Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq6 109 1e-18
seq8 95.1 3e-14
>seq6
Length=1501435
Score = 109 bits (120), Expect = 1e-18
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961
|| ||||| || |||||||| ||||||||||| | || ||||| |||||||| | |
Sbjct 434065 TGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTCCAACTGT 434124
Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021
|| || ||||| || | || || ||||| | | ||| || || || || ||||| ||
Sbjct 434125 TTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTGAATCTTG 434184
Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081
|| ||| | || | |||| ||| || || || |||||||| || || ||||||
Sbjct 434185 GACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGTCTTTCCCGTG 434244
Query 152082 AGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| ||||| | ||||||
Sbjct 434245 AGGGTCTTGACGAAAATCTGCAT 434267
Score = 105 bits (116), Expect = 2e-17
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966
||| || |||||||| ||||||||||| | || ||||| |||||||| | ||| ||
Sbjct 434839 AGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTCCAACTGTTTGCC 434898
Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026
||||| || | || || ||||| | | ||| || || || || ||||| || ||
Sbjct 434899 AGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTGAATCTTGGACTT 434958
Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086
||| | || | |||| ||| || || || |||||||| || || |||||||| ||
Sbjct 434959 CACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGTCTTTCCCGTGAGGGT 435018
Query 152087 CTTCACGAAGACCTGCAT 152104
||| ||||| | ||||||
Sbjct 435019 CTTGACGAAAATCTGCAT 435036
Score = 95.1 bits (104), Expect = 3e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966
||| || |||||||| ||||||||||| | || ||||| |||||||| | ||| ||
Sbjct 435067 AGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTCCAACTGTTTGCC 435126
Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026
||||| || | || || ||||| | | ||| || || || || ||||| || ||
Sbjct 435127 AGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTGAATCTTGGACTT 435186
Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086
||| | || | | |||| || || || || |||||||| || || ||||| || ||
Sbjct 435187 CACATTATCGATGGTGTCAGAGGATTCAACCTCGAGAGTAATCGTCTTTCCCGTAAGGGT 435246
Query 152087 CTTCACGAAGACCTGCATTT 152106
|| || || | ||||||||
Sbjct 435247 TTTGACAAAAATCTGCATTT 435266
Score = 93.3 bits (102), Expect = 1e-13
Identities = 89/114 (78%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966
||| || |||||||| ||||||||||| | || ||||| |||||||||| || ||
Sbjct 434298 AGTTGATTCTTTTTGAATGTTGTAATCAGACAATGTTCTACCATCTTCTAACTGCTTGCC 434357
Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
|| ||||||||||||||||| |||| | ||| || ||||| || ||||| ||
Sbjct 434358 AGCAAAGATAAGCCTCTGCTGATCCGGAGGGATACCCTCCTTGTCCTGAATCTT 434411
>seq8
Length=1778692
Score = 95.1 bits (104), Expect = 3e-14
Identities = 141/199 (71%), Gaps = 1/199 (1%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||||||| ||||| |||||||||||||| || | |||||||| |||||||| |
Sbjct 71403 CAAG-TGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCA 71345
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| || || ||||| | || || ||||| | | || |||||||| || || |
Sbjct 71344 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGGA 71285
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || |||||| | || | | |||| ||| || ||||| | ||| || || || |
Sbjct 71284 TCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTAC 71225
Query 152077 CCGTGAGAGTCTTCACGAA 152095
| || | ||||| || ||
Sbjct 71224 CAGTCAAGGTCTTGACAAA 71206
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153820681733368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |