Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lachancea_20mirantina_20[genbank_20GCA_5F900074745.1_202016-10-25] 8 sequences; 10,117,267 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq6 168 2e-36 seq8 152 1e-31 >seq6 Length=1501435 Score = 168 bits (186), Expect = 2e-36 Identities = 171/220 (78%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || ||||| || || ||||| ||||| || |||||||| ||| ||| ||| Sbjct 435261 CAGATTTTTGTCAAAACCCTTACGGGAAAGACGATTACTCTCGAGGTTGAATCCTCTGAC 435202 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||||||||||||||| || |||||||| ||||| ||| Sbjct 435201 ACCATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAACAA 435142 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG-ATTATAACGT 178102 || | || ||||| || |||||| | |||||||| || || |||| || |||| ||| | Sbjct 435141 AGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAAC-CTTGTCGGATTACAACAT 435083 Query 178103 CCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||||||||||| |||| | || ||| | || ||| Sbjct 435082 TCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGAGA 435043 Score = 167 bits (184), Expect = 6e-36 Identities = 159/201 (79%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| ||||| ||||| || |||||||| ||| || ||| Sbjct 434264 CAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCCGAC 434205 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||||||||||||||| || |||||||| ||||| ||| Sbjct 434204 ACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAACAA 434145 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG-ATTATAACGT 178102 || | || ||||| || |||||| | |||||||| || || |||| || |||| ||| | Sbjct 434144 AGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAAC-CTTGTCGGATTACAACAT 434086 Query 178103 CCAAAAAGAATCAACACTGCA 178123 |||||||||||||| ||||| Sbjct 434085 TCAAAAAGAATCAACTCTGCA 434065 Score = 161 bits (178), Expect = 2e-34 Identities = 158/201 (79%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| ||||| ||||| || |||||||| ||| || ||| Sbjct 435033 CAGATTTTCGTCAAGACCCTCACGGGAAAGACGATTACTCTCGAGGTTGAATCTTCCGAC 434974 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || ||||||||||||||||| || |||||||| ||||| ||| Sbjct 434973 ACTATCGATAATGTGAAGTCCAAGATTCAGGACAAAGAGGGTATCCCTCCAGACCAACAA 434914 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCG-ATTATAACGT 178102 || | || ||||| || |||||| | |||||||| || || |||| || |||| ||| | Sbjct 434913 AGATTGATTTTCGCTGGCAAACAGTTGGAAGATGGTAGAAC-CTTGTCGGATTACAACAT 434855 Query 178103 CCAAAAAGAATCAACACTGCA 178123 |||||||||||||| |||| Sbjct 434854 TCAAAAAGAATCAACTTTGCA 434834 Score = 109 bits (120), Expect = 1e-18 Identities = 134/182 (74%), Gaps = 1/182 (1%) Strand=Plus/Minus Query 177962 CCTCG-AGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAG 178020 ||||| |||| || || |||| ||||| || || || |||||||||||||| | Sbjct 434455 CCTCGGAGGTTTGAATCTTCGACATTATCGATAATGTGAAGTCCAAGATTCAGGACAAGG 434396 Query 178021 AAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAA 178080 | || ||||||||||| ||||| | |||||||| || || || ||| | |||||||| | Sbjct 434395 AGGGTATCCCTCCGGATCAGCAGAGGCTTATCTTTGCTGGCAAGCAGTTAGAAGATGGTA 434336 Query 178081 GGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCA 178140 | || | | ||||| ||| | |||||||||||||| |||| | || ||| | || | Sbjct 434335 GAACATTGTCTGATTACAACATTCAAAAAGAATCAACTTTGCACTTAGTCTTGCGTCTGA 434276 Query 178141 GA 178142 || Sbjct 434275 GA 434274 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || || ||||| ||||| || || || |||||||| ||| ||| ||| Sbjct 434805 CAGATTTTCGTCAAGACCCTCACGGGAAAGACAATTACTCTCGAGGTTGAATCCTCTGAC 434746 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| || || || |||||||||||||| || || Sbjct 434745 ACCATCGATAATGTGAAGTCCAAGATTCAGGACAAGGAGGG 434705 >seq8 Length=1778692 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || || || || || || |||||| | ||||| ||| || ||| Sbjct 1641297 CAGATTTTTGTCAAGACCCTTACGGGTAAGACTATCACCTTAGAGGTTGAATCTTCTGAC 1641356 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| ||||| ||||| || ||||||||| Sbjct 1641357 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAAGGTATCCCACCTGACCAGCAA 1641416 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || || | ||||||||||| ||| | |||| || ||| | Sbjct 1641417 AGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGAAGAACTTTGTCCGACTACAACATT 1641476 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| ||||| || ||||| | || |||||| | ||| Sbjct 1641477 CAAAAGGAATCCACCCTGCACTTGGTCTTGAGATTGAGA 1641515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203731076617552