Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq68 113 5e-20 >seq68 Length=1116518 Score = 113 bits (124), Expect = 5e-20 Identities = 548/860 (64%), Gaps = 15/860 (2%) Strand=Plus/Minus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| ||| || | || ||||| ||||| || || || | | ||| || || ||| Sbjct 368545 TGGTAGTCGGATACTCTCTTCTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTTTCC 368486 Query 16736 ATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||| || || || || ||| | || | | |||| | | || || | ||| | Sbjct 368485 ATGAAGTCGAATGGGTTGGTAACATTGTACACCTTTTTGT-TGCCTAAGG-CAACGAGCA 368428 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTAT-AAGA 16852 |||| || || ||||| || | ||| |||||||| || | || |||||| || | ||| Sbjct 368427 ATCTGTCGGCGACAAACTCCACATACTGGCACATCAAGTTGCTGTTCATACCCAACAAGC 368368 Query 16853 CGTACCGGAAGAGCTTCCGTCAAAAA-TCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 | | ||| | ||||| || | || || ||| || ||| || || ||| ||| Sbjct 368367 TAGATGGCAAG-GAATCCGTGAAGTACTCCTT-CTCAATGGAAACAGCCTCGGTAACAAT 368310 Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971 || | || || | || ||| | | ||| | || |||| || ||| || || Sbjct 368309 TCTCTCGACAATTTTTTGGGCGGGTCTGTTTTTCAAGTGCGAGAACAACAAACAAGCAAA 368250 Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031 || || || |||||||| | || || | ||||| ||||| || | || ||||| Sbjct 368249 GTCAGTGTGCAAGCCCTCGTCACGGCAAATCAACTCGTTTGAAAACGTGAGGCCAGGCAT 368190 Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091 | |||| ||||||||||| || |||| ||| || || || || || || | |||||| Sbjct 368189 CAAGCCTCTCTTCTTTAACCAGAAGATCGAGGCAAATGAGCCTGAGAAAAAGACACCCTC 368130 Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151 |||| || || || | |||| ||| | || || || || | || ||||| | Sbjct 368129 AACGGCAGCGAAGGCAACCAATCTCTCGCCAAACAAGGCCTCCTTATCACTGATCCACCT 368070 Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTT 17211 | |||| |||||||||| ||| || || || | || || || ||||| || Sbjct 368069 CAAGGCCCAATCGGCTTTTTTCTTGATACATGGGATGTTGTCAATTGCATTAAACAAGAA 368010 Query 17212 CTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTG 17271 || ||||| |||| | || || || || || | | | ||| | || || || Sbjct 368009 GTCGGATTCCTTGGGGTCCTTGATGTAGGTGTCAATCAACAAGGAGTAGGTCTCCGAATG 367950 Query 17272 TATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTC 17331 || |||||||| ||||| ||||| || ||||| || || | || || || || Sbjct 367949 AATATTCTCCATCATGATCTGGAATCCATAGAAGCACTTTGCCTCAGGGATCTGCACCTC 367890 Query 17332 CACGTAGAATCG--TTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAAC 17389 | |||| | ||| | | |||||||| ||||| ||||| || || || || Sbjct 367889 --GGAAGAAAAGTTTTCTACCAAGTTTTCGTTGACGATTCCGTCAGAGGCAGCAAAGAAG 367832 Query 17390 GCCAATATATGCTTAATGAAATATTTTTC---GTCCGGTGTAAGAACGCGCCAGTCCTTT 17446 ||||| | | || |||||| | | || ||| | | | |||||| || Sbjct 367831 GCCAACACACGCGAGATGAAAAACCTCTCATTGTCGGTCATTTTGTTGTTCCAGTCGTTG 367772 Query 17447 AAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATAC 17506 | || ||||| | || | || |||| |||||| ||| ||| | || || || ||| Sbjct 367771 ATGTCCTTGGACAAGTCGATCTCCTCGGCGGTCCAGAAAGACGCCTCGGCTTTCTTGTAC 367712 Query 17507 ATATTCCAAATATCATTGTA 17526 || | ||| | |||| ||| Sbjct 367711 ATCTGCCAGACTTCATGGTA 367692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517544603724720