Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Metschnikowia_20australis_20[genbank_20GCA_5F002073855.1_202017-03- 29] 154 sequences; 14,350,841 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq68 237 2e-57 seq79 122 9e-23 seq96 118 1e-21 seq91 107 2e-18 >seq68 Length=1116518 Score = 237 bits (262), Expect = 2e-57 Identities = 430/624 (69%), Gaps = 9/624 (1%) Strand=Plus/Plus Query 116591 GAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTAC 116650 |||||| ||||| || ||| | || || || | |||| || | |||| |||||| Sbjct 367656 GAGAACAAGCGCCGTTTTGTGTTGTTTCCTATCAAGTACCATGAAGTCTGGCAGATGTAC 367715 Query 116651 AAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGC 116710 || || ||||||||||| |||||||||| ||||||| | ||| |||||||||||| | | Sbjct 367716 AAGAAAGCCGAGGCGTCTTTCTGGACCGCCGAGGAGATCGACTTGTCCAAGGACATCAAC 367775 Query 116711 GACTGGGAGCGC---TTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTT 116767 |||||| | | ||| |||||| ||| | ||||||| || ||| ||||||| Sbjct 367776 GACTGGAACAACAAAATGACCGACAATGAGAGGTTTTTCATCTCGCGTGTGTTGGCCTTC 367835 Query 116768 TTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTG 116827 || || ||| ||||| ||||||||||| || |||| || || || |||||| Sbjct 367836 TTTGCTGCCTCTGACGGAATCGTCAACGAAAACTTGGTAGAAAACTTTTCTTCCGAGGTG 367895 Query 116828 CAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCG 116887 ||| | | ||||| ||||||||| || || |||||| |||||||| | || ||| Sbjct 367896 CAGATCCCTGAGGCAAAGTGCTTCTATGGATTCCAGATCATGATGGAGAATATTCATTCG 367955 Query 116888 GAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGT-TT 116946 || | || || | || ||||| ||| | | |||| | | | | || Sbjct 367956 GAGACCTACTCCTTGTTGATTGACACCTACATCAAGGACCCCAAGGA-ATCCGACTTCTT 368014 Query 116947 GTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTG 117006 ||| || || || || | || || || |||| | || ||||| ||||| || | || Sbjct 368015 GTTTAATGCAATTGACAACATCCCATGTATCAAGAAAAAAGCCGATTGGGCCTTGAGGTG 368074 Query 117007 GATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGG 117066 |||| | | |||||| || |||||| | |||| |||||||| ||||| ||||| Sbjct 368075 GATCAGTGATAAGGAGGCCTTGTTTGGCGAGAGATTGGTTGCCTTCGCTGCCGTTGAGGG 368134 Query 117067 CGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCC 117126 ||||| || || ||| || ||| | || || ||| | ||||| | ||| | ||||| Sbjct 368135 TGTCTTTTTCTCAGGCTCATTTGCCTCGATCTTCTGGTTAAAGAAGAGAGGCTTGATGCC 368194 Query 117127 CGGCCTGAC--TTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTT 117184 ||||| || ||||| |||||| | || | | | |||||||| |||| |||||| Sbjct 368195 TGGCCTCACGTTTTCA--AACGAGTTGATTTGCCGTGACGAGGGCTTGCACACTGACTTT 368252 Query 117185 GCCTGTTTGCTGTTCAAGCATTTG 117208 || |||||| ||||| ||| ||| Sbjct 368253 GCTTGTTTGTTGTTCTCGCACTTG 368276 >seq79 Length=900310 Score = 122 bits (134), Expect = 9e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || | ||||| || |||||||| | || ||||| ||| || Sbjct 649329 ATGCAAATCTTCGTCAAGACCTTAACGGGTAAGACCATCACTTTGGAGGTCGAGGCCTCC 649388 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || || | ||||| || || || || | |||||| Sbjct 649389 GACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGAATTCCACCTGACCAG 649448 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| || | |||| ||| || || ||| |||| |||| | ||| | ||||||||| Sbjct 649449 CAAAGATTGATCTTCGCTGGTAAGCAGTTGGAGGACGGCAGAACCTTGTCTGACTACAAC 649508 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGG 40919 |||||||||||| ||||| ||||| | || | | ||||| || || || Sbjct 649509 ATCCAGAAGGAGTCCACGTTGCATTTGGTCCTCAGATTGAGAGGTGGTGG 649558 >seq96 Length=44914 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| ||||| ||||| || || || || || ||||| |||| ||||| ||| Sbjct 262 AAAATGCAAATCTTCGTCAAAACACTAACCGGAAAGACAATCACACTCGAGGTCGAGGCC 203 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | |||| | || |||| || || |||||||| || | ||| Sbjct 202 TCGGACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGCATTCCACCAGAC 143 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || ||| || | |||| ||| || || || |||| |||| | || | ||||||| Sbjct 142 CAACAAAGATTGATCTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCCGACTAC 83 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 ||||||||||||||| |||| ||||| | ||| Sbjct 82 AACATCCAGAAGGAGTCCACATTGCATTTGGTG 50 >seq91 Length=77570 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || | || || || || ||||| |||| ||||| ||| | Sbjct 186 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACAATCACACTCGAGGTCGAGGCCTCG 245 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| | || |||| || || |||||||| || | ||||| Sbjct 246 GACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGCATTCCACCAGACCAA 305 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| || | |||| ||| || || || |||| |||| | || | |||||||||| Sbjct 306 CAAAGATTGATCTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCCGACTACAAC 365 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| |||| ||||| | ||| | | |||||||| || Sbjct 366 ATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTGAGGGGTGG 412 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || | || || || || ||||| |||| ||||| ||| | Sbjct 414 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACAATCACACTCGAGGTCGAGGCCTCT 473 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| | || |||| || || |||||||| || | ||||| Sbjct 474 GACACCATTGATAATGTCAAAGCCAAGATTCAAGATAAGGAGGGCATTCCACCAGACCAA 533 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||| || | || | ||| || || || |||| |||| | || | ||||||||| Sbjct 534 CAAAGATTGATTTTCGCCGGTAAGCAATTGGAGGACGGCAGAACATTGTCTGACTACAAC 593 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| |||| ||||| | ||| | | ||||| ||||| Sbjct 594 ATCCAGAAGGAGTCCACATTGCATTTGGTGCTCAGATTGAGAGGCGG 640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218208203040