Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq8 224 8e-54 >seq8 Length=1778692 Score = 224 bits (248), Expect = 8e-54 Identities = 553/831 (67%), Gaps = 11/831 (1%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 || ||||| ||||| |||| || ||||| || || || ||||| | | || || ||| Sbjct 705962 TTCTGGTAGTCGGAGACTCTTTTCTCGAAAAAGTTGGTCTTGCCGGCAAGAGAGATGTTT 705903 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGC 4376 |||||||| || || ||||| || ||||| || |||| | || || || ||| Sbjct 705902 TCCATAAAGTCGAAAGGATTGGTCACGTTGAAAACCTTTTGGCTTCCGAGCGCCACGAGC 705843 Query 4377 AATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAAT 4436 |||| |||||| |||||||| | ||||||| ||||||| || ||| || || | ||| Sbjct 705842 AATCTGTCAGCGACAAATTCCACATACTGGTTCATGAGGTCTGCGTTCATACCGAGTAAC 705783 Query 4437 CTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATA 4496 || || ||||||| | || | || ||| || || || || ||||| || Sbjct 705782 GAGACCGGCAGCGCGTCGATGAAGTATCTTTTTTCGATCTCGACAGCCTCCGTGATGATT 705723 Query 4497 TCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAACAATAAACACGCAA 4554 || | ||||| ||| || || ||| |||| ||||||| || ||||| | Sbjct 705722 CGTTCGACG--ATCTTGGGATCTGGCTTGTTTTTCAAGTGCGCAAACAACAAGCACGCGA 705665 Query 4555 AATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCA 4614 | || ||||||||||||||||||| ||| || ||||| || ||||| | |||||||| Sbjct 705664 AGTCTGTGTGCAAACCTTCGTCTCTGCAAATAAGCTCGTTCGAGAACGTGAGTCCGGGCA 705605 Query 4615 TTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTT 4674 | | ||| ||||||| | ||| || || || ||||| || || || || || | |||| Sbjct 705604 TAAGACCCTTCTTTTTCAACCAGAAAATGGCCGCAAACGAACCTGAGAAAAACACACCTT 705545 Query 4675 CTACGGCGGCAAACGCTACTAATCGGGACCCGAACGA-GCTGGCTTTGTCTTTAATCCAT 4733 | || ||||| |||||||| | || | ||||| | ||| | | ||| | ||||||| Sbjct 705544 CGACAGCGGCGAACGCTACGAGCCGTTCCGCGAACAACGCT-TCGTCGTCCTGAATCCAT 705486 Query 4734 TTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTT-AAATAA 4792 | | ||||| | || || | || | || || | | || || || || || Sbjct 705485 CTGATCGCCCATTCGGCCTTCTCTTTTATCTGGGGGATGTTCTCAATCGCATTGAACAAA 705426 Query 4793 TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGA 4852 | | || | | | ||||| | || || || || || || | ||| |||| || Sbjct 705425 AATTCGTTCTCCTTA-GGGTCCTTGATGTAGGTATCGATGAGCAACGAGTACGTTTCGGA 705367 Query 4853 ATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAAC 4912 || || || || || ||||| || ||||| || ||| | || |||| | ||| || Sbjct 705366 GTGGATGTTCTCCATCATGATCTGGAACCCGTAGAAACATTTGGCCTCTGGAATTTGCAC 705307 Query 4913 TTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAA 4972 ||| | || |||| || | |||||||| || |||||||| || || ||||| Sbjct 705306 TTCTGCGGAGAAGTTTTCCACGAGATTTTCGTTCACAATACCGTCCGAAGCAGCGAAAAA 705247 Query 4973 CGCCAAAACATGAGATATAAAGTACTGTTCG---TCAGGCTTAAGTTTTTTCCAGTGGGG 5029 ||| | ||| | || | ||| || | ||| || | || | || ||||||| | | Sbjct 705246 CGCAAGCACACGTGAAAGGAAGAACCGCTCGTTCTCGTTCATACGGTTGTTCCAGTCGTG 705187 Query 5030 CAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGC 5080 ||| || || | ||||| | || || | ||||| |||||||| || || Sbjct 705186 CAAGTCCTTGGACAAATCGATCTCCTCTGCCGTCCAGAACGACGCCTCTGC 705136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049558362664