Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25]
8 sequences; 10,117,267 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq6 168 2e-36
seq8 152 1e-31
>seq6
Length=1501435
Score = 168 bits (186), Expect = 2e-36
Identities = 171/220 (78%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || ||||| || || ||||| ||||| || |||||||| ||| ||| |||
Sbjct 435261 CAGATTTTTGTCAAAACCCTTACGGGAAAGACGATTACTCTCGAGGTTGAATCCTCTGAC 435202
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||||||||||||||||| || |||||||| ||||| |||
Sbjct 435201 ACCATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAACAA 435142
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG-ATTATAACGT 178102
|| | || ||||| || |||||| | |||||||| || || |||| || |||| ||| |
Sbjct 435141 AGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAAC-CTTGTCGGATTACAACAT 435083
Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||||||||||| |||| | || ||| | || |||
Sbjct 435082 TCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGAGA 435043
Score = 167 bits (184), Expect = 6e-36
Identities = 159/201 (79%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || ||||| ||||| ||||| || |||||||| ||| || |||
Sbjct 434264 CAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCCGAC 434205
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || ||||||||||||||||| || |||||||| ||||| |||
Sbjct 434204 ACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAACAA 434145
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG-ATTATAACGT 178102
|| | || ||||| || |||||| | |||||||| || || |||| || |||| ||| |
Sbjct 434144 AGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAAC-CTTGTCGGATTACAACAT 434086
Query 178103 CCAAAAAGAATCAACACTGCA 178123
|||||||||||||| |||||
Sbjct 434085 TCAAAAAGAATCAACTCTGCA 434065
Score = 161 bits (178), Expect = 2e-34
Identities = 158/201 (79%), Gaps = 2/201 (1%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || ||||| ||||| ||||| || |||||||| ||| || |||
Sbjct 435033 CAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCCGAC 434974
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || || || ||||||||||||||||| || |||||||| ||||| |||
Sbjct 434973 ACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAACAA 434914
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG-ATTATAACGT 178102
|| | || ||||| || |||||| | |||||||| || || |||| || |||| ||| |
Sbjct 434913 AGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAAC-CTTGTCGGATTACAACAT 434855
Query 178103 CCAAAAAGAATCAACACTGCA 178123
|||||||||||||| ||||
Sbjct 434854 TCAAAAAGAATCAACTTTGCA 434834
Score = 109 bits (120), Expect = 1e-18
Identities = 134/182 (74%), Gaps = 1/182 (1%)
Strand=Plus/Minus
Query 177962 CCTCG-AGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAG 178020
||||| |||| || || |||| ||||| || || || |||||||||||||| |
Sbjct 434455 CCTCGGAGGTTTGAATCTTCGACATTATCGATAATGTGAAGTCCAAGATTCAGGACAAGG 434396
Query 178021 AAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAA 178080
| || ||||||||||| ||||| | |||||||| || || || ||| | |||||||| |
Sbjct 434395 AGGGTATCCCTCCGGATCAGCAGAGGCTTATCTTTGCTGGCAAGCAGTTAGAAGATGGTA 434336
Query 178081 GGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCA 178140
| || | | ||||| ||| | |||||||||||||| |||| | || ||| | || |
Sbjct 434335 GAACATTGTCTGATTACAACATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGA 434276
Query 178141 GA 178142
||
Sbjct 434275 GA 434274
Score = 84.2 bits (92), Expect = 5e-11
Identities = 79/101 (78%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| || || ||||| ||||| || || || |||||||| ||| ||| |||
Sbjct 434805 CAGATTTTCGTCAAGACCCTCACGGGAAAGACAATTACTCTCGAGGTTGAATCCTCTGAC 434746
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024
|||||||| || || || |||||||||||||| || ||
Sbjct 434745 ACCATCGATAATGTGAAGTCCAAGATTCAGGACAAGGAGGG 434705
>seq8
Length=1778692
Score = 152 bits (168), Expect = 1e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || || || || || || || || |||||| | ||||| ||| || |||
Sbjct 1641297 CAGATTTTTGTCAAGACCCTTACGGGTAAGACTATCACCTTAGAGGTTGAATCTTCTGAC 1641356
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || ||||| ||||| |||||||| ||||| ||||| || |||||||||
Sbjct 1641357 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATCCCACCTGACCAGCAA 1641416
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | |||||||| || || || | ||||||||||| ||| | |||| || ||| |
Sbjct 1641417 AGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGTCCGACTACAACATT 1641476
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| ||||| || ||||| | || |||||| | |||
Sbjct 1641477 CAAAAGGAATCCACCCTGCACTTGGTCTTGAGATTGAGA 1641515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203731076617552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |