8 170 5e-37 seq6 154 4e-32 >seq8 Length=1778692 Score = 170 bits (188), Expect = 5e-37 Identities = 153/192 (80%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| || |||||||| ||||| | ||||| |||| ||||||||| || Sbjct 1641509 TCTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTTCC 1641450 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | ||||| ||||||||||| | || ||| ||||| || || ||||||||||| Sbjct 1641449 ATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGGATACCTTCCTT 1641390 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| |||||||| ||| ||| ||||||||||| || | ||| || ||||| ||||| Sbjct 1641389 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCAGAAGATTCAACCTCTAAGGTGAT 1641330 Query 225678 CGTCTTGCCCGT 225689 ||||| ||||| Sbjct 1641329 AGTCTTACCCGT 1641318 Score = 168 bits (186), Expect = 2e-36 Identities = 158/201 (79%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | ||| |||||||| || ||||||| ||||| || | ||||||||| || Sbjct 71412 TCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 71353 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | ||||| ||||| ||||| | || ||||||||| || |||||||||||||| Sbjct 71352 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTT 71293 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 ||| |||||||| ||| ||| || |||||||| || | ||| || || || ||||| Sbjct 71292 GTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGAT 71233 Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698 ||||| || ||||| || || Sbjct 71232 GGTCTTACCAGTCAAGGTCTT 71212 >seq6 Length=1501435 Score = 154 bits (170), Expect = 4e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 || ||| | ||| | ||| ||||||||||| | |||||||| | ||| ||||| ||||| Sbjct 435052 CAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATC 435111 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| | ||| || |||||||| || | || ||||||||| || || ||||| || ||||| Sbjct 435112 TTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTC 435171 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 || ||||| ||||||| ||||||||||| |||| ||| || || | || ||||| Sbjct 435172 CTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACCTCGAGAGTAATCGT 435231 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTT 225715 ||| ||||| | ||||| | || | ||||||| Sbjct 435232 CTTTCCCGTAAGGGTTTTGACAAAAATCTGCATTT 435266 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 || ||| | ||| ||||| ||||||||||| | |||||||| | ||| ||||| ||||| Sbjct 434055 CAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATC 434114 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| | ||| || |||||||| || | || ||||||||| || || ||||| || ||||| Sbjct 434115 TTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTC 434174 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 || ||||| ||||||| ||||| ||||| || | ||| || || | || ||||| Sbjct 434175 CTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGT 434234 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| ||||| | || || | ||| | ||||| Sbjct 434235 CTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 || ||| | ||| | ||| ||||||||||| | |||||||| | ||| ||||| ||||| Sbjct 434824 CAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATC 434883 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| | ||| || |||||||| || | || ||||||||| || || ||||| || ||||| Sbjct 434884 TTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTC 434943 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 || ||||| ||||||| ||||| ||||| || | ||| || || | || ||||| Sbjct 434944 CTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGT 435003 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| ||||| | || || | ||| | ||||| Sbjct 435004 CTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036 Score = 118 bits (130), Expect = 3e-21 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 || ||| | ||| | ||| ||||||||||| | |||||||| | ||| ||||| ||||| Sbjct 434283 CAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCAGACAATGTTCTACCATC 434342 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||||| |||||| ||||| |||||||| | || || || || || ||||| |||||||| Sbjct 434343 TTCTAACTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATACCCTCCTTGTC 434402 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTC 225653 || ||||| ||||||| ||||| |||| Sbjct 434403 CTGAATCTTGGACTTCACATTATCGATAATGTC 434435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192531077765552