Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq5 313 3e-80 >seq5 Length=1414338 Score = 313 bits (346), Expect = 3e-80 Identities = 1322/2070 (64%), Gaps = 47/2070 (2%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 ||||||||||| | | ||||| | || ||| || || ||||||||||| || |||||| Sbjct 886831 GTAAACTGAATAGCGGCGGATGCAGCTTGTGTCCGCAGGTAGTACATACCTGTCTTTAGA 886772 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 ||| |||| || || || ||||| ||||||||||| ||||| || || Sbjct 886771 CCCTTTTTCCACCCATAAAAGTGCATACTTGTCAGTTTACCCATCGTAGGAGCGCGGATG 886712 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 ||||| || | || || || || ||| | | | || || ||||| | || Sbjct 886711 TGAATGTTGAGAGATTGCGACTGGTCAATGTAGCAGGCACGGTCGGCAGCCATCTCAATG 886652 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 || |||||||| | || |||||||| || ||| | | | ||||| || | ||| | | Sbjct 886651 ATAGTCTTTTGGGAAAGTTCCCAAACCGTCTTGTACAGGTCTTTGAGCTCTTGTGGGATG 886592 Query 77022 TTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 |||| |||||||| ||||| || || ||||| | ||| || | || | | Sbjct 886591 TTTGGCAAGTTTTGAATAGAACCGTTGTCCGAAATAATGTGAGACTTCATGGCTTCGTCC 886532 Query 77079 CACAATTTCCTCTCTGTTAAAA----CTCTAAGGAGATGAGGATTAACTATTTGAAATTC 77134 || | | | || || | | | || | | || || || || || || || Sbjct 886531 CATA----CACCAAGGTCAACAAGGTCACGTAGCAAGTATGGGTTGACAATCTGGAACTC 886476 Query 77135 TCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTT 77194 || |||| ||| | ||||| ||| || ||| || || || || | | |||||||||| Sbjct 886475 ACCGGACAGTACACGACGAGAGTACATGTTAGATGTGTAAGGCTCAAAACATTCATTGTT 886416 Query 77195 TCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAG 77254 ||||||||||| | |||||| || |||||||| || || | || | |||||||| Sbjct 886415 ACCCAAAATTTGCGAAGTAGATGCCGTTGGCATTGGCGCTAGCAGGAGCGAATTTCTGAT 886356 Query 77255 ACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAAC 77314 ||||| | | || || | || || | ||| ||||| | || | || Sbjct 886355 ACCATCTTTGACAATCTTGGCCTTGAGGCCATCCCAGTCCCACAAGTCGGTTGGCTTCTT 886296 Query 77315 ATCCCAAAGATCGTATTGTAGAATTCCGTTACTA-GCATATGATCCATTATATGTTTCAT 77373 | ||| | || |||| | ||| || || | | || || || | ||||||||| Sbjct 886295 GTTCCACATGTCAAATTGCAAAATACC-TTGCGATGCTGGGGACCCCGCAAATGTTTCAT 886237 Query 77374 AAGGTCCTTCTGTTTCA--GCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGT 77431 | |||||||| |||| ||||||||| ||| ||| | ||| |||||| || Sbjct 886236 AGGGTCCTTCC--TTCAAGGCTAGTTCATGCGACGCAGTCAACCCAGCGTGATAAATGGT 886179 Query 77432 TTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAG 77491 ||||| || | | || | || | ||||| ||| || ||| | | ||||| Sbjct 886178 CTCGAAGATGTGAATGTTCAACTCCTTCGCTTCTTGGGAATCGAAGGGAATACGCAAAAG 886119 Query 77492 AATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 77551 || || ||||| || | || ||||| || | |||| |||||||||||| |||| || Sbjct 886118 CATGAAAGCATCGGCAAGACCTTGAACCCCGAGGGCAATTGGTCTATGTCTCATATTAGA 886059 Query 77552 AATTTTAGCT-TCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAA 77610 || | || ||| | | || ||||| ||| ||| || ||| | || | ||| | Sbjct 886058 TTTTCTGGCCGTCTCAACTGGG-TAATAGTTACGGTCGATGATTCTGTTCAAATTGTAAG 886000 Query 77611 CAACTACTTTAACCACGTCCTTTAGTTTAAGAAAAT-----CA---AATCTTCC----AT 77658 || || || | | || | ||||| ||| | || | |||| | || Sbjct 885999 TGACGACCTTTGCAATCTCATGAAGTTTCTCAAAGTTGTACCATTGAGTCTTGCCGTCAT 885940 Query 77659 C---TATAACAAACA-TGTT--CAAAGCTATAGATGCTAGATTACAAACTGCTACCTCAT 77712 | | | | | | || | ||||| |||||||| |||||||| ||||| ||| Sbjct 885939 CAGATGTTTCGATGAATGCTGGCAAAGAAATAGATGCAAGATTACAGACTGCAGTTTCAC 885880 Query 77713 TAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGAT 77772 || | | || | | ||||| || | || | ||||||| || | || Sbjct 885879 CAGGTTCAGAGTACTCAACAATCTCACAGCACAAGTTGGAAGATTTGATGACACCTAAAT 885820 Query 77773 TTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTT 77832 | | |||||| ||| | ||||||| ||| |||||||| || || ||||| || |||| Sbjct 885819 TCTTTTGGTTAGATTTTCTGTTGCATGCGTCTTTATAAAGCATGAAAGGAGTACCAGTTT 885760 Query 77833 CAATCTGTGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTAT 77891 || |||||| ||| | |||| | ||| | | ||| ||| || || | ||| || Sbjct 885759 CAGTCTGTGCTTCTAAGATAGCGTACCACA-GTTTCTGAGCCTTGATGGTC--TTTCTAC 885703 Query 77892 CGCCTCTCTCTTTCATATTGAG----TATATAGCCGTTCAAATTCATCTCCCCAAACATC 77947 ||| | ||||| | | | |||| |||| | || ||||| || |||| || Sbjct 885702 CGCGACCCTCTTGAACGTAACGCTCATATAAAGCCA--CGAACTCATCGCCATAAACGTC 885645 Query 77948 ATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCG 78007 ||||||| || || |||| | | ||| | |||||| || | |||| || | Sbjct 885644 CGCCAATCCTGGCGCCTCGCTTGGAGAAAACAAAGTCCAGTCTCCGTTCTCCTCGACCCT 885585 Query 78008 TTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTC 78067 ||||||||| ||||| || ||||||| ||| || ||||| |||| | |||||| Sbjct 885584 TTTCATAAAAAGATCTGGAATCCATAATGCAGGGAAAAGATCCCGGGCACGGATTTCTTC 885525 Query 78068 ATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAG 78127 || || |||||| | ||| | ||| || | |||||| || |||||||| || | Sbjct 885524 TTTACCGTGATTCTTCCGGATATCTATAAAGTCAAAAATATCGGAGTGCCATGGCTCCAA 885465 Query 78128 ATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTT 78187 ||| || || | | | ||||||| ||| ||||| || ||||| | ||| | || ||||| Sbjct 885464 ATAAATGGCAAAAGCACCAGGTCTTTTGTTACCACCTTGATCGACATAGCGAGCAGTGTT 885405 Query 78188 ATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATA 78247 ||| |||| | | ||| ||||| | || || ||||| || || || || | || || Sbjct 885404 GTTAAAAACACGAATCATAGGAATCAATCCATTGGATGTACCGTTGGTACCGGCGATGTA 885345 Query 78248 ACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATAT 78307 ||| | | | || || |||| | || || || || || |||| || || Sbjct 885344 GGATCCCGTCGACCTGATGTTGTGAATGTGCAATCCGATACCGCCGGCAGTCTTGGAAAT 885285 Query 78308 TAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAG 78367 | || || |||||| ||||||||||||||||| || ||||||| ||||| | Sbjct 885284 CATTGCACACTCTTTCAAAGTATCGTAGATACCCTCGATGGAGTCATCCTTCATGGCGAC 885225 Query 78368 AAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGC 78427 | ||||||| ||||| ||| | || || || || || || | || || || || Sbjct 885224 CAAAAAACAGGACGACATCTGAGGGTGCGGCGTACCAGCGTTGAAAAGGGTTGGCGAGGC 885165 Query 78428 ATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCA 78487 ||||||||| || | || | ||||||||| || || || | ||| || | Sbjct 885164 ATGCGTAAAATATCTGAGGGACATTAGATTGTAAGTCTCGATCACCTTTTCAATATTGGT 885105 Query 78488 TTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATT 78547 | || || || || || |||||||| | | || || || | ||| | || | Sbjct 885104 TCCGTGTATGCCGACGGCAACACGCATGACAAGGTGTTGTGGACGTTCGGCGACCTGACC 885045 Query 78548 ATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 78607 ||| ||| |||| | ||| || |||| || || || || |||||||||||| ||| Sbjct 885044 ATTGATTCTCAATAGGTACGAGCGCTCCAGCGTCTTGAACCCGAAATAGTTGTATTGAAA 884985 Query 78608 GTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAATATCCAT 78667 |||||| ||||| | || | || || || | ||| |||| | || || || Sbjct 884984 GTCTCTGTCGTAGACGATGGCCGAGTTCAGCTCATCCTTGTGCTCTTGCACGATCTCGTA 884925 Query 78668 GACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGTTAAATAA 78727 || ||||| ||||| || | | || |||||||| || || |||| | | || Sbjct 884924 CACCTCCTGGGAAATCATAGGCGAGTGAATTCCGTTTTTAGGGTTCACGTAGTGATACAA 884865 Query 78728 ATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATACAGCTAT 78787 ||| | ||| | ||| |||| | || | |||||| | || || | || || Sbjct 884864 ATCGCTTACTACCTGGGAAAACTGTTTCGTGGTCTGCTTGTGCAAGTTGGAAATCGCGAT 884805 Query 78788 TCTTGCAGCTAGAATAGCATAATCAGGATG 78817 ||| ||||| | | | |||||||| || || Sbjct 884804 TCTCGCAGCCAAAGTGGCATAATCCGGGTG 884775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668730533120