Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq8 158 3e-33
seq6 147 5e-30
seq1 91.5 3e-13
>seq8
Length=1778692
Score = 158 bits (174), Expect = 3e-33
Identities = 144/182 (79%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| ||||||||||||||||||| | || | |||||| || | ||| || || ||||||
Sbjct 71387 TCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAG 71328
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
||||| | |||||||||| |||||||| |||||||| |||||||| | || || |
Sbjct 71327 ATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGGATCTTCGACTTGACATTG 71268
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| |||| ||||||||| | |||||| |||||||| ||||| ||||| ||
Sbjct 71267 TCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACA 71208
Query 283089 AA 283090
||
Sbjct 71207 AA 71206
Score = 131 bits (144), Expect = 4e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||| ||||||||||| | | || | ||||| || | ||| || || || ||
Sbjct 1641485 TTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTTCCATCTTCCAATTGCTTACCAGCGAA 1641426
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|||||| | ||| |||||| || ||||| |||||||| |||||||| | || || |
Sbjct 1641425 GATCAATCTTTGCTGGTCAGGTGGGATACCTTCCTTGTCCTGGATCTTGGACTTGACATT 1641366
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||| ||||| |||| ||| || || | ||||| ||||||||||| | ||||| ||
Sbjct 1641365 GTCGATGGTGTCAGAAGATTCAACCTCTAAGGTGATAGTCTTACCCGTAAGGGTCTTGAC 1641306
Query 283088 GAATATCTGCAT 283099
|| ||||||||
Sbjct 1641305 AAAAATCTGCAT 1641294
>seq6
Length=1501435
Score = 147 bits (162), Expect = 5e-30
Identities = 150/193 (78%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||||||||| |||||||| || | |||| || | ||||| || | ||||| || || |
Sbjct 434076 TTCTTTTTGAATGTTGTAATCCGACAAG-GTTCTACCATCTTCCAACTGTTTGCCAGCGA 434134
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026
| ||||| | ||||||||| || |||||||| ||||| || ||||| | || ||
Sbjct 434135 AAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTGAATCTTGGACTTCACAT 434194
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
||||||||||||| |||| ||| || |||||||| |||||||| ||||| | ||||| |
Sbjct 434195 TATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGA 434254
Query 283087 CGAATATCTGCAT 283099
|||| ||||||||
Sbjct 434255 CGAAAATCTGCAT 434267
Score = 147 bits (162), Expect = 5e-30
Identities = 150/193 (78%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966
||||||||| |||||||| || | |||| || | ||||| || | ||||| || || |
Sbjct 434845 TTCTTTTTGAATGTTGTAATCCGACAAG-GTTCTACCATCTTCCAACTGTTTGCCAGCGA 434903
Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026
| ||||| | ||||||||| || |||||||| ||||| || ||||| | || ||
Sbjct 434904 AAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTGAATCTTGGACTTCACAT 434963
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
||||||||||||| |||| ||| || |||||||| |||||||| ||||| | ||||| |
Sbjct 434964 TATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGA 435023
Query 283087 CGAATATCTGCAT 283099
|||| ||||||||
Sbjct 435024 CGAAAATCTGCAT 435036
Score = 93.3 bits (102), Expect = 9e-14
Identities = 84/106 (79%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 282994 TACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTT 283053
||||||||||||| || ||||| | || || ||||||| ||||| || | ||| || |
Sbjct 434703 TACCCTCCTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACCT 434762
Query 283054 CGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||||| || ||||| ||||| | ||||| ||||| ||||||||
Sbjct 434763 CGAGAGTAATTGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434808
>seq1
Length=824037
Score = 91.5 bits (100), Expect = 3e-13
Identities = 155/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 316981 CCGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTC-GTCGGGAACCCTTC 317039
||||||| ||| || ||||| || | ||| | | | | ||| || ||||| || ||
Sbjct 512899 CCGTCGATGTCGTGTTCAACGTAAACGGTTCT-ACATTCCTCTTGAGTTGGGAAACCATC 512841
Query 317040 CAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCA 317099
| |||||||| |||| || ||||||| || || || |||||||| || || || ||
Sbjct 512840 AACTTGACCGTTAGCAATGGCTCTCATCAAAGTGGATTTACCAGCACCGTTTGGACCACA 512781
Query 317100 AAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACC 317159
| ||| || | | | |||| || | || | || ||||||| | |||||| |
Sbjct 512780 CAAACCGTATCTTCTGCTTCTCTTTAGTCTCAATTGAGTCTTGTTCAACAAGATCTTAGC 512721
Query 317160 ACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
||| || |||| |||||||||||| | ||| ||||| || ||
Sbjct 512720 ACCGTAGGCCAAAGAGAACTCACAGTTACATAGGTCTTCACC 512679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046739092709232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |