Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq68 188 8e-43 seq73 141 1e-28 >seq68 Length=1116518 Score = 188 bits (208), Expect = 8e-43 Identities = 561/859 (65%), Gaps = 10/859 (1%) Strand=Plus/Minus Query 23865 TTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTG 23924 || ||||| || || || ||||| | || || || ||||||||||| ||| |||| ||| Sbjct 368527 TTCTCGAAGAAGTTGGTCTTACCAGCCAAAGAAATGTTTTCCATGAAGTCGAATGGGTTG 368468 Query 23925 GTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCC 23984 |||||||| || | |||| || || || | |||||| || |||||||||||| Sbjct 368467 GTAACATTGTACACCTTTTTGTTGCCTAAGGCAACGAGCAATCTGTCGGCGACAAACTCC 368408 Query 23985 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGT- 24043 | ||| ||||| | | ||||| || | | || ||| | | | || Sbjct 368407 ACATACTGGCACATCAAGTTGCTGTTCATACCCAACAAGCTAGATGGCAAGGAATCCGTG 368348 Query 24044 AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTT-ACTGTTTCTTCAC 24102 ||| | | ||| | |||| || || || || || | ||| ||| || ||| || Sbjct 368347 AAGTACTCCTTCT-CAATGGAAACAGCCTCGGTAACAATTC-TCTCGACAATTTTTTGGG 368290 Query 24103 TCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGT 24162 ||| | || || |||| |||||| || || || ||| | ||||||| Sbjct 368289 CGGGTCTGTTTTTCAAGTGCGAGAACAACAAACAAGCAAAGTCAGTGTGCAAGCCCTCGT 368230 Query 24163 CTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCC 24222 | | | ||| || ||||| ||||||||||| || ||||| | ||| | ||| || | || Sbjct 368229 CACGGCAAATCAACTCGTTTGAAAACGTGAGGCCAGGCATCAAGCCTCTCTTCTTTAACC 368170 Query 24223 AAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAA 24282 | || || || |||||||| || || || || | || || || || || ||||||| | Sbjct 368169 AGAAGATCGAGGCAAATGAGCCTGAGAAAAAGACACCCTCAACGGCAGCGAAGGCAACCA 368110 Query 24283 GTCTTTCTCCATAACCGG---CGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCT 24339 ||| || ||| | || | | ||| |||||| | ||||||||||| || | Sbjct 368109 ATCTCTCGCCAAACAAGGCCTCCTTATCACTGATCCACCTCAAGGCCCAATCGGCTTTTT 368050 Query 24340 TTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTT 24399 | || | ||| || || | || || |||||||| | ||| ||| || || | Sbjct 368049 TCTTGATACATGGGATGTTGTCAATTGCATTAAACAAGAAGTCGGATTCCTTGGGGTCCT 367990 Query 24400 TAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTT 24459 | | || || |||||||| | || | ||||||||||| || || || || | Sbjct 367989 TGATGTAGGTGTCAATCAACAAGGAGTAGGTCTCCGAATGAATATTCTCCATCATGATCT 367930 Query 24460 GAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTA 24519 | ||||| ||||| || | ||||| | ||||| || || | |||| |||| | | Sbjct 367929 GGAATCCATAGAAGCACTTTGCCTCAGGGATCTGCACCTCGGAAGAAAAGTTTTCTACCA 367870 Query 24520 AATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT 24579 | ||||| || || ||||||||| ||| ||||| || ||||| ||| | || ||| Sbjct 367869 AGTTTTCGTTGACGATTCCGTCAGAGGCAGCAAAGAAGGCCAACACACGCGAGATGAAAA 367810 Query 24580 ATTTTTC---GTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTT 24636 | | || ||| | || || ||||| || ||||| || || || | || | | Sbjct 367809 ACCTCTCATTGTCGGTCATTTTGTTGTTCCAGTCGTTGATGTCCTTGGACAAGTCGATCT 367750 Query 24637 CTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATT 24696 | || | ||||| || || ||||| || || || ||||| | ||||| ||||| || | Sbjct 367749 CCTCGGCGGTCCAGAAAGACGCCTCGGCTTTCTTGTACATCTGCCAGACTTCATGGTACT 367690 Query 24697 GAATTGGAAAAATAACAAA 24715 || ||||| | ||||| Sbjct 367689 TGATAGGAAACAACACAAA 367671 >seq73 Length=169253 Score = 141 bits (156), Expect = 1e-28 Identities = 721/1136 (63%), Gaps = 20/1136 (2%) Strand=Plus/Minus Query 53781 ACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAA 53840 ||||||| | || || || | ||| || |||||| ||| ||||| ||||| || | | Sbjct 116859 ACTTGATCATACCCAAGTTCTTTTGGTTGGTCTTTTCGTTGCACGCGTCCTTGTACAACA 116800 Query 53841 TGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCT 53900 | ||||| || || ||||| |||| | ||| | || || | ||||| | |||| Sbjct 116799 TAAATGGAGTGCCGGTTTCGGTCTGCGCTTCCAAGATGGCGTACCAGAGCTTTTGTGCCT 116740 Query 53901 TTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGT 53960 | | ||||| || | ||||| |||||| || || || ||||||| Sbjct 116739 TCACGGTAGATCTGCCGCGGCCCTCTCTCTCGTATTTCTCGTATAAGGCCTCGAACTCGT 116680 Query 53961 CTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGT 54020 | || | | ||| ||| | || | ||| | | ||| | ||| || || | Sbjct 116679 CACCGTAGCACTCAGGCAAACCACGGGCCTCGTTTGGAGAGAACAAGGTCCAGTCACCAT 116620 Query 54021 CATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGG 54080 | | | |||| ||||| || | || || |||||||| || || | ||||||| Sbjct 116619 CTTGTTCGACTCTCTTCATGAACAAGTCCGGGATCCAAAGCGCAGGGAACAAGTCTCTGG 116560 Query 54081 TTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 54140 ||| | ||| || || || |||||| | | |||| || | | || || | | Sbjct 116559 CTCTGTTTTCTTCTTTGCCGTGGTTCTTTCTGATGTCGATAAAATCAAAGATGTCCGCGT 116500 Query 54141 GCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGT 54200 |||| || ||||| || | || | | ||||| | ||||| |||||||| || | | Sbjct 116499 GCCATGGCTCCAAATAGAGGGCAAAGGCACCAGGTCTCTTGTTACCTCCCTGGTCAACAT 116440 Query 54201 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGG 54260 | | ||||| || || | || | || ||| ||||| ||||| ||||| | || |||| Sbjct 116439 AACGTGCGGTATTGTTGAAGACACGCACCATAGGAATGATACCGTTGGACGTTCCGTTGG 116380 Query 54261 TCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAAT-TGATAGACCTATCCCCCCT 54319 | || | || ||| ||| ||| | || || || || || || || || || Sbjct 116379 TACCAGCAATGTAGGCTCCGGTGGACCTGATGTTGTGTATGTGCAAG-CCAATACCGCCG 116321 Query 54320 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 54379 || ||| ||||| || || || || || || || ||||| || || || || Sbjct 116320 GCAGATTTGGAGATCAAGGCACAGGTCTTCAAGGTGTCGTAGATTCCGTCGATGGAGTCG 116261 Query 54380 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 54439 ||| ||||| | || ||||| ||||||||| | | || || || || || Sbjct 116260 TCCTTCATGGCGACGAGGAAACACGACGACATTTGGGGGCTTGGCGTGCCTGCGTTGAAA 116201 Query 54440 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCT 54499 | || || || ||||||| || | || | | ||||| |||||||| | Sbjct 116200 AGCGTGGGGGAGCCGTGCGTGAAGTAGCGCAGCGACATCATGTTGTAAGTCTCGATGACA 116141 Query 54500 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 54559 | || |||| || || || |||||||||||||| | || |||||| || || Sbjct 116140 CGGGGAATGTCCCTGCCGTGGATGCCCACTGCGACACGCATAAGCAAGTGCTGCGGCCTC 116081 Query 54560 TCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 54619 || ||| || ||| | ||| |||||||| || |||||| || || || ||||| Sbjct 116080 TCGGCGACGCTGCCGTTCACTTTGAGCAAGTACGACCGTTCCAAGGTCTTGAATCCAAAG 116021 Query 54620 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTG 54679 ||||||| ||||| || ||||| | ||| | |||||||| || | | | || Sbjct 116020 AAGTTGTAGTTGAAGTCGCGGTCGTACACAATGGCAGAGTTGAG---CTCGTCAGAGTTC 115964 Query 54680 T--TAACTACATCCATGGTAA---TACTT-GAAATAATCGGAGAATGTTTCCCATTTTTA 54733 | || || || | |||| | ||| || || || ||||| |||| | |||| Sbjct 115963 TCACAAATA-AT--GTCGTAAGTCTCCTTCGATATCATGGGAGAGTGTTGGTCTGTTTTT 115907 Query 54734 GGATTGACATAGTTAAATAAATCCTTCATCACTTCACT--AAATAGtttttttGTTTCTT 54791 || |||| || | | ||| |||| ||| || | ||| | ||| | || | | Sbjct 115906 GGGTTGATGTACTCGTACAAAATTTTCAGCAC--CAGTGAAAACTGCTTTGTCGTCTGCT 115849 Query 54792 TGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAG 54851 |||| | ||| || ||||| ||||| ||||| | || || ||||| ||||| || | Sbjct 115848 TGTGCAAATTGGACACGGCAATTCTTGCGGCCAAGATCGCGTAATCTGGATGAATCGTGG 115789 Query 54852 TACAAGT-GGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCC 54906 | || || ||| || | ||||| | | | |||||||||||| || | ||||| Sbjct 115788 T-CATGTAGGCGGCAGTCTCGGCGGCTAAATTGTCCAATTCTATAGTGTTGACTCC 115734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720457085920