Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq6 109 1e-18 seq8 95.1 3e-14 >seq6 Length=1501435 Score = 109 bits (120), Expect = 1e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTT 151961 || ||||| || |||||||| ||||||||||| | || ||||| |||||||| | | Sbjct 434065 TGCAGAGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTCCAACTGT 434124 Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || || ||||| || | || || ||||| | | ||| || || || || ||||| || Sbjct 434125 TTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTGAATCTTG 434184 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 || ||| | || | |||| ||| || || || |||||||| || || |||||| Sbjct 434185 GACTTCACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGTCTTTCCCGTG 434244 Query 152082 AGAGTCTTCACGAAGACCTGCAT 152104 || ||||| ||||| | |||||| Sbjct 434245 AGGGTCTTGACGAAAATCTGCAT 434267 Score = 105 bits (116), Expect = 2e-17 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966 ||| || |||||||| ||||||||||| | || ||||| |||||||| | ||| || Sbjct 434839 AGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTCCAACTGTTTGCC 434898 Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026 ||||| || | || || ||||| | | ||| || || || || ||||| || || Sbjct 434899 AGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTGAATCTTGGACTT 434958 Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086 ||| | || | |||| ||| || || || |||||||| || || |||||||| || Sbjct 434959 CACATTATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGTCTTTCCCGTGAGGGT 435018 Query 152087 CTTCACGAAGACCTGCAT 152104 ||| ||||| | |||||| Sbjct 435019 CTTGACGAAAATCTGCAT 435036 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966 ||| || |||||||| ||||||||||| | || ||||| |||||||| | ||| || Sbjct 435067 AGTTGATTCTTTTTGAATGTTGTAATCCGACAAGGTTCTACCATCTTCCAACTGTTTGCC 435126 Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTT 152026 ||||| || | || || ||||| | | ||| || || || || ||||| || || Sbjct 435127 AGCGAAAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTGAATCTTGGACTT 435186 Query 152027 GACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGT 152086 ||| | || | | |||| || || || || |||||||| || || ||||| || || Sbjct 435187 CACATTATCGATGGTGTCAGAGGATTCAACCTCGAGAGTAATCGTCTTTCCCGTAAGGGT 435246 Query 152087 CTTCACGAAGACCTGCATTT 152106 || || || | |||||||| Sbjct 435247 TTTGACAAAAATCTGCATTT 435266 Score = 93.3 bits (102), Expect = 1e-13 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 151907 AGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCC 151966 ||| || |||||||| ||||||||||| | || ||||| |||||||||| || || Sbjct 434298 AGTTGATTCTTTTTGAATGTTGTAATCAGACAATGTTCTACCATCTTCTAACTGCTTGCC 434357 Query 151967 GGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 || ||||||||||||||||| |||| | ||| || ||||| || ||||| || Sbjct 434358 AGCAAAGATAAGCCTCTGCTGATCCGGAGGGATACCCTCCTTGTCCTGAATCTT 434411 >seq8 Length=1778692 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/199 (71%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| ||||| |||||||||||||| || | |||||||| |||||||| | Sbjct 71403 CAAG-TGAAGAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCA 71345 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | || || ||||| | | || |||||||| || || | Sbjct 71344 ATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGGA 71285 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | | |||| ||| || ||||| | ||| || || || | Sbjct 71284 TCTTCGACTTGACATTGTCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTAC 71225 Query 152077 CCGTGAGAGTCTTCACGAA 152095 | || | ||||| || || Sbjct 71224 CAGTCAAGGTCTTGACAAA 71206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820681733368