Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq8 125 5e-24
seq6 114 9e-21
>seq8
Length=1778692
Score = 125 bits (138), Expect = 5e-24
Identities = 165/224 (74%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||||| |||||| |||| |||||| ||| |||||||||||||||||| ||
Sbjct 71426 ATACCACCTCTCAATCTCAAGACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAGTCA 71367
Query 44168 G-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| | | | || | || |||| ||||| || ||||||||||| | || || || |
Sbjct 71366 GACAAAGTTCTGC-CATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGG 71308
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGAT 44284
||| | ||||||||| ||| |||||| ||| || ||| | |||||||||| |||
Sbjct 71307 AGGAATACCTTCCTTGTCCTGGATCTTCGACTTGACATTGT--CAATGGTGTCGGAAGAT 71250
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAA 44328
|| || |||| || || ||||| || || | |||||| || ||
Sbjct 71249 TCGACTTCCAAAGTGATGGTCTTACCAGTCAAGGTCTTGACAAA 71206
>seq6
Length=1501435
Score = 114 bits (126), Expect = 9e-21
Identities = 164/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||||| | ||| || | ||| || || || ||||| ||||||||||| ||
Sbjct 434041 CCTCCTCTCAAACGCAAGACTAAGTGCAGAGTTGATTCTTTTTGAATGTTGTAATC--CG 434098
Query 44171 AGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
| || || | || |||| ||| || || || || ||||| | || || |||| ||
Sbjct 434099 ACAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCTGGAG 434158
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288
| | ||| || || ||| ||||| ||||| | | || ||||||| ||||| |
Sbjct 434159 GGATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGATTCAA 434218
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| | |||||||||||||||||||||||||| ||||| || |||||
Sbjct 434219 CCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434267
Score = 113 bits (124), Expect = 3e-20
Identities = 166/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||||| | ||| || | ||| | || || ||||| |||||||||||
Sbjct 434806 CATACCACCTCTCAAACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATC 434865
Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
||| || || | || |||| ||| || || || || ||||| | || || |||
Sbjct 434866 --CGACAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCT 434923
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284
| ||| | ||| || || ||| ||||| ||||| | | || ||||||| |||
Sbjct 434924 GGAGGGATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATAGTGTCGGAAGAT 434983
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | |||||||||||||||||||||||||| ||||| || |||||
Sbjct 434984 TCAACCTCGAGAGTAATCGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 435036
Score = 109 bits (120), Expect = 4e-19
Identities = 165/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||||||| | ||| || | ||| | || || ||||| |||||||||||
Sbjct 435034 CATACCACCTCTCAGACGCAAGACTAAGTGCAAAGTTGATTCTTTTTGAATGTTGTAATC 435093
Query 44167 GGCGAGTTGGCGCT--CGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224
||| || || | || |||| ||| || || || || ||||| | || || |||
Sbjct 435094 --CGACAAGGTTCTACCATCTTCCAACTGTTTGCCAGCGAAAATCAATCTTTGTTGGTCT 435151
Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGAT 44284
| ||| | ||| || || ||| ||||| ||||| | | |||||||| | ||||
Sbjct 435152 GGAGGGATACCCTCTTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGAT 435211
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| | ||||||||||||||||| ||||| || || || || |||||
Sbjct 435212 TCAACCTCGAGAGTAATCGTCTTTCCCGTAAGGGTTTTGACAAAAATCTGCAT 435264
Score = 82.4 bits (90), Expect = 5e-11
Identities = 81/105 (77%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 44233 ACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTC 44292
||| ||||| ||| ||||| ||||| | | |||||||| | |||||| |||||
Sbjct 434704 ACCCTCCTTGTCCTGAATCTTGGACTTCACATTATCGATGGTGTCAGAGGATTCAACCTC 434763
Query 44293 CACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||||| |||||||||||||||||||| ||||| || |||||
Sbjct 434764 GAGAGTAATTGTCTTTCCCGTGAGGGTCTTGACGAAAATCTGCAT 434808
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990364900936
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |