Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq6 105 5e-18 seq8 84.2 2e-11 >seq6 Length=1501435 Score = 105 bits (116), Expect = 5e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCT 101086 || || | |||||||||||||||||||||||| |||||||| | || ||| | |||| Sbjct 435053 AAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCT 435112 Query 101087 TCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCG 101146 ||||| |||||||| || | || | |||||||||||| || | || |||||||| Sbjct 435113 TCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCC 435172 Query 101147 GCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTT 101206 ||| || ||||||| | | || || | ||| |||| ||||| || Sbjct 435173 TGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACCTCGAGAGTAATCGTC 435232 Query 101207 TTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || ||||| | ||||| | |||||| |||||| Sbjct 435233 TTTCCCGTAAGGGTTTTGACAAAAATCTGCATT 435265 Score = 98.7 bits (108), Expect = 8e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| ||| | || || | |||||||||||||||||||||||| |||||||| | | Sbjct 434810 CCACCTCTCAAACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434869 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| | ||||||||| |||||||| || | || | |||||||||||| || Sbjct 434870 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 434929 Query 101132 ACGCCTTCTTTGTC 101145 | || |||||||| Sbjct 434930 ATACCCTCTTTGTC 434943 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| ||| | || || | ||||| |||||||||||||||||| |||||||| | | Sbjct 434041 CCTCCTCTCAAACGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGAC 434100 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| | ||||||||| |||||||| || | || | |||||||||||| || Sbjct 434101 AAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGG 434160 Query 101132 ACGCCTTCTTTGTC 101145 | || |||||||| Sbjct 434161 ATACCCTCTTTGTC 434174 Score = 82.4 bits (90), Expect = 6e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCT 101086 || || | |||||||||||||||||||||||| |||||||| | || ||| | |||| Sbjct 434284 AAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATCAGACAATGTTCTACCATCT 434343 Query 101087 TCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTC 101124 || || || ||||| ||| | |||||||| || || || Sbjct 434344 TCTAACTGCTTGCCAGCAAAGATAAGCCTCTGCTGATC 434381 >seq8 Length=1778692 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||| || |||| ||| | ||| || || ||||| || ||||| || | | Sbjct 71423 CCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 71364 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| || |||||||||||| || || ||| | || | ||||||||||| || Sbjct 71363 AAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGA 71304 Query 101132 ACGCCTTCTTTGTC 101145 | ||||| ||||| Sbjct 71303 ATACCTTCCTTGTC 71290 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||| || |||| ||||| || ||||| |||||||| ||||| |||| | Sbjct 1641520 CCACCTCTCAATCTCAAGACCAAGTGCAGGGTGGATTCCTTTTGAATGTTGTAGTCGGAC 1641461 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| | |||||||||||| || || || | || | ||||| ||||| || Sbjct 1641460 AAAGTTCTTCCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGG 1641401 Query 101132 ACGCCTTCTTTGTC 101145 | ||||| ||||| Sbjct 1641400 ATACCTTCCTTGTC 1641387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409660760058072