Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq8 158 3e-33 seq6 147 5e-30 seq1 91.5 3e-13 >seq8 Length=1778692 Score = 158 bits (174), Expect = 3e-33 Identities = 144/182 (79%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||||||||||||||||| | || | |||||| || | ||| || || |||||| Sbjct 71387 TCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAG 71328 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | |||||||||| |||||||| |||||||| |||||||| | || || | Sbjct 71327 ATCAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTCCTGGATCTTCGACTTGACATTG 71268 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| |||| ||||||||| | |||||| |||||||| ||||| ||||| || Sbjct 71267 TCAATGGTGTCGGAAGATTCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACA 71208 Query 283089 AA 283090 || Sbjct 71207 AA 71206 Score = 131 bits (144), Expect = 4e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 ||| ||||| ||||||||||| | | || | ||||| || | ||| || || || || Sbjct 1641485 TTCCTTTTGAATGTTGTAGTCGGACAAAGTTCTTCCATCTTCCAATTGCTTACCAGCGAA 1641426 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 |||||| | ||| |||||| || ||||| |||||||| |||||||| | || || | Sbjct 1641425 GATCAATCTTTGCTGGTCAGGTGGGATACCTTCCTTGTCCTGGATCTTGGACTTGACATT 1641366 Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 ||||| ||||| |||| ||| || || | ||||| ||||||||||| | ||||| || Sbjct 1641365 GTCGATGGTGTCAGAAGATTCAACCTCTAAGGTGATAGTCTTACCCGTAAGGGTCTTGAC 1641306 Query 283088 GAATATCTGCAT 283099 || |||||||| Sbjct 1641305 AAAAATCTGCAT 1641294 >seq6 Length=1501435 Score = 147 bits (162), Expect = 5e-30 Identities = 150/193 (78%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||||||||| |||||||| || | |||| || | ||||| || | ||||| || || | Sbjct 434076 TTCTTTTTGAATGTTGTAATCCGACAAG-GTTCTACCATCTTCCAACTGTTTGCCAGCGA 434134 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 | ||||| | ||||||||| || |||||||| ||||| || ||||| | || || Sbjct 434135 AAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTGAATCTTGGACTTCACAT 434194 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 ||||||||||||| |||| ||| || |||||||| |||||||| ||||| | ||||| | Sbjct 434195 TATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGA 434254 Query 283087 CGAATATCTGCAT 283099 |||| |||||||| Sbjct 434255 CGAAAATCTGCAT 434267 Score = 147 bits (162), Expect = 5e-30 Identities = 150/193 (78%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAA 282966 ||||||||| |||||||| || | |||| || | ||||| || | ||||| || || | Sbjct 434845 TTCTTTTTGAATGTTGTAATCCGACAAG-GTTCTACCATCTTCCAACTGTTTGCCAGCGA 434903 Query 282967 AGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGG 283026 | ||||| | ||||||||| || |||||||| ||||| || ||||| | || || Sbjct 434904 AAATCAATCTTTGTTGGTCTGGAGGGATACCCTCTTTGTCCTGAATCTTGGACTTCACAT 434963 Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086 ||||||||||||| |||| ||| || |||||||| |||||||| ||||| | ||||| | Sbjct 434964 TATCGATAGTGTCGGAAGATTCAACCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGA 435023 Query 283087 CGAATATCTGCAT 283099 |||| |||||||| Sbjct 435024 CGAAAATCTGCAT 435036 Score = 93.3 bits (102), Expect = 9e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 282994 TACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTT 283053 ||||||||||||| || ||||| | || || ||||||| ||||| || | ||| || | Sbjct 434703 TACCCTCCTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACCT 434762 Query 283054 CGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||| || ||||| ||||| | ||||| ||||| |||||||| Sbjct 434763 CGAGAGTAATTGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434808 >seq1 Length=824037 Score = 91.5 bits (100), Expect = 3e-13 Identities = 155/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 316981 CCGTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTC-GTCGGGAACCCTTC 317039 ||||||| ||| || ||||| || | ||| | | | | ||| || ||||| || || Sbjct 512899 CCGTCGATGTCGTGTTCAACGTAAACGGTTCT-ACATTCCTCTTGAGTTGGGAAACCATC 512841 Query 317040 CAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCA 317099 | |||||||| |||| || ||||||| || || || |||||||| || || || || Sbjct 512840 AACTTGACCGTTAGCAATGGCTCTCATCAAAGTGGATTTACCAGCACCGTTTGGACCACA 512781 Query 317100 AAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACC 317159 | ||| || | | | |||| || | || | || ||||||| | |||||| | Sbjct 512780 CAAACCGTATCTTCTGCTTCTCTTTAGTCTCAATTGAGTCTTGTTCAACAAGATCTTAGC 512721 Query 317160 ACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 ||| || |||| |||||||||||| | ||| ||||| || || Sbjct 512720 ACCGTAGGCCAAAGAGAACTCACAGTTACATAGGTCTTCACC 512679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046739092709232